New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5903827 =59 (0.810)21 (0.330) 15/216 NT 28.3% intergenic (+27/+80) PP_5176/spuH hypothetical protein/spermidine/putrescine ABC transporter permease
?NC_002947 5903887 = 55 (0.870)intergenic (+87/+20) PP_5176/spuH hypothetical protein/spermidine/putrescine ABC transporter permease

Only 100 of 108 total aligned reads displayed.

TTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCTGAAGTAC  >  NC_002947/5903738‑5904033
                                                                                                                                                       |                                                                                                                                                  
ttGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCg                                                                                                                                                    >  2:790560/1‑150 (MQ=255)
    gggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcatGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTg                                                                                                                                                  >  1:1269097‑M1/88‑150 (MQ=255)
               ccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctttcgcgggcacGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGACCGCGAAAgg                                                                                                                                       >  1:752184‑M1/77‑150 (MQ=255)
                  aGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGTCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAg                                                                                                                                  >  2:1681758/1‑150 (MQ=255)
                  aGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAg                                                                                                                                  <  1:643718/150‑1 (MQ=255)
                    aaGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGt                                                                                                                                >  2:753209/1‑150 (MQ=255)
                      gTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCa                                                                                                                              <  1:1110917/150‑1 (MQ=255)
                       tctaagcgACTAGACACATTGGGATGCGGTATGGCTTTGAATCGCTGCTGCTCCTCCGATCTAGCAACACCGCCTGAGGCGGCTCACCTTAACCCTGACGGCCGCGTGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAg                                                                                                                             <  1:442846/143‑1 (MQ=255)
                         tCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCGCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGc                                                                                                                           >  1:136151/1‑150 (MQ=255)
                             ggACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGAc                                                                                                                       >  2:1752256/1‑150 (MQ=255)
                               aCTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGc                                                                                                                     >  1:1764644/1‑150 (MQ=255)
                                 tATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAg                                                                                                                   <  1:1566997/150‑1 (MQ=255)
                                  aTCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGc                                                                                                                  <  2:1072432/150‑1 (MQ=255)
                                    ccACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGGGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGccc                                                                                                                >  1:680971/1‑149 (MQ=255)
                                        aTTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTg                                                                                                            >  2:370745/1‑150 (MQ=255)
                                         ttGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTACCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTgc                                                                                                           >  2:779163/1‑150 (MQ=255)
                                            ggATGCGGTATGGGTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTACCATGTTGGTCGAGTCGATGCTGAAGGCTGTGAGGCCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGcc                                                                                                        <  1:1892779/150‑1 (MQ=255)
                                            ggATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCAGCTTCGcc                                                                                                        >  1:1299084/1‑150 (MQ=255)
                                               tGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCggg                                                                                                     >  2:827459/1‑150 (MQ=255)
                                                  ggTATGGCTTTGCATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGgcgc                                                                                                  <  2:112699/150‑1 (MQ=255)
                                                   gTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCt                                                                                                 <  2:94459/150‑1 (MQ=255)
                                                   gTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCt                                                                                                 <  2:136151/150‑1 (MQ=255)
                                                        gCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGAcc                                                                                            >  1:579608/1‑150 (MQ=255)
                                                            tGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCg                                                                                        <  1:395983/150‑1 (MQ=255)
                                                                    tGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACTCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGaa                                                                                <  2:1301384/150‑1 (MQ=255)
                                                                      cTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGc                                                                              <  1:963485/150‑1 (MQ=255)
                                                                       tGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCg                                                                             >  2:984267/1‑150 (MQ=255)
                                                                        ggAGCCTTCG‑‑CGGGCGTGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTTCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGt                                                                            >  2:180243/1‑150 (MQ=255)
                                                                        ggAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGTGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGt                                                                            <  1:1268947/150‑1 (MQ=255)
                                                                         gAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGtt                                                                           <  1:827459/150‑1 (MQ=255)
                                                                          aGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTg                                                                          <  2:1157374/150‑1 (MQ=255)
                                                                             cctttcgcggtcacgcccgctcccacagggacctcacagccttcagggttgtggtgagccctgtgggagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTgg                                                                         >  1:752184‑M2/75‑150 (MQ=255)
                                                                             cTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCt                                                                       <  1:370745/150‑1 (MQ=255)
                                                                              ggag‑‑cgGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAg                                                                                                                                        >  2:45797/4‑84 (MQ=255)
                                                                              ggag‑‑cgGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAg                                                                                                                                        <  1:45797/81‑1 (MQ=255)
                                                                               tCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTgc                                                                     <  1:790560/150‑1 (MQ=255)
                                                                                  ccctgccATGCCCGCTCCCACAGGGCCCACCACAACCATAAAGGCTGTGAGCTCCCTTTGGGAGCGGGCGTGCCCATCAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTgca                                                                    <  1:919255/144‑1 (MQ=255)
                                                                                        cacgcccgctcccacagggacctcacagccttcagggttgtggtgagccctgtgggagcgggcATGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCAccc                                                              >  1:1269097‑M2/64‑150 (MQ=255)
                                                                                            CCCGCTCCCACAGGGCTCACCACAAACCTGAAGGCTGTGAGGTCCCTGTGGGAGTGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCtt                                                          <  1:1910194‑M1/150‑1 (MQ=255)
                                                                                                 tcccacagggacctcacagccttcagggttgtggtgagccctgtgggagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCt                                                                                                 <  1:724198‑M2/52‑1 (MQ=255)
                                                                                                 tcccacagggacctcacagccttcagggttgtggtgagccctgtgggagcgggcATGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATc                                                     >  1:1686877‑M2/55‑150 (MQ=255)
                                                                                                 TCCCCCAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATc                                                     >  1:661679‑M1/1‑150 (MQ=255)
                                                                                                 TCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATc                                                     >  1:753209‑M1/1‑150 (MQ=255)
                                                                                                   ccacagggacctcacagccttcagggttgtggtgagccctgggggggcgggcATGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGc                                                   >  1:451922‑M2/53‑150 (MQ=255)
                                                                                                   CCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGc                                                   >  1:1752256‑M1/1‑150 (MQ=255)
                                                                                                   CCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGACTCGTTTGGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGc                                                   >  1:1390872‑M1/1‑150 (MQ=255)
                                                                                                    cacagggacctcacagccttcagggttgtggtgagccctgtgggagcgggcGTGCCCGCGAAAGGGcc                                                                                                                                    >  2:619062‑M2/52‑68 (MQ=255)
                                                                                                    cacagggacctcacagccttcagggttgtggtgagccctgtgggagcgggcATGCCCGCGAAAGGGc                                                                                                                                     <  1:713324‑M2/16‑1 (MQ=255)
                                                                                                    cacagggacctcacagccttcagggttgtggtgagccctgtgggagcgggcATGCCCGCGAAAGGGc                                                                                                                                     >  2:713324‑M2/52‑67 (MQ=255)
                                                                                                    CACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCtt                                                                                                >  2:1899308‑M1/1‑104 (MQ=255)
                                                                                                    CACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCtt                                                                                                <  1:1899308‑M1/104‑1 (MQ=255)
                                                                                                     cacagggacctcacagccttcagggttgtgaggtccctgtgggagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCct                                                 >  2:888203‑M2/51‑150 (MQ=255)
                                                                                                     acagggacctcacagccttcagggttgtggtgagccctgtgggagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCct                                                 >  2:6433‑M2/51‑150 (MQ=255)
                                                                                                      caggtacctcacagccttcagggttgtggtgagccctgtgggagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTg                                                                          <  2:417168‑M2/75‑1 (MQ=255)
                                                                                                      cagggacctcacagccttcagggttgtggtgagccctgtgggagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTg                                                                          >  1:417168‑M2/50‑124 (MQ=255)
                                                                                                       agggacctcacagccttcagggttgtggtgagccctgtgggagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCctgc                                               >  2:1525857‑M2/49‑150 (MQ=255)
                                                                                                        gggacctcacagccttcagggttgtggtgagccctgtgggagcgggcATGCCCGCGAAGGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCt                                                                                                 <  2:384857‑M2/52‑1 (MQ=255)
                                                                                                        gggacctcacagccttcagggttgtggtgagccctgtgggagcgggcATGCCCGCGAAGGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCt                                                                                                 >  1:384857‑M2/48‑99 (MQ=255)
                                                                                                         GGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCtt                                                          >  2:407575‑M1/1‑137 (MQ=255)
                                                                                                         GGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCtt                                                          <  1:407575‑M1/137‑1 (MQ=255)
                                                                                                             ctcacagccttcagggttgtggtgagccctgtgggagcgggcATGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATc                                         <  2:1686877‑M2/108‑1 (MQ=255)
                                                                                                             caccacAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATc                                         <  1:308266/150‑1 (MQ=255)
                                                                                                             caccacAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATc                                         <  1:265926/150‑1 (MQ=255)
                                                                                                              ctcacagccttcagggttgtgaggtccctgtgggagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCa                                                                                                                    <  1:1039875‑M2/33‑1 (MQ=255)
                                                                                                              ctcacagccttcagggttgtgaggtccctgtgggagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCa                                                                                                                    >  2:1039875‑M2/42‑74 (MQ=255)
                                                                                                               ccacAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCg                                                                                        >  1:1176388/1‑101 (MQ=255)
                                                                                                               ccacAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCg                                                                                        <  2:1176388/101‑1 (MQ=255)
                                                                                                               ccacAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCCCCGGGCGCTTGACCTGCAGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCGTGCTGAATCGc                                       >  1:398505/1‑150 (MQ=255)
                                                                                                                cacaACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGc                                                                                   >  1:471626/1‑105 (MQ=255)
                                                                                                                cacaACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGc                                                                                   <  2:471626/105‑1 (MQ=255)
                                                                                                                cacaACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGtt                                                                           <  1:1881030/113‑1 (MQ=255)
                                                                                                                cacaACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGtt                                                                           >  2:1881030/1‑113 (MQ=255)
                                                                                                                   aaCCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTg                                   >  2:1688677/1‑150 (MQ=255)
                                                                                                                    aCCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCtgtc                                  <  2:963818/150‑4 (MQ=255)
                                                                                                                    aCCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGc                                  <  2:1310910/150‑1 (MQ=255)
                                                                                                                       cTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGcc                                                                                                        <  2:1876258/77‑1 (MQ=255)
                                                                                                                       cTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGcc                                                                                                        >  1:1876258/1‑77 (MQ=255)
                                                                                                                        tGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGcgacg                              >  1:1350964/1‑150 (MQ=255)
                                                                                                                         gAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGcgacga                             <  2:579608/150‑1 (MQ=255)
                                                                                                                         agggttgtggtgagccctgtgggagcgggcATGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGcgacga                             <  2:1269097‑M2/120‑1 (MQ=255)
                                                                                                                               tgtgAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGctct                       >  1:1218407/1‑150 (MQ=255)
                                                                                                                                gtgAGGTCCCTGTGGGAGTGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCtt                      <  2:1910194/150‑1 (MQ=255)
                                                                                                                                    ggTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCa                                                                                                                    <  1:77751/52‑1 (MQ=255)
                                                                                                                                    ggTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCa                                                                                                                    >  2:77751/1‑52 (MQ=255)
                                                                                                                                     gTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCctgct                                              <  2:183356/121‑1 (MQ=255)
                                                                                                                                     gTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCctgct                                              >  1:183356/1‑121 (MQ=255)
                                                                                                                                     gTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGcc                 >  2:1312746/1‑150 (MQ=255)
                                                                                                                                        cctgtgggagcgggcGTGCCCGCGAAAGGGTCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTgg              >  1:570921‑M2/16‑150 (MQ=255)
                                                                                                                                        cctgtgggagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTgg              >  2:1902624‑M2/16‑150 (MQ=255)
                                                                                                                                         ctgtgggagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTggc             <  2:843812‑M2/136‑1 (MQ=255)
                                                                                                                                          tgtgggagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCTACGACGCTCTTCGGCCTggcg            >  2:639236‑M2/14‑150 (MQ=255)
                                                                                                                                            tgggagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTggcggc          <  1:832370‑M2/139‑1 (MQ=255)
                                                                                                                                              ggagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCTg        >  2:942166‑M2/10‑150 (MQ=255)
                                                                                                                                              ggagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCGGCGACGCGCTCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCTg        >  2:663218‑M2/10‑150 (MQ=255)
                                                                                                                                               gagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGcga                                <  2:1743070‑M2/117‑1 (MQ=255)
                                                                                                                                               gagcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGcga                                >  1:1743070‑M2/9‑125 (MQ=255)
                                                                                                                                                agcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCGCTCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCTGaa      <  1:1475078‑M2/143‑1 (MQ=255)
                                                                                                                                                agcgggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCCGCACCCGCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCTGaa      <  2:752184‑M2/143‑1 (MQ=255)
                                                                                                                                                   gggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCTGAAGTa   >  1:457601‑M2/5‑150 (MQ=255)
                                                                                                                                                    ggcGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCTGAAGTAc  <  2:1764644‑M2/147‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                  
TTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG‑‑CGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCTGAAGTAC  >  NC_002947/5903738‑5904033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.