New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 653522 = | 56 (1.140) | 3 (0.060) | 3/238 | NT | 5.6% | coding (1224/1962 nt) | ctpL | methyl‑accepting chemotaxis protein CtpL |
? | NC_002947 | 653570 = | 48 (1.030) | coding (1176/1962 nt) | ctpL | methyl‑accepting chemotaxis protein CtpL |
GACATCCAGGAGTCGCTCAACCGCCTGCGTCAGTACCTGGTGGAGCTGGTCGGCACCATCCGTCATAATGCCGAGCAGGTGGCCGGCAGCAGCCATGCCCTGGCCGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/653671‑653522 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAGGTACTGACGCAGGCGGTTGAGCGACTCCTGGATGTCGTGCAGTTCGCGGTTGGTCTTGCCCAGGGCGATGGCTTGGGCGAA > NC_002947/653570‑653716 GACATCCAGGAGTCGCTCAACCGCCTGCGTCAGTACCTGGTGGAGCTGGTCGGCACCATCCGTCATAATGCCGAGCAGGTGGCCGGCAGCAGCCATGCCCTGGCCGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGCCGGC > 2:1215679/1‑150 CCTGGCCGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGCCGGCCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAGGTACTGAC < 1:653039/126‑1 CCTGGCCGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGCCGGCCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAGGTACTGAC > 2:653039/1‑126 GCCGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGCCGGCCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAGGTACTGACGCAGGCGGTTGAGCGACTCCTGGATGTC > 1:5748/1‑150 GGCCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAGGTACTGACGCAGGCGGTTGAGCGACTCCTGGATGTCGTGCAGTTCGCGGTTGGTCTTGCCCAGGGCGATGGCTTGGGCGAA > 1:342364/1‑150 GACATCCAGGAGTCGCTCAACCGCCTGCGTCAGTACCTGGTGGAGCTGGTCGGCACCATCCGTCATAATGCCGAGCAGGTGGCCGGCAGCAGCCATGCCCTGGCCGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/653671‑653522 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAGGTACTGACGCAGGCGGTTGAGCGACTCCTGGATGTCGTGCAGTTCGCGGTTGGTCTTGCCCAGGGCGATGGCTTGGGCGAA > NC_002947/653570‑653716 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |