New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1542794 | 50 (1.020) | 3 (0.060) | 3/236 | NT | 6.1% | coding (532/849 nt) | PP_1353 | membrane protein |
? | NC_002947 | = 1542815 | 45 (0.970) | coding (553/849 nt) | PP_1353 | membrane protein |
CCGCCCGTTCCGTATCGGTGACTGGATCGAGGCGCAGGGCGTTGCCGGCACCGTCGACAGTATCCAGATCTTCCACACCGTGCTGCGCACCGGTGACAACAAGACGGTCATCATGCCCAATGGCAGCCTGTCCAACGGCATCATTACCAACACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1542640‑1542794 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacaccaCCTTGCGCGTCGGCTGGCGGTTGGTGTTGGTAATGATGCCGTTGGACAGGCTGCCATTGGGCATGATGACCGTCTTGTTGTCACCGGTGCGCAGCACGGTGTGGAAGATCTGGATACTGTCGACGGTGCCGGCAACGCCCTGC < NC_002947/1542815‑1542673 CCGCCCGTTCCGTATCGGTGACTGGATCGAGGCGCAGGGCGTTGCCGGCACCGTCGACAGTATCCAGATCTTCCACACCGTGCTGCGCACCGGTGACAACAAGACGGTCATCATGCCCAATGGCAGCCTGTCCAACGGCATCATTACCAA < 2:1269237/150‑1 AGGGCGTTGCCGGCACCGTCGACAGTATCCAGATCTTCCACACCGTGCTGCGCACCGGTGACAACAAGACGGTCATCATGCCCAATGGCAGCCTGTCCAACGGCATCATTACCAACACCACCTTGCGCGTCGGCTGGCGGTTGGTGTTGG < 2:908784/150‑1 GCACCGTCGACAGTATCCAGATCTTCCACACCGTGCTGCGCACCGGTGACAACAAGACGGTCATCATGCCCAATGGCAGCCTGTCCAACGGCATCATTACCAACACCACCTTGCGCGTCGGCTGGCGGTTGGTGTTGGT > 1:1018361/1‑139 GCACCGTCGACAGTATCCAGATCTTCCACACCGTGCTGCGCACCGGTGACAACAAGACGGTCATCATGCCCAATGGCAGCCTGTCCAACGGCATCATTACCAACACCACCTTGCGCGTCGGCTGGCGGTTGGTGTTGGT < 2:1018361/139‑1 AACACCACCTTGCGCGTCGGCTGGCGGTTGGTGTTGGTAATGATGCCGTTGGACAGGCTGCCATTGGGCATGATGAACGTCTTGTTGTCACCGGTGCATTTTACGTTTTGGAATATCTGGATACTGTCGACGGTGCCGGCAACGCCCTGC < 1:24432/150‑1 CCACCTTGCGCGTCGGCTGGCGGTTGGTGTTGGTAATGATGCCGTTGGACAGGCTGCCATTGGGCATGATGACCGTCTTGTTGTCACCGGTGCGCAGCACGGT < 1:945201/103‑1 CCACCTTGCGCGTCGGCTGGCGGTTGGTGTTGGTAATGATGCCGTTGGACAGGCTGCCATTGGGCATGATGACCGTCTTGTTGTCACCGGTGCGCAGCACGGT > 2:945201/1‑103 CCGCCCGTTCCGTATCGGTGACTGGATCGAGGCGCAGGGCGTTGCCGGCACCGTCGACAGTATCCAGATCTTCCACACCGTGCTGCGCACCGGTGACAACAAGACGGTCATCATGCCCAATGGCAGCCTGTCCAACGGCATCATTACCAACACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1542640‑1542794 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacaccaCCTTGCGCGTCGGCTGGCGGTTGGTGTTGGTAATGATGCCGTTGGACAGGCTGCCATTGGGCATGATGACCGTCTTGTTGTCACCGGTGCGCAGCACGGTGTGGAAGATCTGGATACTGTCGACGGTGCCGGCAACGCCCTGC < NC_002947/1542815‑1542673 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |