New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1000644	48 (0.980)	7 (0.150)	7/238	NT	13.4%	coding (302/681 nt)	PP_0862	PKHD‑type hydroxylase
	?	NC_002947	= 1000655	45 (0.960)					coding (313/681 nt)	PP_0862	PKHD‑type hydroxylase

ATGCACTGGCCAAGGAAATCGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1000491‑1000644 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccctTGGGCTGGCGCAGGGCATTGTCGATGTGGAAACCAAAGTTGCCGCCATCGCGGTAGCAGTTGATCAGCGGCGGGAACACCTTGTGCGGCAAGGCTGCCGACATGAAGCGCGGGGTCTTCCACAGGCGGTCGATCAGCGCAGTGCCGAT  <  NC_002947/1000655‑1000508                                                                                                                                                                                                                                                                                                                ATGCACTGGCCAAGGAAATCGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATG                                                                                                                                                          >  1:131313/1‑150   GCACTGGCCAAGGAAATCGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCC                                                                                                                                                        >  2:1266151/1‑150     ACTGGCCAAGGAAATCGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCT                                                                                                                                                      >  1:5398/1‑150                  ATCGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTTGGGCTGGCGCAG                                                                                                                                         >  1:407656/1‑150                   TCGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTTGGGCTGGCGCAGG                                                                                                                                        <  2:407656/150‑1                              CTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTTGGGCTGGCGCAGGGCATTGTCGAT                                                                                                                             <  2:131313/150‑1                                                                                    AAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTTGGGCTGGCGCAGGGCATTG                                                                                                                                  >  1:827201/1‑91                                                                                    AAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTTGGGCTGGCGCAGGGCATTG                                                                                                                                  <  2:827201/91‑1                                                                                      GGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTTGGGCTGGCGCAGGGCATTGT                                                                                                                                 <  2:477376/90‑1                                                                                      GGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTTGGGATGGCGCAGGGCATTGT                                                                                                                                 >  1:477376/1‑90                                                                                                                                                       CCCTTGGGCTGGCGCAGGGCATTGTCGATGTGGAAACCAAAGTTGCCGCCATCGCGGTAGCAGTTGATCAGCGGCGGGAACACCTTGTGCGGGCTGTCTGCCGACATGAAGCGCGGGGTCTTCCACAGGCGGTCGATCAGCGCAGTGCCG    >  1:655874/1‑150                                                                                                                                                       CCCTTGGGCTGGCGCAGGGCATTGTCGATGTGGAAACCAAAGTTGCCGCCATCGCGGTAGCAGTTGATCAGCGGCGGGAACACCTTGTGCGGCAAGGCTGCCGACATGAAGCGCGGGGTCTTCCACAGGCGGT                     <  1:161803/133‑1                                                                                                                                                       CCCTTGGGCTGGCGCAGGGCATTGTCGATGTGGAAACCAAAGTTGCCGCCATCGCGGTAGCAGTTGATCAGCGGCGGGAACACCTTGTGCGGCAAGGCTGCCGACATGAAGCGCGGGGTCTTCCACAGGCGGT                     >  2:161803/1‑133                                                                                                                                                         CTTGGGCTGGCGCAGGGCATTGTCGATGTGGAAACCAAAGTTGCCGCCATCGCGGTAGCAGTTGATCAGCGGCGGGCACACCTTATGCGGCAAGGCTGCCGACATGAAGCGCGGGGTCTTCCACAGGCGGTCGATCAGCGCAGTGCCGAT  >  1:1185064/1‑150                                                                                                                                                         CTTGGGCTGGCGCAGGGCATTGTCGATGTGGAAACCAAAGTTGCCGCCATCGCGGTAGCAGTTGATCAGCGGCGGGAACACCTTGTGCGGCAAGGCTGCCGACATGAAGCGCGGGGTCTTCCACAGGCGGTCGATCAGCGCA          <  1:1280459/142‑1                                                                                                                                                         CTTGGGCTGGCGCAGGGCATTGTCGATGTGGAAACCAAAGTTGCCGCCATCGCGGTAGCAGTTGATCAGCGGCGGGAACACCTTGTGCGGCAAGGCTGCCGACATGAAGCGCGGGGTCTTCCACAGGCGGTCGATCAGCGCA          >  2:1280459/1‑142                                                                                                                                                                                                                                                                                                                ATGCACTGGCCAAGGAAATCGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1000491‑1000644 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccctTGGGCTGGCGCAGGGCATTGTCGATGTGGAAACCAAAGTTGCCGCCATCGCGGTAGCAGTTGATCAGCGGCGGGAACACCTTGTGCGGCAAGGCTGCCGACATGAAGCGCGGGGTCTTCCACAGGCGGTCGATCAGCGCAGTGCCGAT  <  NC_002947/1000655‑1000508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.