New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2045058 =	50 (1.020)	6 (0.120)	5/248	NT	10.1%	coding (229/1941 nt)	PP_1819	methyl‑accepting chemotaxis transducer
	?	NC_002947	2045091 =	57 (1.170)					coding (262/1941 nt)	PP_1819	methyl‑accepting chemotaxis transducer

GACCAAACCCTGCAGGCCGCCACGCAAAGCGTCGGCCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2045099‑2045058 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGTTTGGTCGAACGCGCCCGAGGCCTGCCGGCGCTGGCAGCGGCACAAACCGATCTCGCCGCCTATGGCCAGGCATTCGAAGCCTTTGTCGAGGCCGTGCAAGCCAA  >  NC_002947/2045091‑2045197                                                                                                                                                       GACCAAACCCTGCAGGCCGCCACGCAAAGCGTCGGCCTGCTGGGTTTGGTCGAACGCGCCCGAGGCCTGCCGGCGCTGGCAGCGGCACAAACCGATCTCGCCGCCTATGGCCAGGCATTCGAAGCCTTTGTCGAGGCCGTGCAAGCCAA  <  1:1187650/149‑1 GACCAAACCCTGCAGGCCGCCACGCAAAGCGTCGGCCTGCTGGGTTTGGTCGAACGCGCCCGAGGCCTGCCGGCGCTGGCAGCGGCACAAACCGATCTCGCCGCCTATGGCCAGGCATTCGAAGCCTTTGTCGAGGCCGTGCAAGCCAA  >  2:1187650/1‑149              AGGCCGCCACGCAAAGCGTCGGCCTGCTGGGTTTGGTCGAACGCGCC                                                                                           <  1:468305/47‑1              AGGCCGCCACGCAAAGCGTCGGCCTGCTGGGTTTGGTCGAACGCGCC                                                                                           >  2:468305/1‑47              AGGCCGCCACGCAAAGCGTCGGCCTGCAGGGTTTGGTCGAACGCGCCCGAGGCCTGCCGGCGCTGGCAGCGGCACAAAC                                                           >  1:1052962/1‑79              AGGCCGCCACGCAAAGCGTCGGCCTGCAGGGTTTGGTCGAACGCGCCCGAGGCCTGCCGGCGCTGGCAGCGGCACAAAC                                                           <  2:1052962/79‑1                                                                                                                                                       GACCAAACCCTGCAGGCCGCCACGCAAAGCGTCGGCCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2045099‑2045058 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGTTTGGTCGAACGCGCCCGAGGCCTGCCGGCGCTGGCAGCGGCACAAACCGATCTCGCCGCCTATGGCCAGGCATTCGAAGCCTTTGTCGAGGCCGTGCAAGCCAA  >  NC_002947/2045091‑2045197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.