New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	883834 =	18 (0.250)	11 (0.200)	9/184	NT	41.3%	intergenic (+69/‑259)	PP_0766/PP_0767	hypothetical protein/LuxR family transcriptional regulator
	?	NC_002947	883908 =	18 (0.330)					intergenic (+143/‑185)	PP_0766/PP_0767	hypothetical protein/LuxR family transcriptional regulator

TAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCGTTAACGGCTAGTCTCGCAAA  >  NC_002947/883763‑884051                                                                                                                                                   |                                                                                                                                                aaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttacccggcctcttcgcgggtgaacccgctcctacaggttccgcggtaggagcgggttcacccgcgaagaggccgggcaag                                                                                                                                              <  1:792393‑M2/4‑1 (MQ=255)    gCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGggcaaggcaa                                                                                                                                          >  1:1235579/1‑150 (MQ=255)    agcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgcccggcctcttcgcgggtgaacccgctcctacaggttccgcggtaggagcgggttcacccgcgaagaggccgggcaaggca                                                                                                                                           <  1:1620989‑M2/7‑1 (MQ=255)     cTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAAt                                                                                                                                         <  1:1390605/150‑1 (MQ=255)      tGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGCCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGACCGGGTTCACCACCGACGAGGCCGGGCAGCGCAATc                                                                                                                                        <  2:1879052/150‑1 (MQ=39)             aCTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAAcctcc                                                                                                                                 <  1:1616405/150‑1 (MQ=255)              cTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAAcctcct                                                                                                                                <  1:1571461/150‑1 (MQ=255)                                  gaaaCGCCCCGGCGAGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAAccccc                                                                                                            >  2:1833141/3‑150 (MQ=255)                                     aCGCCCCGGCGAGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGcc                                                                                                         >  1:181264/1‑150 (MQ=255)                                        ccccGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGccc                                                                                                        <  2:1578458/148‑1 (MQ=255)                                        ccccGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGccc                                                                                                        >  1:1578458/1‑148 (MQ=255)                                         cccGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCTCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAGTCAACCTCCTGCATACCTGTCCAAACCCCCGGCCCAg                                                                                                     >  2:435632/1‑150 (MQ=38)                                          ccGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTAAAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGc                                                                                                    >  1:69279/1‑150 (MQ=255)                                            ggCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGccc                                                                                                  <  2:1235579/150‑1 (MQ=255)                                               tCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCTCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGggcaa                                                                                                                                               <  2:1719261/102‑1 (MQ=255)                                               tCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGggcaa                                                                                                                                               >  1:1719261/1‑102 (MQ=255)                                                cGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGt                                                                                              <  1:1902854/150‑1 (MQ=255)                                                      ggCGTTTCTATTTCCTGTCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCa                                                                                        <  1:1640240/150‑1 (MQ=255)                                                                 tgccttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCGCGGAAC‑CTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCt                                                                             <  1:1620989‑M1/143‑1 (MQ=255)                                                                   ccTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTAGAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCttt                                                                           <  1:1833141/150‑1 (MQ=255)                                                                    cttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCGCGGAAC‑CTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGTAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCtttt                                                                          <  1:792393‑M1/146‑1 (MQ=255)                                                                          ccggcctcttcgcgggtgaacccgctcctaccgcggaacctgtaggagcgggttcacccgcgaagaggccgggcaag                                                                                                                                              <  1:1519620‑M2/4‑1 (MQ=255)                                                                          ccggcctcttcgcgggtgaacccgctcctaccgcggaacctgtaggagcgggttcacccgcgaagaggccgggcaag                                                                                                                                              >  2:1519620‑M2/74‑77 (MQ=255)                                                                          CGGCCTCTTCGCGGGTGAGCCCGCTCATACAG‑GTTCGGCGATGGGAGCGGGTTCACCCGCGAAGAGGCCAGGCACGGCAATCAACGTCCTGAATACCTCTCCAAAGCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCATTTTGCCGc                                                                    <  2:777425‑M1/150‑1 (MQ=255)                                                                            cCCTCTTCGCGGGTGACCCCGCTCCTACAG‑GTCCCGCGGCAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACATCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAg                                                                  >  1:1248831‑M1/2‑150 (MQ=255)                                                                              CTCTTCGCGGGTGAACCCGCTCCTACCG‑CGGAACCTGTAGGAGCGGGTTAAAACGCGGAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACACCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTc                                                                <  1:536867‑M1/150‑1 (MQ=255)                                                                              CTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTCTCAATCAGCCATGTTGCTTTTTGTCGCAGTc                                                                <  2:253260‑M1/150‑1 (MQ=255)                                                                               TCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCt                                                               <  1:1930993‑M1/150‑1 (MQ=255)                                                                                  cCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCtttt                                                            >  1:1086661‑M1/2‑150 (MQ=255)                                                                                          GAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACTTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCt                                                    <  1:1739319‑M1/150‑1 (MQ=255)                                                                                              cccgctcctaccgcggaacctgtaggagcgggttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGc                                                                                                    >  1:1563488‑M2/54‑99 (MQ=255)                                                                                              cccgctcctaccgcggaacctgtaggagcgggttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGc                                                                                                    <  2:1563488‑M2/46‑1 (MQ=255)                                                                                              cccgctcctaccgcggaacctgtaggagcgggttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTAtt                                                 >  2:115042‑M2/54‑150 (MQ=255)                                                                                               ccgctcctaccgcggaacctgtaggagcgggttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGccc                                                                                                  <  1:1317040‑M2/48‑1 (MQ=255)                                                                                               ccgctcctaccgcggaacctgtaggagcgggttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGccc                                                                                                  >  2:1317040‑M2/53‑100 (MQ=255)                                                                                               ccgctcctaccgcggaacctgtaggagcgggttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGc                                                                                      <  1:290144‑M2/60‑1 (MQ=255)                                                                                               ccgctcctaccgcggaacctgtaggagcgggttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGc                                                                                      >  2:290144‑M2/53‑112 (MQ=255)                                                                                               ccgctcctaccgcggaacctgtaggagcgggttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTg                                                >  1:1609178‑M2/53‑150 (MQ=255)                                                                                               ccgctcctaccgcggaacctgtaggagcgggttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTg                                                >  1:1512419‑M2/53‑150 (MQ=255)                                                                                               CGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTgc                                               <  2:552627‑M1/150‑1 (MQ=255)                                                                                                    CTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTc                                                                <  1:1032967‑M1/128‑1 (MQ=255)                                                                                                    CTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTc                                                                >  2:1032967‑M1/1‑128 (MQ=255)                                                                                                     TACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCcat                                         <  2:1273919‑M1/150‑1 (MQ=255)                                                                                                      ACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAg                                                                                                     >  1:1532090‑M1/1‑89 (MQ=255)                                                                                                      ACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAg                                                                                                     <  2:1532090‑M1/89‑1 (MQ=255)                                                                                                       accgcggaacctgtaggagcgggttcacccgcgaagagctgggtCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCcatc                                        <  1:991211‑M2/106‑1 (MQ=255)                                                                                                         g‑gTTCCGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCatcatc                                     <  2:181264/150‑1 (MQ=255)                                                                                                           gTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTAtt                                                 >  1:464021/1‑137 (MQ=255)                                                                                                           gTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTAtt                                                 <  2:464021/137‑1 (MQ=255)                                                                                                                gcgGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGtt                                                                                >  1:951377/1‑101 (MQ=255)                                                                                                                gcgGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGtt                                                                                <  2:951377/101‑1 (MQ=255)                                                                                                                gcgGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCAGGTTGCTTTTTGTCGGTGGCCGTTCCGCGCCTATTGCCCCCATCATCTTCaaa                               >  2:460333/1‑150 (MQ=255)                                                                                                                 cgGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAAt                              >  2:1822133/1‑150 (MQ=255)                                                                                                                   gTAGGAGCGTCTTCAGCCGCGAAGAGGCCGGCCAAAGCCGTCAAGCACCCGAAGACCGCTCCAAACCCCCGCCAACTTTGCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCCCCCATCATCTTCAAATgc                            <  1:435632/150‑1 (MQ=255)                                                                                                                     tatagcggggtcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATgcgc                          <  2:243231‑M2/120‑1 (MQ=255)                                                                                                                       gagcgggttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGccc                                                                                                        <  1:547179‑M2/42‑1 (MQ=255)                                                                                                                       gagcgggttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGccc                                                                                                        >  2:547179‑M2/29‑70 (MQ=255)                                                                                                                         gcgggttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCg                      >  1:965346‑M2/27‑150 (MQ=255)                                                                                                                         gcgggttcacccgcgaagaggccggaCAAGGCAAGCAACCTCCTGAATACCCATCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGcgcaaga                      >  1:243231‑M2/27‑147 (MQ=255)                                                                                                                             gttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCa                                                                                    <  2:1032349‑M2/62‑1 (MQ=255)                                                                                                                             gttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCa                                                                                    >  1:1032349‑M2/23‑84 (MQ=255)                                                                                                                             gttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCGTTaa                  <  1:552627‑M2/128‑1 (MQ=255)                                                                                                                              ttcacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCGTTAAc                 >  1:1258866‑M2/22‑150 (MQ=255)                                                                                                                                cacccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCGTTAACgg               <  2:1620989‑M2/131‑1 (MQ=255)                                                                                                                                 ccccgcgaagaggccgggCAAGGCAATCCACCTCCTGAATACCTCTCCAACCCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCGTTAACGGc              <  2:1247465‑M2/132‑1 (MQ=255)                                                                                                                                 acccgcgaagaggccgggCAGGGCAATCAACCTCCTGAATAGCTCTCCAAAGCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTCTCGCAGTCTTTTCTGCGCCTATTGCGCCCCTCATCTTCAAATGCGCAgctttatctgc              >  2:677760‑M2/19‑145 (MQ=255)                                                                                                                                 acccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCGTTAACGGc              <  2:1930993‑M2/132‑1 (MQ=255)                                                                                                                                   ccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCa                                                                   <  1:1598483‑M2/79‑1 (MQ=255)                                                                                                                                   ccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCa                                                                   >  2:1598483‑M2/17‑95 (MQ=255)                                                                                                                                   ccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCGTTAACGTCTa            <  2:965346‑M2/134‑1 (MQ=255)                                                                                                                                   ccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCGTTAACGGCTa            >  2:1003964‑M2/17‑150 (MQ=255)                                                                                                                                   ccgcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAACACCCGTCCTTAACGGCTa            >  2:839573‑M2/17‑150 (MQ=255)                                                                                                                                     gcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCg                                                                     <  2:1049094‑M2/77‑1 (MQ=255)                                                                                                                                     gcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCg                                                                     >  1:1049094‑M2/15‑91 (MQ=255)                                                                                                                                     gcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCGTTAACGGCTAGt          >  1:351175‑M2/15‑150 (MQ=255)                                                                                                                                     gcgaagaggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCACTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCGTTAACGGCTAGt          >  1:1495171‑M2/15‑150 (MQ=255)                                                                                                                                           aggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCatcatc                                     >  2:488961‑M2/9‑117 (MQ=255)                                                                                                                                           aggccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCatcatc                                     <  1:488961‑M2/109‑1 (MQ=255)                                                                                                                                             gccgggCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCGTTAACGGCTAGTCTCGCaaa  >  1:160216‑M2/7‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                TAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCGCAGCGTTAACGGCTAGTCTCGCAAA  >  NC_002947/883763‑884051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.