New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2801748 | 57 (1.160) | 4 (0.080) | 4/242 | NT | 7.1% | coding (89/1575 nt) | rbsA‑I | ribose ABC transporter ‑ ATP‑binding subunit |
? | NC_002947 | = 2801807 | 50 (1.050) | coding (148/1575 nt) | rbsA‑I | ribose ABC transporter ‑ ATP‑binding subunit |
TCATCACCAAGAAGCCCTGATGCTGCCAGGAGAATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2801641‑2801748 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgtTCTCGCCGGTCAGGGCCAGCACTTCGCCCGCGCGCAGGCTCAGGCTGACCTCGCCGAGTACGGGCTGGGCATAGGTCTTGCCCAGGCCGCTGGCGGCAAGCACCACTTCATTGGCCAATGCAGGCATGGCCGATTCTCCTGGCAGC < NC_002947/2801807‑2801662 TCATCACCAAGAAGCCCTGATGCTGCCAGGAGAATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTTCTCGCCGGTCAGGGCCAGCACTTCGCCCGCGCGCAGGCTCA > 2:160381/1‑150 CTGCCAGGAGAATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTTCTCGCCGGTCAGGGCCAGCACTTCGCCCGCGCGCAGGCTCAGGCTGACCTCGCCGAGTACGGG < 1:160381/150‑1 TTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTTCTCGCCGGTCAGGGCCAGCACTTCGCCCGCGCGCAGGCTCAGGCTGACCTCGCCGAGTACGGGCTGGGCA < 1:909836/130‑1 TTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTTCTCGCCGGTCAGGGCCAGCACTTCGCCCGCGCGCAGGCTCAGGCTGACCTCGCCGAGTACGGGCTGGGCA > 2:909836/1‑130 CCGTTCCCGCCGGTCAGGGCCAGCACTTCGCCCGCGCGCAGGCTCAGGCTGACCTCGCCGAGTACGGGCTGGGCATAGGTCTTGCACAGGCCGCTGGCGGCAAGCACCACTTCATTGGCCAATGCAGGCATGGCCGATTCTCCTGGCAGC < 2:995696/150‑1 TCATCACCAAGAAGCCCTGATGCTGCCAGGAGAATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2801641‑2801748 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgtTCTCGCCGGTCAGGGCCAGCACTTCGCCCGCGCGCAGGCTCAGGCTGACCTCGCCGAGTACGGGCTGGGCATAGGTCTTGCCCAGGCCGCTGGCGGCAAGCACCACTTCATTGGCCAATGCAGGCATGGCCGATTCTCCTGGCAGC < NC_002947/2801807‑2801662 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |