| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 360248 = | 52 (1.060) | 4 (0.090) | 4/238 | NT | 7.2% | intergenic (‑27/‑105) | PP_0299/PP_0300 | hypothetical protein/metallopeptidase |
| ? | NC_002947 | 360274 = | 53 (1.140) | intergenic (‑53/‑79) | PP_0299/PP_0300 | hypothetical protein/metallopeptidase | |||||
ACAGCACCTAGCAAGCAGAATTTCAATTGTTCCCGGTTCATGTTCATGCTCCAGATATCGGAGCCTTACTGGACCATGCGCATCGATTCCCAACAACTGACATAAATAACAGTTGCAAAAAAATAACCCCGGGAAGC‑CGTGAGC‑TA‑CCGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/360399‑360248‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggggTTATTTTTTTGCAACTGTTATTTATGTCAGTTGTTGGGAATCGATGCGCATGGTCCAGTAAGGCTCCGATATCTGGAGCATGAACATGAACCGGGAACAATTGAAATTCTGCTTGCTAGGTGCTGTGTTTCTTTTTGGAGGATG > NC_002947/360274‑360417 ACAGCACCTAGCAAGCAGAATTTCAATTGTTCCCGGTTCATGTTCATGCTCCAGATATCGGAGCCTTACTGGACCATGCGCATCGATTCCCAACAACTGACATAAATAACAGTTGCAAAAAAATAACCCCGGGAAGC‑CGTGAGC‑TA‑CCGG > 2:845234/1‑150 CCCGGTTCATGTTCATGCTCCAGATATCGGAGCCTTACTGGACCATGCGCATCGATTCCCAACAACTGACATAAATAACAGTTGCAAAAAAATAACCCCGGTAGCT‑CACG‑GCTTC‑CCGGGGTTATTTTTTTGCAACTGTTATTTATGTCA < 2:351058/150‑1 TTCATGCTCCAGATATCGGAGCCTTACTGGACCATGCGCATCGATTCCCAACAACTGACATAAATAACAGTTGCAAAAAAATAACCCC‑GGTAGCTCACG‑GCTTC‑CCGGGGTTATTTTTTTGCAACTGTTATTTATGTCAGTTGTTG > 1:165621/1‑146 TTCATGCTCCAGATATCGGAGCCTTACTGGACCATGCGCATCGATTCCCAACAACTGACATAAATAACAGTTGCAAAAAAATAACCCC‑GGTAGCTCACG‑GC‑TTCCCGGGGTTATTTTTTTGCAACTGTTATTTATGTCAGTTGTTG < 2:165621/146‑1 ACCCCGGGAAGC‑CGTGAGC‑TA‑CCGGGGTTATTTTTTTGCAACTGTTATTTATGTCAGTTGTTGGGAATCGATGCGCATGGTCCAGTAAGGCTCCGATATCTGGAGCATGAACATGAACCGGGACCAATTGAAATTCTGCTTCCTAGGTGC > 1:494759/1‑150 CCGGGGTTATTTTTTTTTTTTTTTTATTTATGTCAGTTGTTAAGAATCTATGCGCATGGTCCAGTAAGGCTCCGATATCTGGATCATGAACATGAACCGGGATCAATTGTAATTCTGCTTGCTAGGTGCTGTGTTTCTTTTTGGAGGATG > 2:832334/1‑150 CCGGGGTTATTTTTTTGCAACTGTTATTTATGTCAGTTGTTGGGAATCGATGCGCATGGTCCAGTAAGGCTCCGATATCTGGAGCATGAACATGAACCGGGAACAATTGAAATTCTGCTTGCTAGGTACTGTGTTTCTTTGTGGAGGAcg > 1:25911/1‑148 ACAGCACCTAGCAAGCAGAATTTCAATTGTTCCCGGTTCATGTTCATGCTCCAGATATCGGAGCCTTACTGGACCATGCGCATCGATTCCCAACAACTGACATAAATAACAGTTGCAAAAAAATAACCCCGGGAAGC‑CGTGAGC‑TA‑CCGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/360399‑360248‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggggTTATTTTTTTGCAACTGTTATTTATGTCAGTTGTTGGGAATCGATGCGCATGGTCCAGTAAGGCTCCGATATCTGGAGCATGAACATGAACCGGGAACAATTGAAATTCTGCTTGCTAGGTGCTGTGTTTCTTTTTGGAGGATG > NC_002947/360274‑360417 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |