New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	258497 =	51 (1.040)	5 (0.110)	5/232	NT	10.2%	coding (31/1407 nt)	PP_0207	nitrate ABC transporter substrate‑binding protein
	?	NC_002947	258529 =	41 (0.900)					coding (63/1407 nt)	PP_0207	nitrate ABC transporter substrate‑binding protein

GTACTTGCCGTCGTGCGGCAGGTACTTGTCCAGCAGGCCCAGCTCACGGATCAGCAGGCCACCGGTGGCGCAGTTGATGGTGGTGTCCTGGGTGCCGATGGCGATGCGTATGGTTTCGGCGCTGGCGTTCAGGCCAGTGAGCGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/258646‑258497 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagcgcCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGACGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGA  >  NC_002947/258529‑258674                                                                                                                                                                                                                                                                                                          GTACTTGCCGTCGTGCGGCAGGTACTTGTCCAGCAGGCCCAGCTCACGGATCAGCAGGCCACCGGTGGCGCAGTTGATGGTGGTGTCCTGGGTGCCGATGGCGATGCGTATGGTTTCGGCGCTGGCGTTCAGGCCAGTGAGCGCCAGCGC                                                                                                                                                    >  1:1273380/1‑150                                                                                                                 GTTTCGGCGCTGGCGTTCAGGCCAGTGAGCGCCAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACC                                                                                                            >  1:950538/1‑78                                                                                                                 GTTTCGGCGCTGGCGTTCAGGCCAGTGAGCGCCAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACC                                                                                                            <  2:950538/78‑1                                                                                                                      GGCGCTGGCGTTCAGGCCAGTGAGCGCCAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGACGGCAAGTA                               >  1:402647/1‑150                                                                                                                          CTGGCGTTCAGGCCAGTGAGCGCCAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCC                                                                             <  1:975284/100‑1                                                                                                                          CTGGCGTTCAGGCCAGTGAGCGCCAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCC                                                                             >  2:975284/1‑100                                                                                                                                              CGCCAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGACGGCAAGTACAAGGACGCCACCTACCAGGTCGA       >  1:745936/1‑150                                                                                                                                                  AGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGACGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGG   >  2:1141330/1‑150                                                                                                                                                  AGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGACGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGG   <  2:302648/150‑1                                                                                                                                                   GCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGACGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGA  <  1:881884/150‑1                                                                                                                                                   GCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGACGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGA  >  2:881884/1‑150                                                                                                                                                                                                                                                                                                          GTACTTGCCGTCGTGCGGCAGGTACTTGTCCAGCAGGCCCAGCTCACGGATCAGCAGGCCACCGGTGGCGCAGTTGATGGTGGTGTCCTGGGTGCCGATGGCGATGCGTATGGTTTCGGCGCTGGCGTTCAGGCCAGTGAGCGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/258646‑258497 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagcgcCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGACGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGA  >  NC_002947/258529‑258674

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.