New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 724736	50 (1.020)	4 (0.090)	3/238	NT	7.3%	coding (1166/1203 nt)	PP_0619	branched‑chain amino acid ABC transporter substrate‑binding protein
	?	NC_002947	= 724774	54 (1.160)					coding (1128/1203 nt)	PP_0619	branched‑chain amino acid ABC transporter substrate‑binding protein

AGGCCCAGGCCGTTGAGCAGTTGGAACAGGTACAAATCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCAGTTCTTCGCCGGTCGGGCCCTGGAAG  >  NC_002947/724590‑724879                                                                                                                                                   |                                                                                                                                                aggcccaggccGTTGAGCAGTTGGAACAGGTACAAATCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGacgaacg                                                                                                                                              >  1:879871/1‑150 (MQ=255)   gcccaggccGTTGAGCAGTTGGAACAGGTACAAATCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAggacg                                                                                                                                            >  2:536254‑M1/1‑145 (MQ=255)   gcccaggccGTTGAGCAGTTGGAACAGGTACAAATCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAggacg                                                                                                                                            >  2:459083‑M1/1‑145 (MQ=255)            gTTGAGCAGTTGGAACAGGTACAAATCGAGCATGAGCGTGCCCTCGACAGCGTGTGCAGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGaa                                                                                                                                   >  2:954302/1‑150 (MQ=255)                aGCAGTTGGAACAGGTACAAATCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACtga                                                                                                                               <  1:545269/150‑1 (MQ=255)                aGCAGTTGGAACAGGTACAAATCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACtga                                                                                                                               <  2:417852/150‑1 (MQ=255)                 gCAGTTGGAACAGGTACAAATCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCAGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACtgat                                                                                                                              >  2:710762/1‑150 (MQ=255)                        gAACAGGTACAAATCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTTAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCg                                                                                                                       >  2:1146610/1‑150 (MQ=255)                              gTACAAATCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAggacgacctggccgaagtcatcagttcgggcc                                                                                                                 >  1:551941‑M1/1‑118 (MQ=255)                               tACAAATCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTGTGTTACTACCTCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTAATCGACCTCGACGAAAGAGCGGCCCGAACTGATGACTTCCGCCAGgt                                                                                                                >  2:630008/1‑150 (MQ=255)                                    aTCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTcc                                                                                                           >  1:741726/1‑150 (MQ=255)                                             gAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAggacgacctggccgaagtcatcagttcgggccgctcgttcgtcgagg                                                                                                  <  2:551941‑M1/150‑48 (MQ=255)                                              aGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAggacgacctggccgaagtcatcagttcgggccgctcgttcgtcgaggt                                                                                                 <  1:459083‑M1/150‑49 (MQ=255)                                              aGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAggacgacctggccgaagtcatcagttcgggccgctcgttcgtcgaggt                                                                                                 <  1:536254‑M1/150‑49 (MQ=255)                                               gCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTCATGACTTCGGCCAGGTCGTCCTCGTCGCGCAt                                                                                                >  2:103125/1‑150 (MQ=255)                                                cGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATc                                                                                               <  2:936592/150‑1 (MQ=255)                                                    cccTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGcc                                                                                           >  1:1153727/1‑150 (MQ=255)                                                     ccTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGccc                                                                                          <  1:103125/150‑1 (MQ=255)                                                     ccTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACCAAGGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGccc                                                                                          >  1:1031596/1‑150 (MQ=255)                                                      cTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGcccc                                                                                         >  1:1114921/1‑150 (MQ=255)                                                        cGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTg                                                                                       <  1:995244/150‑1 (MQ=255)                                                         gACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTgg                                                                                      >  2:31969/1‑150 (MQ=255)                                                               gcgcCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGATTg                                                                                >  2:476796/1‑150 (MQ=255)                                                                 gcCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGcc                                                                              >  2:55519/1‑150 (MQ=255)                                                                          cTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGcagcag                                                                     <  1:710762/150‑1 (MQ=255)                                                                           tGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAgg                                                                    <  2:1153727/150‑1 (MQ=255)                                                                                       tgtTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTg                                                        >  1:1165790/1‑150 (MQ=255)                                                                                        gtTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGa                                                       <  2:1165790/150‑1 (MQ=255)                                                                                        gtTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGa                                                       <  2:70065/150‑1 (MQ=255)                                                                                            gtgACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCAc                                                   <  1:55519/150‑1 (MQ=255)                                                                                            gtgACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCAc                                                   >  1:1171055/1‑150 (MQ=255)                                                                                               aCTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAg                                                      <  2:526280/144‑1 (MQ=255)                                                                                               aCTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAg                                                      >  1:526280/1‑144 (MQ=255)                                                                                                  aaCGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCtggtg                                             <  2:741726/150‑1 (MQ=255)                                                                                                     gccgcAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCtggtg                                             <  2:614965/147‑1 (MQ=255)                                                                                                     gccgcAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCtggtg                                             >  1:614965/1‑147 (MQ=255)                                                                                                       cgcAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCAc                                        >  1:973345/1‑150 (MQ=255)                                                                                                           gCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCgg                                    <  1:804137/150‑1 (MQ=255)                                                                                                             tttaGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGc                                  <  1:1146610/147‑1 (MQ=255)                                                                                                              tCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGcagcag                                                                     >  1:659948/1‑114 (MQ=255)                                                                                                              tCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGcagcag                                                                     <  2:659948/114‑1 (MQ=255)                                                                                                              tCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCGCCCGGGct                                 <  2:1114921/150‑2 (MQ=255)                                                                                                                aGGCGAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGa                               <  1:1176612/150‑1 (MQ=255)                                                                                                                 ggCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCGGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGAt                              <  1:31969/150‑1 (MQ=255)                                                                                                                  gCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCtggtg                                             <  1:1085745/134‑1 (MQ=255)                                                                                                                  gCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCtggtg                                             >  2:1085745/1‑134 (MQ=255)                                                                                                                   ccAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCa                            >  2:1149939/1‑150 (MQ=255)                                                                                                                          gcAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCAGttcttg                     <  2:879871/150‑2 (MQ=255)                                                                                                                             aCCGGTGTGATTGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTTACCTGGGCGGATCCGTTCTTCGcc                  >  2:22373/1‑150 (MQ=255)                                                                                                                                 gtgtGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGGGCGGCAGTTCTTCGCCGGTc              >  1:706875/1‑150 (MQ=255)                                                                                                                                 gtgtGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCAACGGGGCGGATCAGTTCTTCGCCGTTc              >  1:436038/1‑150 (MQ=255)                                                                                                                                  tgtgATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCAGTTCTTCGCCGGTCg             >  2:901649/1‑150 (MQ=255)                                                                                                                                    tgATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCAGTTCTTCGCCGGTCggg           <  1:901649/150‑1 (MQ=255)                                                                                                                                        cGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCAGTTCTTCGCCGGTCGGGCCCt       <  1:954302/150‑1 (MQ=255)                                                                                                                                          aCCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCtcgtcgaggtcgatcacaccggttgcgccctggcctgaagctgcggcgttagtcacaaacacttgtacaggcagccgcccggcgcgctgtcgagggcacgct     <  1:459083‑M2/150‑103 (MQ=255)                                                                                                                                          aCCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCtcgtcgaggtcgatcacaccggttgcgccctggcctgaagctgcggcgttagtcacaaacacttgtacaggcagccgcccggcgcgctgtcgagggcacgct     <  1:536254‑M2/150‑103 (MQ=255)                                                                                                                                           ccTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCtcgtcgaggtcgatcacaccggttgcgccctggcctgaagctgcggcgttagtcacaaacacttgtacaggcagccgcccggcgcgctgtcgagggcacgctc    <  2:551941‑M2/150‑104 (MQ=255)                                                                                                                                            cTCGACGAACGAGCGGCCCGCACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCtt                                                         <  1:797578/96‑1 (MQ=255)                                                                                                                                            cTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCtt                                                         >  2:797578/1‑96 (MQ=255)                                                                                                                                             tCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCAGTTCTTCGCCGGTCGGGCCCTGGAAg  <  2:973345/150‑1 (MQ=255)                                                                                                                                               gacgaACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCAGttc                        <  2:723139/126‑1 (MQ=255)                                                                                                                                               gacgaACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCAGttc                        >  1:723139/1‑126 (MQ=255)                                                                                                                                                   |                                                                                                                                                AGGCCCAGGCCGTTGAGCAGTTGGAACAGGTACAAATCGAGCATGAGCGTGCCCTCGACAGCGCGCCGGGCGGCTGCCTGTACAAGTGTTTGTGACTAACGCCGCAGCTTCAGGCCAGGGCGCAACCGGTGTGATCGACCTCGACGAACGAGCGGCCCGAACTGATGACTTCGGCCAGGTCGTCCTCGTCGCGCATCTGCCCCTGGGGCTTGCCGCGCAGCAGGTAGTAGTCCTTGAGCACCTGGTGGTCACCCGGGCGGATCAGTTCTTCGCCGGTCGGGCCCTGGAAG  >  NC_002947/724590‑724879

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.