New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2676216	50 (1.020)	3 (0.070)	3/222	NT	5.9%	intergenic (‑39/‑199)	PP_2344/PP_2345	hypothetical protein/hypothetical protein
	?	NC_002947	= 2676262	52 (1.190)					intergenic (‑85/‑153)	PP_2344/PP_2345	hypothetical protein/hypothetical protein

ACCCGCCGCGCCCGGCAATACCCCGACATCGGCCGCCTGCAGGCCACGCTCGCGGATGTGTCGCAAGGCACGCTGGCCGGCCTTGAAGGTGAGGGCGGGGTATTTGATGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTGTGCTGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2676055‑2676216 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccttgtgctgcgaAAGGGCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCAGCACAAGGCTGCTCCTATGCCCAAGAGACCCGCCATGAGCGCCATCCACATCAAATACCCCGCCCTCACCTTCAAGGCCGGCCAGCGTGCCTTGCGA  <  NC_002947/2676262‑2676115                                                                                                                                                                                                                                                                                                                        ACCCGCCGCGCCACGCAATACCCCGACATCGGCCGCCTGCAGGCCACGCTCGCGGATGTGTCGCAAGGCACGCTGGCCGGCCTTGAAGGTGAGGGCGGGGTATTTGCTGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGC                                                                                                                                                                  <  1:265426/150‑1    CGCCGCGCCCGGCAATACCCCGACATCGGCCGCCTGCAGGCCACGCTCGCGGATGTGTCGCAAGGCACGCTGGCCGGCCTTGAAGGTGAGGGCGGGGTATTTGATGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTT                                                                                                                                                               <  1:405531/150‑1     GCCGCGCCCGGCAATACCCCGACATCGGCCGCCTGCAGGCCACGCTCGCGGATGTGTCGCAAGGCACGCTGGCCGGCCTTGAAGGTGAGGGCGGGGTATTTGATGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTG                                                                                                                                                              >  2:1115244/1‑150                                                                   GGCACGCTGGCCGGCCTTGAAGGTGAGGGCGGGGTATTTGATGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTGTGCTGCGAAAGGGCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCAGCA                                                                                                <  1:809412/150‑1                                                                                                                                       TGGGCATAGGAGCAGCCTTGTGCTGCGAAAGGGCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGG                                                                                                            <  1:953982/70‑1                                                                                                                                       TGGGCATAGGAGCAGCCTTGTGCTGCGAAAGGGCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGG                                                                                                            >  2:953982/1‑70                                                                                                                                                     GCCTTGTGCTGCGAAAGGGCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCAGCACAAGGCTGCTCCTATGCCCAAGAGACCCGCCATGAGCGCCATCCACATCAAATACCCCGCCCTCACCTTCAAGGCCGGCCAG              >  1:325960/1‑150                                                                                                                                                      CCTTGTGCTGCGAAAGGGCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTAGAAGCACAAGCCTGTGGTGAAGCCGAAGAGACCGGCCATGAGCGCCATCCACATCAAATACACCGCCCTCACCTTCAAGGCCGGCCAGC             >  1:1119481/1‑150                                                                                                                                                            GCTGCGAAAGGGCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCAGCACAAGGCTGCTCCTATGCCCAAGAGACCCGCCATGAGC                                                           >  1:1217531/1‑98                                                                                                                                                            GCTGCGAAAGGGCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCAGCACAAGGCTGCTCCTATGCCCAAGAGACCCGCCATGAGC                                                           <  2:1217531/98‑1                                                                                                                                                              TGCGAAAGGGCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCAGCACAAGGCTGCTCCTATGCCCAAGAGACCCGCCATGAGCGCCATCCACATCAAA                                            >  1:938963/1‑111                                                                                                                                                              TGCGAAAGGGCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCAGCACAAGGCTGCTCCTATGCCCAAGAGACCCGCCATGAGCGCCATCCACATCAAA                                            <  2:938963/111‑1                                                                                                                                                               GCGAAAGGGCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCAGCACAAGGCTGCTCCTATGCCCAAGAGACCCGCCATGAGCGCCATCCACATCAAATACCCCGCCCTCACCTTCAAGGCCGGCCAGCGTGCCTTGC    <  2:325960/150‑1                                                                                                                                                                 GAAAGGGCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCAGCACAAGGCTGCTCCTATGCCCAAGAGACCCGCCATGAGCGCCATCCACATCAAATACCCCGCCCTCACCTTCAAGGCCGGCCAGCGTGCCTTGCGA  <  2:766924/150‑1                                                                                                                                                                                                                                                                                                                        ACCCGCCGCGCCCGGCAATACCCCGACATCGGCCGCCTGCAGGCCACGCTCGCGGATGTGTCGCAAGGCACGCTGGCCGGCCTTGAAGGTGAGGGCGGGGTATTTGATGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTGTGCTGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2676055‑2676216 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccttgtgctgcgaAAGGGCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCAGCACAAGGCTGCTCCTATGCCCAAGAGACCCGCCATGAGCGCCATCCACATCAAATACCCCGCCCTCACCTTCAAGGCCGGCCAGCGTGCCTTGCGA  <  NC_002947/2676262‑2676115

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.