New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6127506 =	71 (0.970)	4 (0.060)	4/234	NT	6.0%	coding (435/909 nt)	PP_5375	LysR family transcriptional regulator
	?	NC_002947	6127531 =	59 (0.860)					coding (410/909 nt)	PP_5375	LysR family transcriptional regulator

GCCAGAGCCAGGTACACGACGACAACCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTGAC  >  NC_002947/6127358‑6127652                                                                                                                                                      |                                                                                                                                                     gccagagccagGTACACGACGACAACCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAg‑cg                                                                                                                                                     >  1:1788100/1‑150 (MQ=255)   cagagccagGTACACGACGACAACCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGcc                                                                                                                                                   >  2:1446530/1‑150 (MQ=255)     gagccagGTACACGACGACAACCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAg                                                                                                                                                 >  2:453960/1‑150 (MQ=255)      agccagGTACACGACGACAACCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAgg                                                                                                                                                >  1:1187622/1‑150 (MQ=255)            gTACACGACGACAACCCTTCGACGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCCGGAAGAGTTCTTCCGAGAACAGCGGCGTGACAGCCATGTTCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTg                                                                                                                                        >  1:1815144/1‑150 (MQ=255)              acacGACGACAACCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATGTCTTCCGAGAACAGCGGCGTGACCGCCAGGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTc                                                                                                                                      <  1:1694977/150‑1 (MQ=255)                acgacgACAACCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGa                                                                                                                                    >  2:1473298/1‑150 (MQ=255)                acaacgacAAACCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGAGAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGTCACGTTCGTGGGCGTTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGa                                                                                                                                    >  2:1876406/4‑150 (MQ=255)                 gcaaccaacaagtcaccgttgccaccagtaccgccatggcgtcgctgtggttactgcccaaggtgtcggaattccagagtgcccatgaaaacatcgacctgcggatcatcgcccacgatcatgtgaaggattaCGCCAGG‑TCG‑CTGTCGa                                                                                                                                    <  2:1502884‑M1/17‑1 (MQ=255)                  gacgacAACCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCATGAAGATGTCTGCCCCGACCAGCGGCATGACAGCCCTGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTTGAGc                                                                                                                                  <  1:1892596/150‑1 (MQ=255)                   acgacAACCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGcc                                                                                                                                 >  2:667677/1‑150 (MQ=255)                     gacAACCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTg                                                                                                                               <  1:315107/150‑1 (MQ=255)                      acAACCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTgg                                                                                                                              <  2:44782/150‑1 (MQ=255)                       cAACCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGc                                                                                                                             <  2:617809/150‑1 (MQ=255)                       cAACCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGc                                                                                                                             <  1:472794/150‑1 (MQ=255)                        aaCCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCg                                                                                                                            >  1:156279/1‑150 (MQ=255)                          cccTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTa                                                                                                                          >  2:1211684/1‑150 (MQ=255)                           ccTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTaa                                                                                                                         <  2:1187622/150‑1 (MQ=255)                           ccTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTaa                                                                                                                         >  1:1586596/1‑150 (MQ=255)                             ttCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATc                                                                                                                       <  1:667677/150‑1 (MQ=255)                                gATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCtt                                                                                                                    <  2:156279/150‑1 (MQ=255)                                       ctCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGGGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGGTGCAGTAGTAAAA‑CTTCGGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACCTGa                                                                                                             >  1:1071770/1‑150 (MQ=255)                                       ctCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑GGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGa                                                                                                             >  1:1071675/1‑150 (MQ=255)                                       ctCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGa                                                                                                             <  1:1473298/150‑1 (MQ=255)                                            ttGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTg                                                                                                        <  1:1185987/150‑1 (MQ=255)                                              gCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTggg                                                                                                      <  1:649568/150‑1 (MQ=255)                                               cGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGc                                                                                                     <  2:155443/150‑1 (MQ=255)                                                      cTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAACGACACCCTG‑‑CT‑CGGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATc                                                                                              >  2:543653/1‑150 (MQ=255)                                                       tGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTgg                                                                                                       <  2:1259606/140‑1 (MQ=255)                                                       tGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTgg                                                                                                       >  1:1259606/1‑140 (MQ=255)                                                         gCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCGGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAATG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGc                                                                                           >  2:1329581/1‑150 (MQ=255)                                                             gATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCCTG‑GCG‑CTTGCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGt                                                                                       <  2:958284/150‑1 (MQ=255)                                                                tggCCAGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGa                                                                                    <  1:541469/149‑1 (MQ=255)                                                                  gCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACAt                                                                                                               >  2:1033880/1‑121 (MQ=255)                                                                  gCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACAt                                                                                                               <  1:1033880/121‑1 (MQ=255)                                                                  gCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATg                                                                                  >  1:409270/1‑150 (MQ=255)                                                                    tactgcccaaggtgtcggaattccagagtgcccatgaaaacatcgacctgcggatcatcgcccacgatcatgtgaaggattaCGcc                                                                                                                                                   <  1:839821‑M1/4‑1 (MQ=255)                                                                    tactgcccaaggtgtcggaattccagagtgcccatgaaaacatcgacctgcggatcatcgcccacgatcatgtgaaggattaCGcc                                                                                                                                                   >  2:839821‑M1/83‑86 (MQ=255)                                                                          gCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATg                                                                          <  1:1446530/150‑1 (MQ=255)                                                                            acacCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTc                                                                                                                   >  2:885958/1‑107 (MQ=255)                                                                            acacCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTc                                                                                                                   <  1:885958/107‑1 (MQ=255)                                                                              acCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATc                                                                                                           <  1:375455/113‑1 (MQ=255)                                                                              acCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATc                                                                                                           >  2:375455/1‑113 (MQ=255)                                                                              acCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGTTGGTCCGCAGGTCGATGTTTTCATGGGCa                                                                      <  1:543653/150‑1 (MQ=255)                                                                              acCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCa                                                                      <  1:453960/150‑1 (MQ=255)                                                                                cAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGttt                                                                               >  2:1420325/1‑139 (MQ=255)                                                                                cAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGttt                                                                               <  1:1420325/139‑1 (MQ=255)                                                                                   gAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTg                                                                 >  2:1559338/1‑150 (MQ=255)                                                                                        tttCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGCCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAAtt                                                            >  1:34079/1‑150 (MQ=255)                                                                                          ccagagtgcccatgaaaacatcgacctgcggatcatcgcccacgatcatgtgaaggattaCGCCa                                                                                                                                                  >  2:8459‑M1/61‑65 (MQ=255)                                                                                          ccagagtgcccatgaaaacatcgacctgcggatcatcgcccacgatcatgtgaaggattaCGCCa                                                                                                                                                  <  1:8459‑M1/5‑1 (MQ=255)                                                                                            ttcCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGa                                                        >  2:1151226/1‑150 (MQ=255)                                                                                               cGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGacac                                                     <  2:1788100/150‑1 (MQ=255)                                                                                                gagaACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGt                                                                                                                                       >  2:1898940/1‑67 (MQ=255)                                                                                                gagaACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGt                                                                                                                                       <  1:1898940/67‑1 (MQ=255)                                                                                                     cAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTggg                                               <  1:1876406/150‑1 (MQ=255)                                                                                                       gcggcgTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCa                                             <  2:34079/150‑1 (MQ=255)                                                                                                       gcggcgTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCa                                             <  2:1889561/150‑1 (MQ=255)                                                                                                          gcgTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGc                                                                       >  2:1650057/1‑121 (MQ=255)                                                                                                          gcgTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGc                                                                       <  1:1650057/121‑1 (MQ=255)                                                                                                                     aTGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGAc                               <  2:1815144/150‑1 (MQ=255)                                                                                                                       gTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTcc                                                          <  2:911281/121‑1 (MQ=255)                                                                                                                       gTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTcc                                                          >  1:911281/1‑121 (MQ=255)                                                                                                                       gTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCa                                             >  1:1923894/1‑134 (MQ=255)                                                                                                                       gTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCa                                             <  2:1923894/134‑1 (MQ=255)                                                                                                                          tcatcgcccacgatcatgtgaaggattaCGCCAGGCTCGACAG‑CGA‑CCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCa                           <  1:1502884‑M1/122‑1 (MQ=255)                                                                                                                          cTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATc                                                                                              >  2:1861003/1‑82 (MQ=255)                                                                                                                          cTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATc                                                                                              <  1:1861003/82‑1 (MQ=255)                                                                                                                          cTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCAt                          >  2:552053/1‑150 (MQ=255)                                                                                                                          cTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCAt                          >  1:896854/1‑150 (MQ=255)                                                                                                                             gggCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGc                       <  2:1586596/150‑1 (MQ=255)                                                                                                                                    gggTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACtg                <  1:1151226/150‑1 (MQ=255)                                                                                                                                       ttGCAGTAGTAAGG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGGGACGCCATGGCGGTACtggtg             <  1:1329581/150‑1 (MQ=255)                                                                                                                                           agtagtAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCaa         >  1:1588644/1‑150 (MQ=255)                                                                                                                                            gtagtaAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAAc        >  2:1764005/1‑150 (MQ=255)                                                                                                                                             tagtaAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGc                                                                                                     >  1:257860/1‑56 (MQ=255)                                                                                                                                             tagtaAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGc                                                                                                     <  2:257860/56‑1 (MQ=255)                                                                                                                                             tagtaAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACg       >  1:371935/1‑150 (MQ=255)                                                                                                                                             gaaggattaCGCCAGGCTCGACAG‑CGA‑CCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTggg                                               >  2:227246‑M1/10‑111 (MQ=255)                                                                                                                                             gaaggattaCGCCAGGCTCGACAG‑CGA‑CCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTggg                                               <  1:227246‑M1/102‑1 (MQ=255)                                                                                                                                              agtaAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACgg      >  1:1311883/1‑150 (MQ=255)                                                                                                                                                taAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGGTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTg    >  1:135127/1‑150 (MQ=255)                                                                                                                                                 cagg‑cgcCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTGa   >  1:795997/4‑150 (MQ=255)                                                                                                                                                  aaG‑CGGCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTGAc  <  1:1043929/150‑1 (MQ=255)                                                                                                                                                  aaG‑CGCCAGG‑TCG‑CTGTCGAGCCTTGCGTAATGCTTCACATGATCGTGGGCGAGGATTCGCGGGCCGATGTGTTCGTGGGCACTCTGGAATTCGGAAACCTTGGGCAGTAACGACAGAGACGCCAGGGCGGTACTGGGGGCAACGGTGaa  >  1:940322/1‑149 (MQ=255)                                                                                                                                                  aaG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTGATGGGCACTTTGGAATTCCGACACTTTGGGCAGTAACTACAGGGGCGCCATGCCTGTACCGGTGGCAACGGTGAc  >  2:678485/1‑150 (MQ=255)                                                                                                                                                  aaG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTGAc  <  1:1764005/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     GCCAGAGCCAGGTACACGACGACAACCCTTCGATGCTGCTCAGTTGCGGATGCCTGGCCAGATAGGCCGGGCTGCACACCAGGAAGATTTCTTCCGAGAACAGCGGCGTGACAGCCATGTCCTTGGGCGGTGGGTTGCAGTAGTAAAG‑CGCCAGG‑TCG‑CTGTCGAGCCTGGCGTAATCCTTCACATGATCGTGGGCGATGATCCGCAGGTCGATGTTTTCATGGGCACTCTGGAATTCCGACACCTTGGGCAGTAACCACAGCGACGCCATGGCGGTACTGGTGGCAACGGTGAC  >  NC_002947/6127358‑6127652

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.