| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1273270 | 38 (0.770) | 6 (0.140) | 6/220 | NT | 14.4% | intergenic (+55/+113) | PP_1113/PP_1114 | pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein |
| ? | NC_002947 | = 1273329 | 38 (0.880) | intergenic (+114/+54) | PP_1113/PP_1114 | pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein | |||||
ACCCGCGGTATGTCGAGACCACCCTGGTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1273118‑1273270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actgtgggagcgggcGCGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGTCGCCTGCTTCGCGGGCTTGCCCGCTCCCACAGTTTCCGTGCCAGCCTCTGGA < NC_002947/1273329‑1273237 ACNCGCGGTATGTCGAGACCACCCTGGNGACCATCGCCTANGATGCCNGNCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCG > 1:894722/1‑150 CCCGCGGTATGTCGAGACCACCCTGGTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGG < 2:182249/150‑1 CCGCGGTATGTCGAGACCACCCTGGTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGG > 2:971480/1‑150 TCGAGACCACCCTGGTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGA > 1:575062/1‑135 TCGAGACCACCCTGGTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGA < 2:575062/135‑1 CACCCTGGTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCGCGCCCGCGAACACGG > 1:392128/1‑150 CGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCTCGAACACTGTGGGAGCGGTCGCGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGTCG > 2:280081/1‑150 ACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCGCGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGTCGCCTGCTTCGCG < 1:130006/150‑1 GGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGG < 1:649851/85‑1 GGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGG > 2:649851/1‑85 GCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCGCGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGTCGCCTGCTTCGCGGGCTTGCCCGCTCCCAC < 2:392128/150‑1 CAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCGCGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGTCGCCTGCTTCGCGGGCTTGCCCGCTCCCACA < 1:8668/150‑1 AGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCTCGAACACTGTGGGAGCGGGCGCGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGTCGCCTGCTTCGCGGGCTTGCCCGCTCCCACAGTTTCCGTGCCAGCCTCTGGA < 1:280081/150‑1 GGGAGCGGGCGCGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGTCGCCTGCTTCGCGGGCTTGCCCGCTCCCACAGTTTCCGT > 1:811549/1‑90 GGGAGCGGGCGCGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGTCGCCTGCTTCGCGGGCTTGCCCGCTCCCACAGTTTCCGT < 2:811549/90‑1 ACCCGCGGTATGTCGAGACCACCCTGGTGACCATCGCCTATGATGCCGGCCTCTGGTACCAGGACCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1273118‑1273270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actgtgggagcgggcGCGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGTCGCCTGCTTCGCGGGCTTGCCCGCTCCCACAGTTTCCGTGCCAGCCTCTGGA < NC_002947/1273329‑1273237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |