| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 280199 | 31 (0.630) | 7 (0.160) | 7/228 | NT | 18.4% | coding (51/669 nt) | sctS | sulfur compound ABC transporter permease |
| ? | NC_002947 | = 280204 | 34 (0.760) | coding (46/669 nt) | sctS | sulfur compound ABC transporter permease | |||||
CAGCAGCGGCGTGCCGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/280043‑280199‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgcccttcCTGC‑TGAAGGGCGCGGGTTATACGGTGCTGCTCAGTGTCGGCGGCATGTTCTTCGGTCTGGTGCTGGGCTTTGCCCTGGCGCTGATGCGGCTGTCGAAGATTCTGCCGCTGAACTGGCTGGCGCGGGTCTACGTGTCGTTCTTCCG < NC_002947/280204‑280059 CAGCAGCGGCGTGCCGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGC < 1:397608/150‑1 AGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGC‑TGAAGGGCG < 2:199686/150‑1 GCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGC‑TGAAGGGC < 1:960582/116‑1 GCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGC‑TGAAGGGC > 2:960582/1‑116 ACTGAGCAGCACCGTATAACCCGCGCCCTT‑CAGCAGGAAGGGCGCGGGTTATACGGTGCTGCTCAGTGTCGGCGGCATGTTCTTCGGTCT > 1:549910/1‑90 ACTGAGCAGCACCGTATAACCCGCGCCCTT‑CAGCAGGAAGGGCGCGGGTTATACGGTGCTGCTCAGTGTCGGCGGCATGTTCTTCGGTCT < 2:549910/90‑1 CGTATAACCCGCGCCCTT‑CAGCAGGAAGGGCGCGGGTTATACGGTGCTGCTCAGTGTCGGCGGCATGTTCTTCGGTCTGGTGCTGGGCTT > 1:384431/1‑90 CGTATAACCCGCGCCCTT‑CAGCAGGAAGGGCGCGGGTTATACGGTGCTGCTCAGTGTCGGCGGCATGTTCTTCGGTCTGGTGCTGGGCTT < 2:384431/90‑1 CCGCGCCTTTCTTGC‑TGAAGGGCGCGGGTTATACGGTGCTGCCCAGTGTCGGCGGCATGTTCTTCGGTCTGGTGCTGGGCTTTGCCCTGGCGCTGATGCGGCTGTCGAAGATTCTGCCGCTGAACTGGCTGGCGCGGGTCTACGTGTCGT < 2:74924/150‑1 CGCGCCCTTCCTGC‑TGAAGGGCGCGGGTTATACGGTGCTGCTCAGTGTCGGCGGCATGTTCTTCGGTCTGGTGCTGGGCTTTGCCCTGGCGCTGATGCGGCTGTCGAAGATTCTGCCGCTGAACTGGCTGGCGCGGGTCTACGTGTCGTT < 1:422022/150‑1 CGCGCCCTTCCTGC‑TGAAGGGCGCGGGTTATACGGTGCTGCTCAGTGTCGGCGGCATGTTCTTCGGTCTGGTGCTGGGCTTTGCCCTGGCGCTGATGCGGCTGTCGAAGATTCTGCCGCTGAACTGGCTGGCGCGGGTCTACGTGTCGTT > 2:130442/1‑150 GCGCCCTTCCTGC‑TGAAGGGCGCGGGTTATACGGTGCTGCTCAGTGTCGGCGGCATGTTCTTCGGTCTGGTGCTGGGCTTTGCCCTGGCGCTGATGCGGCTGTCGAAGATTCTGCCGCTGAACTGGCTGGCGCGGGTCTACGTGTCGTTC > 2:728189/1‑150 CTTCCTGC‑TGAAGGGCGCGGGTTATACGGTGCTGCTCAGTGTCGGCGGCATGTTCTTCGGTCTGGTGCTGGGCTTTGCCCTGGCGCTGATGCGGCTGTCGAAGATTCTGCCGCTGAACTGGCTGGCGCGGGTCTACGTGTCGTTCTTCCG > 2:935074/1‑150 CCTGC‑TGAAGGGCGCGGGTTATACGGTGCTGCTCAGTGTCGGCGGCATGTTCTTCGGTCTGGTGCTGGGCTTTGCCCTGGCGCTGATGCGGCTGTCGAAGATTCTGCCGCTGAACTGGCTGGCGCGG > 1:97984/1‑127 CCTGC‑TGAAGGGCGCGGGTTATACGGTGCTGCTCAGTGTCGGCGGCATGTTCTTCGGTCTGGTGCTGGGCTTTGCCCTGGCGCTGATGCGGCTGTCGAAGATTCTGCCGCTGAACTGGCTGGCGCGG < 2:97984/127‑1 CAGCAGCGGCGTGCCGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/280043‑280199‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgcccttcCTGC‑TGAAGGGCGCGGGTTATACGGTGCTGCTCAGTGTCGGCGGCATGTTCTTCGGTCTGGTGCTGGGCTTTGCCCTGGCGCTGATGCGGCTGTCGAAGATTCTGCCGCTGAACTGGCTGGCGCGGGTCTACGTGTCGTTCTTCCG < NC_002947/280204‑280059 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |