New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 257716784 (1.150)8 (0.120) 5/226 NT 8.7% coding (1271/1776 nt) PP_2259 sigma‑54 dependent transcriptional regulator
?NC_002947 = 2577215 92 (1.380)coding (1223/1776 nt) PP_2259 sigma‑54 dependent transcriptional regulator

Only 100 of 113 total aligned reads displayed.

GTTCGCGCAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCG  >  NC_002947/2577018‑2577316
                                                                                                                                                     |                                                                                                                                                     
gTTCGCGCAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCA                                                                                                                                                       >  1:1055708‑M1/1‑150 (MQ=255)
      gcAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGCCACCCCGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCt                                                                                                                                                 <  2:609293/150‑1 (MQ=255)
      gcAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCt                                                                                                                                                 <  1:908958/150‑1 (MQ=255)
         ggggAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGa                                                                                                                                              <  1:963406/150‑1 (MQ=255)
         ggggAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGa                                                                                                                                              <  1:1862777/150‑1 (MQ=255)
                cagcaCCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGAtgctgct                                                                                                                                       <  1:204252/150‑2 (MQ=255)
                 agcaCCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTgcgc                                                                                                                                      >  2:381743/1‑150 (MQ=255)
                  gcaCCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGcgcg                                                                                                                                     >  2:1533328/1‑150 (MQ=255)
                     ccAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACt                                                                                                                                  <  1:756598/150‑1 (MQ=255)
                      cAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTg                                                                                                                                 <  2:1509120/150‑1 (MQ=255)
                      cAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTg                                                                                                                                 >  2:1016806/1‑150 (MQ=255)
                        gCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCa                                                                                                                               <  1:640086/150‑1 (MQ=255)
                          gTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGt                                                                                                                             <  2:97421/150‑1 (MQ=255)
                           tCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCGGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTa                                                                                                                            >  1:259839/1‑150 (MQ=255)
                                ccGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACgcgc                                                                                                                       >  2:1659787/1‑150 (MQ=255)
                                ccGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTAGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACgcgc                                                                                                                       >  1:1764236/1‑150 (MQ=255)
                                 cGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCgca                                                                                                                      >  2:1784588/1‑150 (MQ=255)
                                         cGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCgg                                                                                                              <  1:1659787/150‑1 (MQ=255)
                                         cGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCgg                                                                                                              <  2:453650/150‑1 (MQ=255)
                                               taCAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCtgg                                                                                                        <  1:333154/150‑1 (MQ=255)
                                                 cAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGt                                                                                                      <  1:844604‑M2/150‑2 (MQ=255)
                                                    gTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtggg                                                                                                   >  1:801982‑M2/1‑146 (MQ=255)
                                                       cTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAgcggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtg                                                                                                <  2:1656193‑M1/150‑56 (MQ=255)
                                                        tGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGAtgctgc                                                                                                                                        >  2:1724173/1‑109 (MQ=255)
                                                        tGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGAtgctgc                                                                                                                                        <  1:1724173/109‑1 (MQ=255)
                                                         ggCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTTGCCACTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtg                                                                                              <  1:1059267‑M1/150‑58 (MQ=255)
                                                         ggCGAAAGCGCACGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtg                                                                                              <  1:1298521‑M1/150‑58 (MQ=255)
                                                             aaaGCGCCCGGCGCGCACTTCGTCGGCCAGGCTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCAt                                                                                          <  2:1124392/150‑1 (MQ=255)
                                                                   cccGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGcc                                                                                    <  1:381743/150‑1 (MQ=255)
                                                                    ccGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGc                                                                                                            >  1:831542/1‑125 (MQ=255)
                                                                    ccGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGc                                                                                                            <  2:831542/125‑1 (MQ=255)
                                                                    ccGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCa                                                                                   <  2:444728/150‑1 (MQ=255)
                                                                    ccGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGCGGGCAGTGGCATGTCGCCa                                                                                   >  2:1308848/1‑150 (MQ=255)
                                                                      ggCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGa                                                                                                                                              >  2:1785002/1‑89 (MQ=255)
                                                                      ggCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGa                                                                                                                                              <  1:1785002/89‑1 (MQ=255)
                                                                      ggCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAAt                                                                                 <  1:163307/150‑1 (MQ=255)
                                                                         gcgcACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTTGCCACTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggt                                                                              <  2:1445394‑M1/150‑74 (MQ=255)
                                                                           gcACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCAt                                                                            >  1:1584589/1‑150 (MQ=255)
                                                                              cTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCa                                                                         >  1:406519/1‑150 (MQ=255)
                                                                               ttCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGc                                                                                                            >  2:1447116/1‑114 (MQ=255)
                                                                               ttCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGc                                                                                                            <  1:1447116/114‑1 (MQ=255)
                                                                                      gCCAGGTTGCGATTGCTCGCCGACACCACGCGGATAGCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAgg                                                                 >  1:375542/1‑150 (MQ=255)
                                                                                           gTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGcc                                                            <  1:428761/150‑1 (MQ=255)
                                                                                            ttGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCg                                                           <  1:414744/150‑1 (MQ=255)
                                                                                            ttGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCg                                                           >  2:1820947/1‑150 (MQ=255)
                                                                                                 aTTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgct                                                                                                      >  2:1783049‑M1/1‑53 (MQ=255)
                                                                                                 aTTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgct                                                                                                      <  1:1783049‑M1/102‑50 (MQ=255)
                                                                                                     cTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtggg                                                                                                   >  2:1769933‑M2/1‑97 (MQ=255)
                                                                                                      tCGCCGACACCACGCGGATATCCACCGGCACCGGTTTGCCACTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtg                                                                                              >  1:1719912‑M1/1‑48 (MQ=255)
                                                                                                      tCGCCGACACCACGCGGATATCCACCGGCACCGGTTTGCCACTGCCCAcccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtg                                                                                              <  2:1719912‑M1/105‑58 (MQ=255)
                                                                                                      tCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCt                                                 >  2:1774841/1‑150 (MQ=255)
                                                                                                      tCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCt                                                 >  2:1510013/1‑150 (MQ=255)
                                                                                                      tCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCt                                                 >  2:1255048/1‑150 (MQ=255)
                                                                                                         ccGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGc                                              <  2:1690150/150‑1 (MQ=255)
                                                                                                         ccGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGc                                              <  1:1272995/150‑1 (MQ=255)
                                                                                                                cacGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGACAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAg                                       >  1:752548/1‑150 (MQ=255)
                                                                                                                 acGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGc                                                                                     >  1:627137/1‑103 (MQ=255)
                                                                                                                 acGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGt                                      >  1:203053/1‑150 (MQ=255)
                                                                                                                   gcgGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAAtc                                                                                <  2:1546631/106‑1 (MQ=255)
                                                                                                                   gcgGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAAtc                                                                                >  1:1546631/1‑106 (MQ=255)
                                                                                                                   gcgGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTcc                                    >  2:392313/1‑150 (MQ=255)
                                                                                                                    cgGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTccc                                   <  1:1016806/150‑1 (MQ=255)
                                                                                                                      gATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCgg                                 <  2:78038/150‑1 (MQ=255)
                                                                                                                            caccggcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGcc                           <  1:1533328/150‑1 (MQ=255)
                                                                                                                             accggcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtgggcagtggcaaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgc                          <  2:1445394‑M2/150‑78 (MQ=255)
                                                                                                                             accggcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCg                                  <  1:106999/142‑1 (MQ=255)
                                                                                                                             accggcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCg                                  >  2:106999/1‑142 (MQ=255)
                                                                                                                             accggcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGccc                          <  1:290902/150‑1 (MQ=255)
                                                                                                                                ggcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGtt                              <  2:1282914/143‑1 (MQ=255)
                                                                                                                                 gcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTtgt                      >  1:596315/1‑150 (MQ=255)
                                                                                                                                 gcaccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTtgt                      <  2:830255/150‑1 (MQ=255)
                                                                                                                                  caccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTtgtg                     <  2:1294366/150‑1 (MQ=255)
                                                                                                                                    ccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTgtggt                   <  2:521605/150‑1 (MQ=255)
                                                                                                                                    ccggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGAGCAGTCCCGGGTTGCCCTTgtggt                   <  2:259839/150‑1 (MQ=255)
                                                                                                                                     cggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGGCCTTgtggtg                  >  1:1217070/1‑150 (MQ=255)
                                                                                                                                     cggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTgtggtg                  <  2:596315/150‑1 (MQ=255)
                                                                                                                                      ggTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGtggtgg                 <  1:1743222/150‑1 (MQ=255)
                                                                                                                                       gTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGACAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTggg                <  2:752548/150‑1 (MQ=255)
                                                                                                                                        ttCGCCACTGCCCATCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGgc               <  1:577359/150‑1 (MQ=255)
                                                                                                                                          cGCCACTGCCCAGCGGCTGGATGCTGCGCTACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGgcgc             <  1:1580319/150‑1 (MQ=255)
                                                                                                                                           gCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCgg                                 <  2:1479320/129‑1 (MQ=255)
                                                                                                                                           gCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCgg                                 >  1:1479320/1‑129 (MQ=255)
                                                                                                                                            ccACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCg           >  2:858506/1‑150 (MQ=255)
                                                                                                                                             cACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgtgcgctttcgcc          <  1:1298521‑M2/150‑94 (MQ=255)
                                                                                                                                             cACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtgggcagtggcaaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcgcc          <  1:1059267‑M2/150‑94 (MQ=255)
                                                                                                                                             cACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtgggcagtggcaaaccggtgccggtggatatccgcgtggtgtcggcga                                                       >  1:1719912‑M2/1‑57 (MQ=255)
                                                                                                                                             cACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtgggcagtggcaaaccggtgccggtggatatccgcgtggtgtcggcga                                                       <  2:1719912‑M2/105‑49 (MQ=255)
                                                                                                                                             cACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTtg                       >  2:848923/1‑137 (MQ=255)
                                                                                                                                             cACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTtg                       <  1:848923/137‑1 (MQ=255)
                                                                                                                                             cACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAAGCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCgg          >  2:1340743/1‑150 (MQ=255)
                                                                                                                                             cACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCC‑‑GCtgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcgccag        <  2:1656193‑M2/150‑96 (MQ=255)
                                                                                                                                              aCTGCCCAcccaggcccgcctgctgcgcgactgcaggacgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcgcca         <  1:254207‑M1/150‑143 (MQ=255)
                                                                                                                                                 gCCCAGCGGCTGGATGCTGTGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGaa      <  1:903075/150‑1 (MQ=255)
                                                                                                                                                 gCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGaa      <  1:1203309/150‑1 (MQ=255)
                                                                                                                                                  cccacccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcgccaggac     >  1:801982‑M1/1‑4 (MQ=255)
                                                                                                                                                  cccacccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgag                                                      <  1:1769933‑M1/101‑98 (MQ=255)
                                                                                                                                                  cccacccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgag                                                      >  2:1769933‑M1/1‑4 (MQ=255)
                                                                                                                                                     acccaggcccgcctgctgcgcgtactgcagtcgcgcagcatccagccgctgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaatcgcaacctggccgacgaagtgcgcgccgggcgctttcgccaggacctg  <  1:844604‑M1/150‑150 (MQ=255)
                                                                                                                                                     aGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaat                                                  <  1:1783049‑M2/102‑54 (MQ=255)
                                                                                                                                                     aGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGtgggcagtggcgaaccggtgccggtggatatccgcgtggtgtcggcgagcaat                                                  >  2:1783049‑M2/1‑49 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GTTCGCGCAGGGGAGGCAGCACCAGCGTCAGGCCGGCGATGCGGTAGTACAGGTCCTGGCGAAAGCGCCCGGCGCGCACTTCGTCGGCCAGGTTGCGATTGCTCGCCGACACCACGCGGATATCCACCGGCACCGGTTCGCCACTGCCCAGCGGCTGGATGCTGCGCGACTGCAGTACGCGCAGCAGGCGGGCCTGGGTGGGCAGTGGCATGTCGCCAATCTCATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCG  >  NC_002947/2577018‑2577316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.