| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3163781 = | 64 (0.880) | 9 (0.130) | 8/238 | NT | 12.6% | coding (528/1278 nt) | PP_2778 | 3‑oxoacyl‑ACP synthase |
| ? | NC_002947 | 3163807 = | 63 (0.900) | coding (554/1278 nt) | PP_2778 | 3‑oxoacyl‑ACP synthase | |||||
TCCACGCGCTGGCAGAGTGCGCCCAGCCCATCAAAGCTGTAGTAGGACAATTCATGGGCCATCAACTCCACCGCGCCACACAACGCCAGGTCGATCTCGCCACGGGCGATCGCTCGATAGGCGCTGCCGATGG‑‑CCATGGTGCCGGCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3163930‑3163781‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaGCGCCTATCGAGCGATCGCCCGTGGCGAGATCGACCTGGCGTTGTGTGGCGCGGTGGAGTTGATGGCCCATGAATTGTCCTACTACAGCTTTGATGGGCTGGGCGCACTCTGCCAGCGCGTGGACTTTTCCC > NC_002947/3163807‑3163938 TCCACGCGCTGGCAGAGTGCGCCCAGCCCATCAAAGCTGTAGTAGGACAATTCATGGGCCATCAACTCCACCGCGCCACACAACGCCAGGTCGATCTCGCCACGGGCGATCGCTCGATAGGCGCTGCCGATGG‑‑CCATGGTGCCGGCGGCA > 1:472496/1‑150 AGAGTGCGCCCAGCCCATCAAAGCTGTAGTAGGACAATTCATGGGCCATCAACTCCACCGCGCCACACAACGCCAGGTCGATCTCGCCACGGGCGATCGCTCGATAGGCGCTGCCGCCGGCACCATG‑‑GCCATCGGCAGCGCCTATCGAGC > 1:532974/1‑150 AGTGCGCCCAGCCCATCAAAGCTGTAGTAGGACAATTCATGGGCCATCAACTCCACCGCGCCACACAACGCCAGGTCGATCTCGCCACGGGCGATCGCTCGATAGGCGCTGCCGCCGGCACCATG‑‑GCCATCGGCAGCGCCTATCGAGCGA < 2:532974/150‑1 ATGGGCCATCAACTCCACCGCGCCACACAACGCCAGGTCGATCTCGCCACGGGCGATCGCTCGATAGGCGCTGCCGATGG‑‑CCATGGTGCCGGCGG < 1:813869/95‑1 ATGGGCCATCAACTCCACCGCGCCACACAACGCCAGGTCGATCTCGCCACGGGCGATCGCTCGATAGGCGCTGCCGATGG‑‑CCATGGTGCCGGCGG > 2:813869/1‑95 CTGCCGATGG‑‑CCATGGTGCCGGCGGCAGCGCCTATCGAGCGATCGCCCGTGGCGAGATCGACCTGGCGTTGTGTGGCGCGGTGGAGTTGATGGCCCATGAATTGTC < 1:716236/106‑1 CTGCCGATGG‑‑CCATGGTGCCGGCGGCAGCGCCTATCGAGCGATCGCCCGTGGCGAGATCGACCTGGCGTTGTGTGGCGCGGTGGAGTTGATGGCCCATGAATTGTC > 2:716236/1‑106 TGCCGATGG‑‑CCATGGTGCCGGCGGCAGCGCCTATCGAGCGATCGCCCGTGGCGAGATCGACCTGGCGTTGTGTGGCGCGGTGGAGTTGATGGCCCATGAATTGTCCCACTACAGCTTTGATGGGCTGGGCGCACTCT < 1:1120683/137‑1 TGCCGATGG‑‑CCATGGTGCCGGCGGCAGCGCCTATCGAGCGATCGCCCGTGGCGAGATCGACCTGGCGTTGTGTGGCGCGGTGGAGTTGATGGCCCATGAATTGTCCCACTACAGCTTTGATGGGCTGGGCGCACTCT > 2:1120683/1‑137 CGATGG‑‑CCATGGTGCCGGCGGCAGCGCCTATCGAGCGATCGCCCGTGGCGAGATCGACCTGGCGTTGTGTGGCGCGGTGGAGTTGATGGCCCATGAATTGTCCTACT > 1:890017/1‑107 CGATGG‑‑CCATGGTGCCGGCGGCAGCGCCTATCGAGCGATCGCCCGTGGCGAGATCGACCTGGCGTTGTGTGGCGCGGTGGAGTTGATGGCCCATGAATTGTCCTACT < 2:890017/107‑1 G‑‑CCATGGTGCCGGCGGCAGCGCCTATCGAGCGATCGCCCGTGGCGAGATCGACCTGGCGTTGTGTGGCGCGGTGGAGTTGATGGCCCATGAATTGTCCTACTACAGCTTTGATGGGCTGGGCGCACTCTGCCAGCGCGTGGACTTTTCCC > 1:1412854/1‑150 TCCACGCGCTGGCAGAGTGCGCCCAGCCCATCAAAGCTGTAGTAGGACAATTCATGGGCCATCAACTCCACCGCGCCACACAACGCCAGGTCGATCTCGCCACGGGCGATCGCTCGATAGGCGCTGCCGATGG‑‑CCATGGTGCCGGCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3163930‑3163781‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaGCGCCTATCGAGCGATCGCCCGTGGCGAGATCGACCTGGCGTTGTGTGGCGCGGTGGAGTTGATGGCCCATGAATTGTCCTACTACAGCTTTGATGGGCTGGGCGCACTCTGCCAGCGCGTGGACTTTTCCC > NC_002947/3163807‑3163938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |