New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2801748	57 (1.160)	4 (0.080)	4/242	NT	7.1%	coding (89/1575 nt)	rbsA‑I	ribose ABC transporter ‑ ATP‑binding subunit
	?	NC_002947	= 2801807	50 (1.050)					coding (148/1575 nt)	rbsA‑I	ribose ABC transporter ‑ ATP‑binding subunit

GCTGCCAGGAGAATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAGGCCTACGCGCCCGGCAGCCGCGGCGAGGCCGAACGCCTTGGGGTGCGCATGGTCATGCAGGAGC  >  NC_002947/2801662‑2801954                                                                                                                                                  |                                                                                                                                                    gctgcCAGGAGAATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGTGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGGGAacgg                                                                                                                                                 <  2:995696‑M2/150‑5 (MQ=255)         gagaATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCa                                                                                                                                         >  2:796627/1‑150 (MQ=255)            aaTCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAaga                                                                                                                                      <  2:431551/150‑1 (MQ=255)            aaTCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAaga                                                                                                                                      >  1:431551/1‑150 (MQ=255)              tCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGt                                                                                                                                    >  1:290449/1‑150 (MQ=255)              tCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGt                                                                                                                                    <  1:3564/150‑1 (MQ=255)                      gCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTc                                                                                                                            >  1:1084827/1‑150 (MQ=255)                       ccTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTcc                                                                                                                           >  2:950959/1‑150 (MQ=255)                         tGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCaa                                                                                                                         <  1:30398/150‑1 (MQ=255)                           cATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGc                                                                                                                       <  2:92802/150‑1 (MQ=255)                               ggCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTAt                                                                                                                   <  1:427427/150‑1 (MQ=255)                                 ccAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTAAACTGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCa                                                                                                                 >  1:798835/1‑150 (MQ=255)                                  cAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAg                                                                                                                        <  1:1011214/142‑1 (MQ=255)                                  cAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAg                                                                                                                        >  2:1011214/1‑142 (MQ=255)                                   aaTGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAACATCTACTTGTCGAGGTCCGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGc                                                                                                               <  2:623138/150‑1 (MQ=255)                                          tggtgCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGt                                                                                                                                <  2:740501/126‑1 (MQ=255)                                          tggtgCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGt                                                                                                                                >  1:740501/1‑126 (MQ=255)                                            gtgCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAg                                                                                                      <  2:798835/150‑1 (MQ=255)                                            gtgCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGACCGTACTCGGCGAGGTCAGCCTGGGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAg                                                                                                      <  2:38547/150‑1 (MQ=255)                                                ttGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGc                                                                                                  >  1:545945/1‑150 (MQ=255)                                                      ccAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCccacca                                                                                            >  1:890781/1‑150 (MQ=255)                                                           ggCCTGGGCAAGACCTATGCCCAGCCCATACTCGACGAGGACAGCCTGAGCCTGCGCGCGGGCGAAGTGCCGGCGATCTGCCATTGTCAGAGCTCGGACGAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGt                                                                                       >  1:1254390/1‑150 (MQ=255)                                                             ccTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCagg                                                                                                                        >  1:433469/1‑113 (MQ=255)                                                             ccTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCagg                                                                                                                        <  2:433469/115‑3 (MQ=255)                                                             ccTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTAt                                                                                                                   >  1:836693/1‑120 (MQ=255)                                                             ccTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTAt                                                                                                                   <  2:836693/120‑1 (MQ=255)                                                                   cAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGTGCGCTATTTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGAc                                                                               <  2:495475/150‑1 (MQ=255)                                                                      gACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTa                                                                            >  2:824751/1‑150 (MQ=255)                                                                            tGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAacgggctgggcataggtcttgcccaggccgctggcggcaagcaccacttcattggccaa                                                                                          >  2:909836‑M2/1‑71 (MQ=255)                                                                            tGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAacgggctgggcataggtcttgcccaggccgctggcggcaagcaccacttcattggccaa                                                                                          <  1:909836‑M2/130‑60 (MQ=255)                                                                               ccAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCTGTCACATGACCTACCGCGGCCa                                                                   >  1:333845/1‑150 (MQ=255)                                                                               ccAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCa                                                                   >  2:1080847/1‑150 (MQ=255)                                                                                cAGCCCGTACTCGGCTAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAg                                                                  <  2:890781/150‑1 (MQ=255)                                                                                cAGCCCGTACTCGGCGCGGTCAGCATGAGCCTGCGGGGGGGCTAAGTGTTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAg                                                                  <  2:141013/150‑1 (MQ=255)                                                                                cAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAg                                                                                                                        <  1:714621/96‑1 (MQ=255)                                                                                cAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAg                                                                                                                        >  2:714621/1‑96 (MQ=255)                                                                                cAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAg                                                                  <  1:824751/150‑1 (MQ=255)                                                                                aaGCCCCTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAg                                                                  <  1:1083525/149‑1 (MQ=255)                                                                                   cccGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAacgggctgggcataggtcttgcccaggccgctggcggcaagcaccacttcattggccaatgcaggcatggccgattctcctggcag                                                               <  1:160381‑M2/150‑87 (MQ=255)                                                                                       tACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAGGCCTAcg                                                           >  1:549911/1‑150 (MQ=255)                                                                                          tCGACGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAGGCCTACgcgc                                                        >  1:377667/1‑150 (MQ=255)                                                                                             gCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCTGTCACATGACCTACCGCGGCCAGGCCTACGCGCCCg                                                     <  2:333845/150‑1 (MQ=255)                                                                                              cGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAGGCCTACGCGCCCgg                                                    <  1:1080847/150‑1 (MQ=255)                                                                                                     agcctgagcctgCGCGCGGGCGAAGTGCTGGAACTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAGGCCTACGCGCCCGGCAGCcgc                                             >  1:253123/1‑150 (MQ=255)                                                                                                         tgagcctgCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAacgggctgggcataggtcttgcccaggccgctggcggcaagcaccacttcattggccaatgcaggcatggccgattctcctggcagcatcagggcttcttggtgatga                                         >  2:160381‑M2/1‑42 (MQ=255)                                                                                                             cctgCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTCATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAGGCCTACGCGCCCGGCAGCCGCGGCGAGGc                                     <  1:995696/150‑1 (MQ=255)                                                                                                              ctgCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAGGCCTACGCGCCCGGCAGCCGCGGCGAGGcc                                    <  1:950959/150‑1 (MQ=255)                                                                                                                 cgcgcgGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAGGCCTACGGGCCCGGCAGCCTCGGCGAGGCCGaa                                 <  2:170758/150‑1 (MQ=255)                                                                                                                        gCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAGGCCTACGCGCCCGGCAGCCgcggc                                          <  2:551742/134‑1 (MQ=255)                                                                                                                        gCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAGGCCTACGCGCCCGGCAGCCgcggc                                          >  1:551742/1‑134 (MQ=255)                                                                                                                        gCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAGGCCTACGCGCCCGGCAGCCGCGGCGAGGCCGAAc                                <  2:838729/144‑1 (MQ=255)                                                                                                                        gCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAGGCCTACGCGCCCGGCAGCCGCGGCGAGGCCGAAc                                >  1:838729/1‑144 (MQ=255)                                                                                                                                 tGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCAGGAGGTGCCAACCACCGGTCACATGACCTACCGCGGCCAGGCCTACGCGCCCGGCAGCCGCGGCGAGGCCGAACGCCTTGGGGTGCGCa                 <  1:796627/150‑1 (MQ=255)                                                                                                                                     ccTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAGGCCTACGCGCCCGGCAGCCGCGGCGAGGCCGAACGCCTTGGGGTGCGCATGGt             >  2:1026054/1‑150 (MQ=255)                                                                                                                                      cTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAGGCCTACGCGCCCGGCAGCCGCGGCGAGGCCGAACGCCTTGGGGTGCGCATGGTc            <  2:545945/150‑1 (MQ=255)                                                                                                                                                agaACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAGGCCTACGCGCCCGGCAGCCGCGGCGAGGCCGAACGCCTTGGGGTGCGCATGGTCATGCAGGAGc  >  1:907117/1‑150 (MQ=255)                                                                                                                                                  |                                                                                                                                                    GCTGCCAGGAGAATCGGCCATGCCTGCATTGGCCAATGAAGTGGTGCTTGCCGCCAGCGGCCTGGGCAAGACCTATGCCCAGCCCGTACTCGGCGAGGTCAGCCTGAGCCTGCGCGCGGGCGAAGTGCTGGCCCTGACCGGCGAGAACGGCGCAGGCAAGAGTACGTTGTCCAAGCTTATCAGCGGCCTGGAGGTGCCCACCACCGGTCACATGACCTACCGCGGCCAGGCCTACGCGCCCGGCAGCCGCGGCGAGGCCGAACGCCTTGGGGTGCGCATGGTCATGCAGGAGC  >  NC_002947/2801662‑2801954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.