New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3443151 | 50 (1.020) | 3 (0.060) | 3/238 | NT | 5.8% | coding (1867/3270 nt) | PP_3062 | tail length determination protein |
? | NC_002947 | = 3443177 | 49 (1.050) | coding (1893/3270 nt) | PP_3062 | tail length determination protein |
CCGGCGCGGCCGCCAATGACACCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCAGCGTTGTCGGCCCTGACCGCCGCCGATGATCTGGGCAAGGTGGCGCGCTCGGTGCGCGGTGTTT > NC_002947/3443032‑3443325 | ccGGCGCGGCCGCCAATGACACCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGggcg < 1:337889‑M2/150‑5 (MQ=255) cGGCGCGGCCGCCAATGACACCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGg > 2:843464‑M2/1‑145 (MQ=255) cGGCGCGGCCGCCAATGACACCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGg < 1:843464‑M2/146‑2 (MQ=255) ccAATGACACCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGc > 2:1139327/1‑150 (MQ=255) ccAATGACACCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGc < 1:120876/150‑1 (MQ=255) acCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCg > 2:958433/1‑150 (MQ=255) acCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGAGCGCCCCAGTGCGGCCTGCACCg > 1:575797/1‑150 (MQ=255) cccAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCgg < 2:31838/150‑1 (MQ=255) ccAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGc > 1:130487/1‑150 (MQ=255) cAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGcc < 2:1159464/140‑1 (MQ=255) cAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGcc > 1:1159464/1‑140 (MQ=255) cgTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGa < 1:107423/150‑1 (MQ=255) cgTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGa < 1:958433/150‑1 (MQ=255) gTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAg > 2:573901/1‑150 (MQ=255) gTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAg > 2:91805/1‑150 (MQ=255) tCAACGCTGATGCAATAGGCAGGATCGGCAGTAGGGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCTCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGc > 2:429427/1‑150 (MQ=255) aaCGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCg > 2:1091228/1‑150 (MQ=255) gCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGcc > 1:533630/1‑150 (MQ=255) aTGCAATAGGCGGGATCGGCAGTAGCGTTGCAAAGAGCGGCCCTGCAAGGGGCAGTGGCAGCAGTCGGCGCCGGGAGCGCAGGC‑AGTTGCGCGGACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACACGAGCCGGCCAAgg > 1:932132/1‑150 (MQ=255) aaTAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAgg > 1:219001/1‑146 (MQ=255) aaTAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAgg < 2:219001/146‑1 (MQ=255) aaTAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGc > 1:1215325/1‑150 (MQ=255) aaTAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCCGCAAGGGGCAGTGGCAGAAGTGGGCGCCGGGAGCGCCGGCGCGCAGCGC‑AACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGGTGAGGCACCCGAGCCGTCCAAGGCtcc > 2:750789/1‑148 (MQ=255) gggATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCt > 2:1192903/1‑150 (MQ=255) gATCGGCGGTAGCGGCTCAAAGACCGGCCCTGGAACGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTaa < 2:32898/150‑1 (MQ=255) gCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTc < 2:932132/150‑1 (MQ=255) gCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTc > 1:793878/1‑150 (MQ=255) cAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCg < 2:243024/150‑1 (MQ=255) aGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCTGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCAAGCGTGAGGACTGCCTCGCCCGTTGTCGCTGCCGAGCCGTGTAAGGCGACCGTGTCTAAGGTTCgg < 2:337889/150‑1 (MQ=255) gTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGa > 2:485697/1‑104 (MQ=255) gTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGa < 1:485697/104‑1 (MQ=255) ttGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGctgc < 1:573012/150‑1 (MQ=255) ttGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGctgc < 1:573901/150‑1 (MQ=255) ttGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGctgc > 1:307613/1‑150 (MQ=255) aaaTAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGCTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGctgcctgc > 2:202525/1‑150 (MQ=255) aaTAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCa < 2:388266/150‑1 (MQ=255) aTAGCGGCCCTGCAAGGGGAAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCAg > 2:75324/1‑150 (MQ=255) ggCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCAGCGTTg > 1:200507/1‑150 (MQ=255) gCCCTGCACGGGGGAGTCGGAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCAGCGTTGt > 2:955940/1‑150 (MQ=255) gCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCgg > 1:474345/1‑131 (MQ=255) gCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCgg < 2:474345/131‑1 (MQ=255) gCCCTGCAAGGGGAAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCAGCGTTGt < 1:75324/150‑1 (MQ=255) cccTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCAGCGTTGTc < 2:130487/150‑1 (MQ=255) cTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCAGCGTTGTCgg > 1:1025195/1‑150 (MQ=255) tGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCAGCGTTGTCGGc > 1:510424/1‑150 (MQ=255) tGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCAGCGTTGTCGGc > 2:677633/1‑150 (MQ=255) cAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCAGCGTTGTCGGccc < 2:307613/150‑1 (MQ=255) cAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCAGCGTTGTCGGCCCTGACCGCCGCCga < 1:1139327/150‑1 (MQ=255) aGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGggcgccgacttctgcgactgccccttgcagggccgctatttgcaacgctactgccgatcccgcctattgcatcagcgttgaccacgaatacgcgctgg > 1:1252492‑M2/1‑39 (MQ=255) aGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGggcgccgacttctgcgactgccccttgcagggccgctatttgcaacgctactgccgatcccgcctattgcatcagcgttgaccacgaatacgcgctgg < 2:1252492‑M2/137‑99 (MQ=255) gcgccGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCAGCGTTGTCGGCCCTGACCGCCGCCgatga > 1:836303/5‑150 (MQ=255) tCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGggcgccgacttctgcgactgccccttgcagggccgctatttgcaacgctactgccgatcccgcctattgcatcagcgttgaccacgaatacgcgctgggtgtcattggcggccgcg < 1:1197761‑M2/150‑117 (MQ=255) ggCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCAGCGTTGTCGGCCTTGACCGCCGCCGATGATCTgg < 2:533630/150‑1 (MQ=255) ggCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCAGCGTTGTCGGCCCTGACCGCCGCCGATGATCTgg < 2:836303/150‑1 (MQ=255) gcgc‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCAGCGTTGTCGGCCCTGACCGCCGCCGATGATCTGGGCAAGGTGGCGCGCTCGGTgtgc > 1:824374/1‑150 (MQ=255) aGggcgccgacttctgcgactgccccttgcagggccgctatttgcaacgctactgccgatcccgcctattgcatcagcgttgaccacgaatacgcgctgggtgtcattggcggccgcgccgggatcatcggcttgggcagcccctttcga > 2:1197761‑M2/1‑2 (MQ=255) | CCGGCGCGGCCGCCAATGACACCCAGCGCGTATTCGTGGTCAACGCTGATGCAATAGGCGGGATCGGCAGTAGCGTTGCAAATAGCGGCCCTGCAAGGGGCAGTCGCAGAAGTCGGCGCCGGGAGCGACGGCGCGCAGCGC‑GACAGGGCGCCCCAGTGCGGCCTGCACCGGCCGTTGAGGCACCCAAGCCGGCCAAGGCTGCCGTGGCTAAGGTTCGGCCGCTGCCTGCAGCGTTGTCGGCCCTGACCGCCGCCGATGATCTGGGCAAGGTGGCGCGCTCGGTGCGCGGTGTTT > NC_002947/3443032‑3443325 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |