New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1000644	48 (0.980)	7 (0.150)	7/238	NT	13.4%	coding (302/681 nt)	PP_0862	PKHD‑type hydroxylase
	?	NC_002947	= 1000655	45 (0.960)					coding (313/681 nt)	PP_0862	PKHD‑type hydroxylase

ACTGGCCAAGGAAATCGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGTGATCCAGGACACCTATGGCGTGCAGCAGATCAAGCTGGCCGCCGGTGACATG  >  NC_002947/1000495‑1000792                                                                                                                                                      |                                                                                                                                                     aCTGGCCAAGGAAATCGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCT                                                                                                                                                      >  1:5398‑M1/1‑150 (MQ=255)       cAAGGAAATCGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCa                                                                                                                                                >  1:528513/1‑150 (MQ=255)       cAAGGAAATCGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCa                                                                                                                                                <  1:612455/150‑1 (MQ=255)        aaGGAAATCGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCAGCGCTTCATGTCGGCAGCCTTGCAGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGACAg                                                                                                                                               >  2:10539/1‑150 (MQ=255)              aTCGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCATAAGGTGTGCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAag                                                                                                                                         >  1:1185064‑M2/1‑148 (MQ=255)              aTCGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTtgggctggcgcag                                                                                                                                         >  1:407656‑M1/1‑137 (MQ=255)               tCGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTtgggctggcgcagg                                                                                                                                        <  2:407656‑M1/150‑15 (MQ=255)                cGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGACAGCCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAaggg                                                                                                                                       >  1:655874‑M2/1‑146 (MQ=255)                     cTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGcc                                                                                                                                  <  1:517309/150‑1 (MQ=255)                      tGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGc                                                                                                                                              >  1:843321/1‑137 (MQ=255)                      tGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGc                                                                                                                                              <  2:843321/137‑1 (MQ=255)                      tGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAag                                                                                                                                         >  2:1280459‑M2/1‑140 (MQ=255)                      tGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAag                                                                                                                                         <  1:1280459‑M2/142‑3 (MQ=255)                          cTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTtgggctggcgcagggcattgtcgat                                                                                                                             <  2:131313‑M1/150‑26 (MQ=255)                          cTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAg                                                                                                                             <  2:528513/150‑1 (MQ=255)                            gATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCg                                                                                                                           <  1:788128/150‑1 (MQ=255)                             aTCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATTCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCgg                                                                                                                          <  1:1266151/150‑1 (MQ=255)                             aTCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCgg                                                                                                                          <  2:5398/150‑1 (MQ=255)                              tCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCggg                                                                                                                         >  1:1083516/1‑150 (MQ=255)                                 aCCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAaggg                                                                                                                                       <  1:161803‑M2/133‑5 (MQ=255)                                 aCCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAaggg                                                                                                                                       >  2:161803‑M2/1‑129 (MQ=255)                                     ccTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGCGCAGCTCGGAGCGGGTGCGTAc                                                                                                                  <  2:327790/150‑1 (MQ=255)                                         tgGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGAc                                                                                                              >  1:109971/1‑150 (MQ=255)                                           gAAGACCCCGCGCTTCATGTCGGCAACCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCt                                                                                                            >  1:304384/1‑150 (MQ=255)                                             aGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGt                                                                                                          <  2:1083516/150‑1 (MQ=255)                                                 cccGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTc                                                                                                      >  2:484439/1‑150 (MQ=255)                                                        ttCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTg                                                                                               <  2:1041150/150‑1 (MQ=255)                                                             gTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTCTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTc                                                                                            >  1:440321/1‑148 (MQ=255)                                                             gTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTCTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTc                                                                                            <  2:440321/148‑1 (MQ=255)                                                               cGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCa                                                                                        <  1:1273086/150‑1 (MQ=255)                                                                ggCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAg                                                                                       <  2:1220295/150‑1 (MQ=255)                                                                            gCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCa                                                                                        >  2:899645/1‑137 (MQ=255)                                                                            gCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCa                                                                                        <  1:899645/137‑1 (MQ=255)                                                                            gCACAAGGTGTTCCCCCCGCTGATCAACTGCGACAGCGATGGCGGCAACTTTGGTGTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAg                                                                           >  2:656596/1‑150 (MQ=255)                                                                                aaGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTtgggctggcgcagggcattg                                                                                                                                  <  2:827201‑M1/91‑21 (MQ=255)                                                                                aaGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTtgggctggcgcagggcattg                                                                                                                                  >  1:827201‑M1/1‑71 (MQ=255)                                                                                  ggTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTtgggctggcgcagggcattgt                                                                                                                                 <  2:477376‑M1/90‑22 (MQ=255)                                                                                  ggTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTtgggatggcgcagggcattgt                                                                                                                                 >  1:477376‑M1/1‑69 (MQ=255)                                                                                  ggTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTacga                                                                     >  2:1263814/1‑150 (MQ=255)                                                                                  ggTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTacga                                                                     >  2:753970/1‑150 (MQ=255)                                                                                   gtgtTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACGTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCCAGGGCAGCCCGGAGCGCGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCCGCGACCCGCCAAGCTacgac                                                                    >  2:205526/1‑150 (MQ=255)                                                                                         ccgccgCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAGGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGt                                                              <  1:1047968/150‑1 (MQ=255)                                                                                         ccgccgCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTacg                                                                      >  1:1260061/1‑142 (MQ=255)                                                                                         ccgccgCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTacg                                                                      <  2:1260061/142‑1 (MQ=255)                                                                                         ccgccgCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGAcggcg                                                                <  2:1036981/148‑1 (MQ=255)                                                                                         ccgccgCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGAcggcg                                                                >  1:1036981/1‑148 (MQ=255)                                                                                              gcTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCt                                                         >  2:222900/1‑150 (MQ=255)                                                                                                 gATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCAACTGTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGt                                                      >  1:461966/1‑150 (MQ=255)                                                                                                  aTCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGTg                                                     >  2:698447/1‑150 (MQ=255)                                                                                                   tCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGTGa                                                    >  2:1025029/1‑150 (MQ=255)                                                                                                       cTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGTGATCCa                                                <  1:1025029/150‑1 (MQ=255)                                                                                                              cgcgATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGTGATCCAGGACAcc                                         >  1:610006/1‑150 (MQ=255)                                                                                                                cgATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGTGATCCAGGACACCTa                                       >  1:885120/1‑150 (MQ=255)                                                                                                                  aTGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGTGATCCAGGACACCTATg                                     >  2:405828/1‑150 (MQ=255)                                                                                                                    ggcggcAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGTGATCCAGGACACCTATGGc                                   <  2:992122/150‑1 (MQ=255)                                                                                                                      cggcAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGTGATCCAGGACACCTATGGCGt                                 <  1:10539/150‑1 (MQ=255)                                                                                                                                   ttCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTGCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGTGATCCAGGACACCTATGGCGTGcagcaggtcgag                    <  2:304384/150‑7 (MQ=255)                                                                                                                                    tCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGTGATCCAGGACACCTATGGCGTGCAGCAGATCAAGc                   >  1:1064534/1‑150 (MQ=255)                                                                                                                                         aTCGACAATGCCCTGCGCCAGCCCAagggcattgtcgatgtggaaaccaaagttgccgccatcgcggtagcagttgatcagcggcgggaacaccttgtgcggcaaggctgccgacatgaagcgcggggtcttccacaggcggtcgatcag              <  2:131313‑M2/150‑126 (MQ=255)                                                                                                                                          tCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGTGATCCAGGACACCTATGGCGTgca                              >  1:923328/1‑133 (MQ=255)                                                                                                                                          tCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTCTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGTGATCCAGGACACCTATGGCGTgca                              <  2:923328/133‑1 (MQ=255)                                                                                                                                             aCAATGCCCTGCGCCATCCCAagggcattgtcgatgtggaaaccaaagttgccgccatcgcggtagcagttgatcagcggcgggaacacc                                                                      >  1:477376‑M2/1‑21 (MQ=255)                                                                                                                                             aCAATGCCCTGCGCCAGCCCAagggcattgtcgatgtggaaaccaaagttgccgccatcgcggtagcagttgatcagcggcgggaacacc                                                                      <  2:477376‑M2/90‑70 (MQ=255)                                                                                                                                             aCAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGTGATCCAGGACACCTATGGCGTGCAGCAGATCAAGCTGGccgccg          <  2:1064534/150‑1 (MQ=255)                                                                                                                                              cAATGCCCTGCGCCAGCCCAagggcattgtcgatgtggaaaccaaagttgccgccatcgcggtagcagttgatcagcggcgggaacacctt                                                                    >  1:827201‑M2/1‑20 (MQ=255)                                                                                                                                              cAATGCCCTGCGCCAGCCCAagggcattgtcgatgtggaaaccaaagttgccgccatcgcggtagcagttgatcagcggcgggaacacctt                                                                    <  2:827201‑M2/91‑72 (MQ=255)                                                                                                                                                 tGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGTGATCCAGGACACCTATGGCGTGCAGCAGATCAAGCTGGCCGCCGGTGa      <  1:484439/150‑1 (MQ=255)                                                                                                                                                   cccTtgggctggcgcagggcattgtcgatgtggaaaccaaagttgccgccatcgcggtagcagttgatcagcggcgggaacaccttgtgcgggctgtctgccgacatgaagcgcggggtcttccacaggcggtcgatcagcgcagtgccg    >  1:655874‑M1/1‑4 (MQ=255)                                                                                                                                                   cccTtgggctggcgcagggcattgtcgatgtggaaaccaaagttgccgccatcgcggtagcagttgatcagcggcgggaacaccttgtgcggcaaggctgccgacatgaagcgcggggtcttccacaggcggt                     <  1:161803‑M1/133‑130 (MQ=255)                                                                                                                                                   cccTtgggctggcgcagggcattgtcgatgtggaaaccaaagttgccgccatcgcggtagcagttgatcagcggcgggaacaccttgtgcggcaaggctgccgacatgaagcgcggggtcttccacaggcggt                     >  2:161803‑M1/1‑4 (MQ=255)                                                                                                                                                    ccTGCGCCAGCCCAagggcattgtcgatgtggaaaccaaagttgccgccatcgcggtagcagttgatcagcggcgggaacaccttgtgcggcaaggctgccgacatgaagcgcggggtcttccacaggcggtcgatcagcgcagtgccga   <  2:407656‑M2/150‑137 (MQ=255)                                                                                                                                                     cTtgggctggcgcagggcattgtcgatgtggaaaccaaagttgccgccatcgcggtagcagttgatcagcggcgggcacaccttatgcggcaaggctgccgacatgaagcgcggggtcttccacaggcggtcgatcagcgcagtgccgat  >  1:1185064‑M1/1‑2 (MQ=255)                                                                                                                                                     cTtgggctggcgcagggcattgtcgatgtggaaaccaaagttgccgccatcgcggtagcagttgatcagcggcgggaacaccttgtgcggcaaggctgccgacatgaagcgcggggtcttccacaggcggtcgatcagcgca          <  1:1280459‑M1/142‑141 (MQ=255)                                                                                                                                                     cTtgggctggcgcagggcattgtcgatgtggaaaccaaagttgccgccatcgcggtagcagttgatcagcggcgggaacaccttgtgcggcaaggctgccgacatgaagcgcggggtcttccacaggcggtcgatcagcgca          >  2:1280459‑M1/1‑2 (MQ=255)                                                                                                                                                     cTGCGCCAGCCCAagggcattgtcgatgtggaaaccaaagttgccgccatcgcggtagcagttgatcagcggcgggaacaccttgtgcggcaaggctgccgacatgaagcgcggggtcttccacaggcggtcgatcagcgcagtgccgat  >  1:407656‑M2/1‑13 (MQ=255)                                                                                                                                                      |                                                                                                                                                     ACTGGCCAAGGAAATCGGCACTGCGCTGATCGACCGCCTGTGGAAGACCCCGCGCTTCATGTCGGCAGCCTTGCCGCACAAGGTGTTCCCGCCGCTGATCAACTGCTACCGCGATGGCGGCAACTTTGGTTTCCACATCGACAATGCCCTGCGCCAGCCCAAGGGCAGCCCGGAGCGGGTGCGTACCGACCTGTCTTCCACGCTGTTCCTCAGCGACCCGGAAAGCTACGACGGCGGTGAGCTGGTGATCCAGGACACCTATGGCGTGCAGCAGATCAAGCTGGCCGCCGGTGACATG  >  NC_002947/1000495‑1000792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.