New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 901777	36 (0.730)	5 (0.110)	5/238	NT	11.6%	coding (163/963 nt)	trxB	thioredoxin reductase
	?	NC_002947	= 901795	42 (0.900)					coding (181/963 nt)	trxB	thioredoxin reductase

GTCATTCGCGCGTCATCATTCTCGGTTCCGGCCCTGCCGGTTACAGCGCTGCGGTGTATGCCGCCCGTGCCAACCTCAAGCCGCTGCTGATCACCGGCATGCAGGCGGGTGGCCAGCTGACCACCACCACCGAAGTCGACAACT‑‑‑‑‑GGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/901628‑901777 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggTCAGGCCGTGGGGGTCGCCCGGCCAGTTGTCGACTTCGGTGGTGGTGGTCAGCTGGCCACCCGCCTGCATGCCGGTGATCAGCAGCGGCTTGAGGTTGGCACGGGCGGCATACACCGCAGCGCTGTAACCGGCAGGGCCGGAACCGAGA  <  NC_002947/901795‑901647                                                                                                                                                                                                                                                                                                                  GTCATTCGCGCGTCATCATTCTCGGTTCCGGCCCTGCCGGTTACAGCGCTGCGGTGTATGCCGCCCGTGCCAACCTCAAGCCGCTGCTGATCACCGGCATGCAGGCGAGTGGCCAGCTGACCACCACCACCGAAGTCGACAACT‑‑‑‑‑GGCCGG                                                                                                                                                       >  2:218710/1‑150                                           ACAGCGCTGCGGTGTATGCCGCCCGTGCCAACCTCAAGCCGCTGCTGATCACCGGCATGCAGGCGGGTGGCCAGCTGACCACCACCACCGAAGTCGACAACTGGCCGGGCCGGTCAGGCCGTGGGGGTCGCCCGGCCAGTTGTCGACTTC                                                                                                                  <  2:819259/150‑1                                                                                     TGCTGATCACCGGCATGCAGGCGGGTGGCCAGCTGACCACCACCACCGAAGTCGACAACT‑‑‑‑‑GGCCGGTCAGGCCGTGGGGGTCGCCCGGCCAGTTGTC                                                                                                                        <  1:339218/97‑1                                                                                     TGCTGATCACCGGCATGCAGGCGGGTGGCCAGCTGACCACCACCACCGAAGTCGACAACT‑‑‑‑‑GGCCGGTCAGGCCGTGGGGGTCGCCCGGCCAGTTGTC                                                                                                                        >  2:339218/1‑97                                                                                         GATCACCGGCATGCAGGCGGGTGGCCAGCTGACCACCACCACCGAAGTCGACAACT‑‑‑‑‑GGCCGGTCAGGCCGTGGGGGTCGCCCGGCCA                                                                                                                              <  1:53214/87‑1                                                                                         GATCACCGGCATGCAGGCGGGTGGCCAGCTGACCACCACCACCGAAGTCGACAACT‑‑‑‑‑GGCCGGTCAGGCCGTGGGGGTCGCCCGGCCA                                                                                                                              >  2:53214/1‑87                                                                                                                                                         CGGTCAGGCCGTGGGGGTCGCCCGGCCAGTTGTCGACTTCGGTGGTGGTGGTCAGCTGGCCACCCGCCTGCATGCCGGTGATCAGCAGCGGCTTGAGGTTGGCACGGGCGGCATACACCGCAGCGCTGTAACCGGCAGGGCCGGAACCGA    >  2:724892/1‑150                                                                                                                                                           GTCAGGCCGTGGGGGTCGCCCGGCCAGTTGTCGACTTCGGTGGTGGTGGTCAGCTGGCCACCCGCCTGCATGCCGGTGATCAGCAGCGGCTTGAGGTTGGCACGGGCGGCATACACCGCAGCGCTGTAACCGGCAGGGCCGGAACCGAGA  >  1:131930/1‑150                                                                                                                                                           GTCAGGCCGTGGGGGTCGCCCGGCCAGTTGTCGACTTCGGTGGTGGTGGTCAGCTGGCCACCCGCCTGCATGCCGGTGATCAGCAGCGGCTTGAGGTTGGCACGGGCGGCATACACCGCAGCGCTGTAACCGGCAGGGCCGGAACCGAGA  <  2:272755/150‑1                                                                                                                                                                                                                                                                                                                  GTCATTCGCGCGTCATCATTCTCGGTTCCGGCCCTGCCGGTTACAGCGCTGCGGTGTATGCCGCCCGTGCCAACCTCAAGCCGCTGCTGATCACCGGCATGCAGGCGGGTGGCCAGCTGACCACCACCACCGAAGTCGACAACT‑‑‑‑‑GGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/901628‑901777 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggTCAGGCCGTGGGGGTCGCCCGGCCAGTTGTCGACTTCGGTGGTGGTGGTCAGCTGGCCACCCGCCTGCATGCCGGTGATCAGCAGCGGCTTGAGGTTGGCACGGGCGGCATACACCGCAGCGCTGTAACCGGCAGGGCCGGAACCGAGA  <  NC_002947/901795‑901647

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.