New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2661073 = | 44 (0.900) | 3 (0.060) | 3/244 | NT | 6.4% | intergenic (‑153/‑154) | PP_2332/PP_2333 | hypothetical protein/GntR family transcriptional regulator |
? | NC_002947 | 2661095 = | 45 (0.940) | intergenic (‑175/‑132) | PP_2332/PP_2333 | hypothetical protein/GntR family transcriptional regulator |
AACTAGCGAAACAAGACCTGCAAGTCAAAGACAAAATGAACATTGTCGACAATCGTCTAATCGCGAACTATCACCACTTCAACGCTGTCAGATCGCGCACCGCTGGCGTCAAGACGTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2661194‑2661073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgGTGCGCGATCTGACAGCGTTGAAGTGGT > NC_002947/2661095‑2661122 AACTAGCGAAACAAGACCTGCAAGACAAAGACAAAATGAACATTGTCGACAATCGTCTAATCGCGAACTATCACCACTTCAACGCTGTCAGATCGCGCACCGCCGACGTCTTGACGCCAGCGGTGCGCGATCTGACAGCGTTGAAGTGGT < 2:1202624/150‑1 GAACATTGTCGACAATCGTCTAATCGCGAACTATCACCACTTCAACGCTGTCAGATCGCGCACCGCCGACGTCTTGACGCCAGCGGTGCGCGATCTGACAGCGTT > 1:650723/1‑105 GAACATTGTCGACAATCGTCTAATCGCGAACTATCACCACTTCAACGCTGTCAGATCGCGCACCGCCGACGTCTTGACGCCAGCGGTGCGCGATCTGACAGCGTT < 2:650723/105‑1 AACTAGCGAAACAAGACCTGCAAGTCAAAGACAAAATGAACATTGTCGACAATCGTCTAATCGCGAACTATCACCACTTCAACGCTGTCAGATCGCGCACCGCTGGCGTCAAGACGTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2661194‑2661073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgGTGCGCGATCTGACAGCGTTGAAGTGGT > NC_002947/2661095‑2661122 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |