| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1273270 | 38 (0.770) | 6 (0.140) | 6/220 | NT | 14.4% | intergenic (+55/+113) | PP_1113/PP_1114 | pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein |
| ? | NC_002947 | = 1273329 | 38 (0.880) | intergenic (+114/+54) | PP_1113/PP_1114 | pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein | |||||
GGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTACGGCCAACGTCCTTCAGGGCGTTGCGT > NC_002947/1273199‑1273467 | ggCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTc < 2:986305/150‑1 (MQ=255) gAAAGGGCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAg > 1:248046/1‑150 (MQ=255) aCCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGAtttt > 2:886290/1‑150 (MQ=255) aCCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGAAGCGGGCAAGCACGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGATCGAGCTATCTCTCAGAtttt > 2:525782/1‑150 (MQ=255) gtCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGACATCTCTCAGATTTTTATcgc < 2:1277984/150‑1 (MQ=255) tCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATcgcg > 1:1205087/1‑150 (MQ=255) tCAGGCTCATGATCCAGAGGCTGGCACGCAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATcgcg > 1:411950/1‑150 (MQ=255) cAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGt < 1:963420/150‑1 (MQ=255) cATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCg > 2:117763/1‑150 (MQ=255) aTGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGa > 2:541949/1‑150 (MQ=255) tCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCgcccgctcccacagtgttcgagccagcctctggatcatgagcctgacacaggtggct < 1:280081‑M2/150‑58 (MQ=255) ccAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAgg > 2:638643/1‑150 (MQ=255) gacggCACGGAACCTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGTACGGGCTTCGCGCGTGTTCGCGGGCGCGCGCGCTCCCACAGTGTTCGAGCCATTTCTCAGATTTTTATCGCGGCCGTCGATCAGGCGCCGt < 2:346957/147‑1 (MQ=255) cTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTg < 2:1205087/150‑1 (MQ=255) ggCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGc < 1:971480/150‑1 (MQ=255) aCGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCgcccgctccc > 1:811549‑M2/1‑80 (MQ=255) aCGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCgcccgctccc < 2:811549‑M2/90‑11 (MQ=255) cGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACTGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCActt < 2:75636/150‑1 (MQ=255) aaaCTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCActtctt < 1:117763/150‑1 (MQ=255) aaCTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTg < 1:638643/150‑1 (MQ=255) tgtgGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCgcccgctcccacagtttccgtgccagcctctggatcatgagcctgacacaggtggctacgcggcctttcgccggtttg < 1:8668‑M2/150‑79 (MQ=255) tgtgGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTAc < 1:507981/150‑1 (MQ=255) tgtgAGAGCGGGCAAGCCGGCGAAGCAGGCGACGCGGTTGAGGGCACGGTCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCCCTGAGATTTCTATCGCGTTAGTGGATCAGGCGCCGTGGCACTTCTTGTAc > 2:403383/1‑150 (MQ=37) gtgGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCgcccgctcccacagtttccgtgccagcctctggatcatgagcctgacacaggtggctacgcggcctttcgccggtttgc < 2:392128‑M2/150‑80 (MQ=255) tgGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTActt < 2:668825/150‑1 (MQ=255) gCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCAtctc > 1:469936/1‑90 (MQ=255) gCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCAtctc < 2:469936/90‑1 (MQ=255) cgcgAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCgcccgctcccacagtttccgtgccagcctctggatcatgagcctgacacaggtggctacgcggcctttcgccggtttgcccccaacaggtcctggt < 1:130006‑M2/150‑97 (MQ=255) aaGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCgcacgggc < 1:541949/150‑1 (MQ=255) gCAGGCGACGCGGTGGATGGCACGGTCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCgcacgggcac < 2:411950/150‑1 (MQ=255) cgcaaCGGGGTGGAGCGCACTGGCGTCGCCCGTGTTCTCGGGCGTTCCCTCTCCCACAGTGTTCGAGCCATCTCTAAGATTTTTATCGCGTCAGTCCATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGcacgggcacggg < 2:248046/146‑1 (MQ=255) cGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCgaccgctcccacagtgttcgagccagcctctggatcatgagcctgacacaggtggctacgcggcctttcgccggtttgcccccaacaggtcctggtaccagaggccg > 2:280081‑M2/1‑43 (MQ=255) gACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGCCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCg > 1:612524/1‑150 (MQ=255) ggTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTACg < 1:886290/150‑1 (MQ=255) gATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTAcc < 2:318918/125‑1 (MQ=255) gATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTAcc > 1:318918/1‑125 (MQ=255) tGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTACGGCCAAc < 1:1155755/150‑1 (MQ=255) ttCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGCCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTACGGCCAACGTACTTCAgg < 2:612524/150‑1 (MQ=255) cccGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTc < 2:831106/124‑1 (MQ=255) cccGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTc > 1:831106/1‑124 (MQ=255) ccGTGTTCGCGGGCGCgcccgctcccacagtttccgtgccagcctctggatcatgagcctgacacaggtggctacgcggcctttcgccggtttgcccccaacaggtcctggtaccagaggccggcatcataggcgatggtcaccagggtg > 1:392128‑M2/1‑16 (MQ=255) ccGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTACGGCCAACGTCCTTCAGGGCGtt > 2:417480/1‑150 (MQ=255) ccGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGACACAGGTCGCTACGGCCAACGTCCTTCAGGGCGtt > 2:782397/1‑150 (MQ=255) gtcgtCGCGGCCTCGCCCCCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTACGGCCAACGTCCTTCAGGGCGTTGc < 1:1013620/146‑1 (MQ=255) gtTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTACGGCCAACGTCCTTCAGGGCGTTGCGt > 1:322120/1‑150 (MQ=255) ggagcgGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTACGGCCAACGTCCtt < 2:294682/133‑1 (MQ=255) ggagcgGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTACGGCCAACGTCCtt > 1:294682/4‑136 (MQ=255) | GGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGCCATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTACGGCCAACGTCCTTCAGGGCGTTGCGT > NC_002947/1273199‑1273467 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |