New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 344315150 (1.020)3 (0.060) 3/238 NT 5.8% coding (1867/3270 nt) PP_3062 tail length determination protein
?NC_002947 = 3443177 49 (1.050)coding (1893/3270 nt) PP_3062 tail length determination protein

TCGAAAGGGGCTGCCCAAGCCGATGATCCCGGCGCGGCCGCCAATGACACCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3443004‑3443151
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccCTGTCGCGCTGCGCGCCGTCGCTCCCGGCGCCGACTTCTGCGACTGCCCCTTGCAGGGCCGCTATTTGCAACGCTACTGCCGATCCCGCCTATTGCATCAGCGTTGACCACGAATACGCGCTGGGTGTCATTGGCGGCCGCGCCGG  <  NC_002947/3443177‑3443032
                                                                                                                                                                                                                                                                                                      
TCGAAAGGGGCTGCCCAAGCCGATGATCCCGGCGCGGCCGCCAATGACACCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCCT                                                                                                                                                  >  2:1197761/1‑150
                                CGCGGCCGCCAATGACACCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCCTGTCGCGCTGCGCGCCGTCGCTCCCGGCGCCGA                                                                                                                  <  1:1197761/150‑1
                                                  CCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCCTGTCGCGCTGCGCGCCGTCGCTCCCGGCGCCGACTTCT                                                                                                             >  1:1252492/1‑137
                                                  CCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCCTGTCGCGCTGCGCGCCGTCGCTCCCGGCGCCGACTTCT                                                                                                             <  2:1252492/137‑1
                                                                                                                                                CGCCCTGTCGCGCTGCGCGCCGTCGCTCCCGGCGCCGACTTCTGCGACTGCCCCTTGCAGGGCCGCTATTTGCAACGCTACTGCCGATCCCGCCTATTGCATCAGCGTTGACCACGAATACGCGCTGGGTGTCATTGGCGGCCGCGCCGG  <  1:337889/150‑1
                                                                                                                                                   CCTGTCGCGCTGCGCGCCGTCGCTCCCGGCGCCGACTTCTGCGACTGCCCCTTGCAGGGCCGCTATTTGCAACGCTACTGCCGATCCCGCCTATTGCATCAGCGTTGACCACGAATACGCGCTGGGTGTCATTGGCGGCCGCGCCG   <  1:843464/146‑1
                                                                                                                                                   CCTGTCGCGCTGCGCGCCGTCGCTCCCGGCGCCGACTTCTGCGACTGCCCCTTGCAGGGCCGCTATTTGCAACGCTACTGCCGATCCCGCCTATTGCATCAGCGTTGACCACGAATACGCGCTGGGTGTCATTGGCGGCCGCGCCG   >  2:843464/1‑146
                                                                                                                                                                                                                                                                                                      
TCGAAAGGGGCTGCCCAAGCCGATGATCCCGGCGCGGCCGCCAATGACACCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3443004‑3443151
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccCTGTCGCGCTGCGCGCCGTCGCTCCCGGCGCCGACTTCTGCGACTGCCCCTTGCAGGGCCGCTATTTGCAACGCTACTGCCGATCCCGCCTATTGCATCAGCGTTGACCACGAATACGCGCTGGGTGTCATTGGCGGCCGCGCCGG  <  NC_002947/3443177‑3443032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.