New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 724736 | 50 (1.020) | 4 (0.090) | 3/238 | NT | 7.3% | coding (1166/1203 nt) | PP_0619 | branched‑chain amino acid ABC transporter substrate‑binding protein |
? | NC_002947 | = 724774 | 54 (1.160) | coding (1128/1203 nt) | PP_0619 | branched‑chain amino acid ABC transporter substrate‑binding protein |
GCCCAGGCCGTTGAGCAGTTGGAACAGGTACAAATCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/724592‑724736 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacgaGGACGACCTGGCCGAAGTCATCAGTTCGGGCCGCTCGTTCGTCGAGGT < NC_002947/724774‑724727 GCCCAGGCCGTTGAGCAGTTGGAACAGGTACAAATCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAGGACG > 2:459083/1‑150 GCCCAGGCCGTTGAGCAGTTGGAACAGGTACAAATCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAGGACG > 2:536254/1‑150 GTACAAATCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAGGACGACCTGGCCGAAGTCATCAGTTCGGGCC > 1:551941/1‑150 GAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAGGACGACCTGGCCGAAGTCATCAGTTCGGGCCGCTCGTTCGTCGAGG < 2:551941/150‑1 AGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAGGACGACCTGGCCGAAGTCATCAGTTCGGGCCGCTCGTTCGTCGAGGT < 1:459083/150‑1 AGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAGGACGACCTGGCCGAAGTCATCAGTTCGGGCCGCTCGTTCGTCGAGGT < 1:536254/150‑1 GCCCAGGCCGTTGAGCAGTTGGAACAGGTACAAATCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/724592‑724736 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacgaGGACGACCTGGCCGAAGTCATCAGTTCGGGCCGCTCGTTCGTCGAGGT < NC_002947/724774‑724727 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |