| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1443111 = | 48 (0.980) | 17 (0.430) | 14/200 | NT | 36.4% | intergenic (‑42/+134) | ghrB/PP_1262 | 2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator |
| ? | NC_002947 | 1443179 = | 21 (0.540) | intergenic (‑110/+66) | ghrB/PP_1262 | 2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator | |||||
GGCAGACCTGAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCG‑CCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1443284‑1443111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggcttgcccgcgaaggTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAG > NC_002947/1443179‑1443322 GGCAGACCTGAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCG‑CCCCCCCG > 1:789458/1‑150 CTGAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCG‑CCCCCCCGTAGGAGC < 1:1148117/150‑1 TGAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCTAGCCCCCCCCTACAAGGCACCGCG‑CCCCCCCGTCCGAGCG > 2:1254161/1‑150 AAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCG‑CCCCCCCGTAGGAGCGG < 2:980702/149‑1 AAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCG‑CCCCCCCGTAGGAGCGG > 1:980702/1‑149 CCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCG‑CCCCCCCGTAGGAGCGGG > 1:374538/1‑128 CCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCATACAAGGCACCGCG‑CCCCCCCGTAGGAGCGGG < 2:374538/128‑1 ACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCG‑CCCCCCCGTAGGAGCGGGCTT > 1:539261/1‑128 ACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCG‑CCCCCCCGTAGGAGCGGGCTT < 2:539261/128‑1 TTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCG‑CCCCCCCGGAGGGGCGGGCTTGCCCGCGAAGGGACCAGCACAGGCGAAAACAATGGTTAGCAACCTGCCATTGTCCGCCCCCGCATTGCAGCGGCTTT > 1:307392/1‑150 CTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCG‑CCCCCCCGTAGGCGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTACCAACCTACAATTGTCCGCCCCCGCATTGCAGCAGCTTCGTACTCGGCGCGCAGCA > 2:159376/1‑150 AAGCCCGCTCCTACAAGGCACCGCG‑CCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGT > 1:279230/1‑150 GCCCGCTCCTACAAGGCACCGCG‑CCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTT > 1:1216732/1‑150 GCCCGCTCCTACAAGGCACCGCG‑CCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTT > 2:1020891/1‑150 CCCGCTCCTACAAGGCACCGCG‑CCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTT > 2:285153/1‑150 CCCGCTCCTACAAGGCACCGCG‑CCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTT < 1:285153/150‑1 cggTCCTACAGGGCACCGGG‑CCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGGACCAGCACAGGCGAAATCAATGGTTAGCAAGCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCA < 2:307392/147‑1 GCTCCTACAAGGCACCGCGCCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGAT < 2:71912/130‑1 GCTCCTACAAGGCACCGCGCCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGAT > 1:71912/1‑130 GCTCCTACAAGGCACCGCG‑CCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAG > 1:1170300/1‑150 CCTACAAGGCACCGCG‑CCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTC < 1:159376/150‑1 ACAAGGCACCGCG‑CCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGC > 1:184903/1‑150 CAAGGCACCGCG‑CCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTA < 2:1213133/71‑1 CAAGGCACCGCG‑CCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTA > 1:1213133/1‑71 CCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAA < 1:1020891/150‑1 CCCCCCGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAA < 2:1216732/150‑1 ggcAGCGGGCTTGCCCGCGACGGTACCGGAACAGGCGAACCCAATGGTTAGCAACCTACCATCGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCT < 1:511792/147‑1 AGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGC < 2:992856/134‑1 AGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGC > 1:992856/1‑134 GCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGA < 1:913051/150‑1 GCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGA > 1:368090/1‑150 ccccagGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATTAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGC < 1:64837/144‑1 GCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCA < 2:548544/150‑1 ctAAGGTGCCGGAACAGGCGAAATCAATGGTTAGAAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAG < 1:525531/148‑1 GGCAGACCTGAAAACCCATCAGGTGCTGATCGCCAACTAAAAAGCTGCTGCAATGCGGGGGCGGACAATGGTAGGTTGCTAACCATTGATTTCGCCTGTTCCGGCACCTTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCG‑CCCCCCCGTAGGAGCGGGCTTGCCCGCGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1443284‑1443111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggcttgcccgcgaaggTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAG > NC_002947/1443179‑1443322 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |