| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3443151 | 50 (1.020) | 3 (0.060) | 3/238 | NT | 5.8% | coding (1867/3270 nt) | PP_3062 | tail length determination protein |
| ? | NC_002947 | = 3443177 | 49 (1.050) | coding (1893/3270 nt) | PP_3062 | tail length determination protein | |||||
TCGAAAGGGGCTGCCCAAGCCGATGATCCCGGCGCGGCCGCCAATGACACCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3443004‑3443151‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccCTGTCGCGCTGCGCGCCGTCGCTCCCGGCGCCGACTTCTGCGACTGCCCCTTGCAGGGCCGCTATTTGCAACGCTACTGCCGATCCCGCCTATTGCATCAGCGTTGACCACGAATACGCGCTGGGTGTCATTGGCGGCCGCGCCGG < NC_002947/3443177‑3443032 TCGAAAGGGGCTGCCCAAGCCGATGATCCCGGCGCGGCCGCCAATGACACCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCCT > 2:1197761/1‑150 CGCGGCCGCCAATGACACCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCCTGTCGCGCTGCGCGCCGTCGCTCCCGGCGCCGA < 1:1197761/150‑1 CCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCCTGTCGCGCTGCGCGCCGTCGCTCCCGGCGCCGACTTCT > 1:1252492/1‑137 CCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCCTGTCGCGCTGCGCGCCGTCGCTCCCGGCGCCGACTTCT < 2:1252492/137‑1 CGCCCTGTCGCGCTGCGCGCCGTCGCTCCCGGCGCCGACTTCTGCGACTGCCCCTTGCAGGGCCGCTATTTGCAACGCTACTGCCGATCCCGCCTATTGCATCAGCGTTGACCACGAATACGCGCTGGGTGTCATTGGCGGCCGCGCCGG < 1:337889/150‑1 CCTGTCGCGCTGCGCGCCGTCGCTCCCGGCGCCGACTTCTGCGACTGCCCCTTGCAGGGCCGCTATTTGCAACGCTACTGCCGATCCCGCCTATTGCATCAGCGTTGACCACGAATACGCGCTGGGTGTCATTGGCGGCCGCGCCG < 1:843464/146‑1 CCTGTCGCGCTGCGCGCCGTCGCTCCCGGCGCCGACTTCTGCGACTGCCCCTTGCAGGGCCGCTATTTGCAACGCTACTGCCGATCCCGCCTATTGCATCAGCGTTGACCACGAATACGCGCTGGGTGTCATTGGCGGCCGCGCCG > 2:843464/1‑146 TCGAAAGGGGCTGCCCAAGCCGATGATCCCGGCGCGGCCGCCAATGACACCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3443004‑3443151‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccCTGTCGCGCTGCGCGCCGTCGCTCCCGGCGCCGACTTCTGCGACTGCCCCTTGCAGGGCCGCTATTTGCAACGCTACTGCCGATCCCGCCTATTGCATCAGCGTTGACCACGAATACGCGCTGGGTGTCATTGGCGGCCGCGCCGG < NC_002947/3443177‑3443032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |