| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 883834 = | 18 (0.250) | 11 (0.200) | 9/184 | NT | 41.3% | intergenic (+69/‑259) | PP_0766/PP_0767 | hypothetical protein/LuxR family transcriptional regulator |
| ? | NC_002947 | 883908 = | 18 (0.330) | intergenic (+143/‑185) | PP_0766/PP_0767 | hypothetical protein/LuxR family transcriptional regulator | |||||
Only 100 of 103 total aligned reads displayed.
CTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTT > NC_002947/883693‑883979 | tttgcgagactagccgttaacgctgcgcatttgaagatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGc > 1:160216‑M1/145‑150 (MQ=255)cTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTC > 2:1571461‑M1/1‑150 (MQ=255) ttCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGG < 1:224875‑M1/150‑1 (MQ=255) ttCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGG > 2:1616405‑M1/1‑150 (MQ=255) actagccgttaacgctgcgcatttgaagatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacagtggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTcgc > 1:1495171‑M1/137‑150 (MQ=255) actagccgttaacgctgcgcatttgaagatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTcgc > 1:351175‑M1/137‑150 (MQ=255) tagccgttaaggacgggtgtttgaagatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCgg > 2:839573‑M1/135‑150 (MQ=255) tagccgttaacgctgcgcatttgaagatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCgg > 2:1003964‑M1/135‑150 (MQ=255) tagacgttaacgctgcgcatttgaagatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCgg < 2:965346‑M1/16‑1 (MQ=255) gccgttaacgctgcgcatttgaagatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGt < 2:1930993‑M1/18‑1 (MQ=255) gccgttaacgctgcgcatttgaagatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcggggggttggagaggtattcaggaggtggattgccttgCCCGGCCTCTTCGcgggg < 2:1247465‑M1/18‑2 (MQ=255) gcagataaagctgcgcatttgaagatgaggggcgcaataggcgcagaaaagactgcgagaaaaagcaacatggctgatggacaggggctggggcggggctttggagagctattcaggaggttgattgccctgCCCGGCCTCTTCGCGGGt > 2:677760‑M1/133‑150 (MQ=255) ttCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGTGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAAC > 2:1577802‑M1/1‑150 (MQ=255) ttCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAAC > 1:1396816‑M1/1‑150 (MQ=255) ttCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAAC > 2:43153‑M1/1‑150 (MQ=255) ccgttaacgctgcgcatttgaagatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTg < 2:1620989‑M1/19‑1 (MQ=255) gttaacgctgcgcatttgaagatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGaa > 1:1258866‑M1/130‑150 (MQ=255) ttaacgctgcgcatttgaagatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAAc < 1:552627‑M1/22‑1 (MQ=255) gTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCTTCAGTCGGTTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGC < 1:1884352‑M1/150‑1 (MQ=255) gTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGC < 1:43153‑M1/150‑1 (MQ=255) gTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGC < 2:1396816‑M1/150‑1 (MQ=255) tGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCC < 1:440995‑M1/147‑1 (MQ=255) tGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCC > 2:440995‑M1/1‑147 (MQ=255) tcttgcgcatttgaagatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggatgggtattcaggaggttgcttgccttgTCCGGCCTCTTCGCGGGTGAACCCGc > 1:243231‑M1/125‑150 (MQ=255) cgctgcgcatttgaagatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGc > 1:965346‑M1/125‑150 (MQ=255) aGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTAGTCGCTAAGCTGAAATCACTGAACGCCGGG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTA > 2:1086661‑M1/1‑150 (MQ=255) gCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTAC > 2:1902854‑M1/1‑150 (MQ=255) gcgcatttgaagatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGACCCcgctata < 2:243231‑M1/30‑4 (MQ=255) cAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGATAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACa < 1:118485/150‑1 (MQ=255) ggCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGTTGAACTCCAGTACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACa < 2:289532/150‑1 (MQ=255) ggCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcg > 2:1758711‑M1/1‑146 (MQ=255) tCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgt < 1:713770‑M1/150‑13 (MQ=255) gatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCct > 2:488961‑M1/110‑117 (MQ=255) gatgatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCct < 1:488961‑M1/8‑1 (MQ=255) ccAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGgta > 2:1467463‑M2/1‑147 (MQ=255) cAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtag < 1:1758711‑M1/150‑15 (MQ=255) cAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtag > 1:418457‑M1/1‑136 (MQ=255) cAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCAGAGGCGTTTCTTTTTCCTGACCCTGCCTCCTCGCGGGCGAACCCGGTCCTACAG‑GTTCCGCGgtag < 2:1390605‑M2/150‑5 (MQ=255) gatgggcgcaataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgACCCAGCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGt < 1:991211‑M1/44‑1 (MQ=255) aGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgc > 2:11822‑M1/1‑135 (MQ=255) aGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgc < 1:11822‑M1/138‑4 (MQ=255) ccGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGTGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGgtaggagc > 1:1577802‑M2/1‑142 (MQ=255) cGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTGCCTTGCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcg < 2:1600554‑M1/150‑20 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgg < 1:1035245‑M1/150‑21 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGgtaggagcgg > 2:1786037‑M2/1‑140 (MQ=255) cAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGGCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcggg < 2:272828‑M1/150‑22 (MQ=255) cAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcggg < 2:822338‑M1/150‑22 (MQ=255) cAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcggg < 1:1336079‑M1/150‑22 (MQ=255) aagcgtagcgtccgtTGGATATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcggg < 2:418457‑M1/143‑22 (MQ=255) aGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGCCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGgtaggagcgggt > 2:330977‑M2/1‑138 (MQ=255) caataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCgg > 1:1512419‑M1/99‑150 (MQ=255) caataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCgg > 1:1609178‑M1/99‑150 (MQ=255) aataggcgcggaaaagactgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCggg > 2:115042‑M1/98‑150 (MQ=255) ttCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGgta < 1:1262730‑M2/121‑4 (MQ=255) ttCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGgta > 2:1262730‑M2/1‑118 (MQ=255) tgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCgg > 2:1598483‑M1/80‑95 (MQ=255) tgcgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCgg < 1:1598483‑M1/16‑1 (MQ=255) cgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTcgc < 2:1049094‑M1/14‑1 (MQ=255) cgacaaaaagcaacatggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTcgc > 1:1049094‑M1/78‑91 (MQ=255) gCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGggcaaggcaa > 1:1235579/1‑150 (MQ=255) cTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAAt < 1:1390605/150‑1 (MQ=255) tGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGCCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGACCGGGTTCACCACCGACGAGGCCGGGCAGCGCAATc < 2:1879052/150‑1 (MQ=39) aTCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgggt < 1:502124‑M1/116‑23 (MQ=255) aTCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgggt > 2:502124‑M1/1‑94 (MQ=255) tggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAAc > 1:1032349‑M1/63‑84 (MQ=255) tggctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAAc < 2:1032349‑M1/22‑1 (MQ=255) aCTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAAcctcc < 1:1616405/150‑1 (MQ=255) cTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAAcctcct < 1:1571461/150‑1 (MQ=255) gctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCgg > 2:290144‑M1/61‑112 (MQ=255) gctgatggacaggggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCgg < 1:290144‑M1/52‑1 (MQ=255) aaCGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGgtaggagcgg > 2:388875‑M2/1‑97 (MQ=255) aaCGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGgtaggagcgg < 1:388875‑M2/107‑11 (MQ=255) gggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCgg < 1:1317040‑M1/52‑1 (MQ=255) gggctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCgg > 2:1317040‑M1/49‑100 (MQ=255) gctggggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCggg > 1:1563488‑M1/47‑99 (MQ=255) tCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgg < 2:11299‑M1/95‑21 (MQ=255) tCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgg > 1:11299‑M1/1‑75 (MQ=255) gggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGCTc > 2:547179‑M1/43‑70 (MQ=255) gggcgggggtttggagaggtattcaggaggttgattgccttgCCCGGCCTCTTCGCGGGTGAACCCGCTc < 1:547179‑M1/28‑1 (MQ=255) cccAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgg > 1:736237‑M1/1‑73 (MQ=255) cccAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgg < 2:736237‑M1/93‑21 (MQ=255) gaaaCGCCCCGGCGAGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAAccccc > 2:1833141/3‑150 (MQ=255) aCGCCCCGGCGAGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGcc > 1:181264/1‑150 (MQ=255) ccccGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGccc > 1:1578458/1‑148 (MQ=255) ccccGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGccc < 2:1578458/148‑1 (MQ=255) cccGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCTCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAGTCAACCTCCTGCATACCTGTCCAAACCCCCGGCCCAg > 2:435632/1‑150 (MQ=38) ccGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTAAAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGc > 1:69279/1‑150 (MQ=255) ggCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGccc < 2:1235579/150‑1 (MQ=255) gcgagccggGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGgtaggagtgggttcacccgcgaagaggcc > 1:971786‑M2/5‑69 (MQ=255) tCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCTCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGggcaa < 2:1719261/102‑1 (MQ=255) tCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGggcaa > 1:1719261/1‑102 (MQ=255) cGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGt < 1:1902854/150‑1 (MQ=255) ggCGTTTCTATTTCCTGTCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCa < 1:1640240/150‑1 (MQ=255) gTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagc < 1:885786‑M1/65‑19 (MQ=255) gTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagc > 2:885786‑M1/1‑47 (MQ=255) tgccttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCGCGGAAC‑CTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCt < 1:1620989‑M1/143‑1 (MQ=255) ccTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTAGAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCttt < 1:1833141/150‑1 (MQ=255) cttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCGCGGAAC‑CTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGTAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCtttt < 1:792393‑M1/146‑1 (MQ=255) cttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCgg < 1:1519620‑M1/73‑1 (MQ=255) cttgCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCgg > 2:1519620‑M1/5‑77 (MQ=255) | CTACGACTTCGGCTTCAGTGCCAGCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTG‑‑‑TGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAG‑GTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTT > NC_002947/883693‑883979 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |