| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4204746 = | 44 (0.900) | 3 (0.060) | 3/236 | NT | 6.8% | coding (3074/6624 nt) | PP_3691 | DNA helicase‑related protein |
| ? | NC_002947 | 4204786 = | 41 (0.890) | coding (3034/6624 nt) | PP_3691 | DNA helicase‑related protein | |||||
CATGGGTTGAACAACACCGAGCGCTCAACGTTAAGCTTTCGCCGCTCTGGTCTTCTCGCGTCATGGCCGATGCGAAGCAGGGTATCGAGTTGCTACAGCAACGTCGTACCACCTTCGGTGAGCTCAGCCCGGCCTGGCCGGAGAGTG‑TCACCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4204899‑4204746‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaccgaAGGTGGTACGACGTTGCTGTAGCAACTCGATACCCTGCTTCGCATCGGCCATGACGCGAGAAGACCAGAGCGGCGAAAGCTTAACGTTGAGCGCTCGGTGTTGTTCAACCCATGCACAGCCATCGCTCAGCCGTTGGGAAATGGAAC > NC_002947/4204786‑4204932 CATGGGTTGAACAACACCGAGCGCTCAACGTTAAGCTTTCGCCGCTCTGGTCTTCTCGCGTCATGGCCGATGCGAAGCAGGGTATCGAGTTGCTACAGCAACGTCGTACCACCTTCGGTGAGCTCAGCCCGGCCTGGCCGGAGAGTG‑TCA > 2:1027666/1‑150 ATGGGTTGAACAACACCGAGCGCTCAACGTTAAGCTTTCGCCGCTCTGATCTTCTCGCGTCATGGCCGATGCGAAGCAGGGTATCGAGTTGCTACAGCAACGTCGTACCACCTTCGGTGAGCTCAGCCCGGCCTGGCCGGAGAGTG‑TCAC > 2:584501/1‑150 TGGGTTGAACAACACCGAGCGCTCAACGTTAAGCTTTCGCCGCTCTGGTCTTCTCGCGTCATGGCCGATGCGAAGCAGGGTATCGAGTTGCTACAGCAACGTCGTACCACCTTCGGTGAGCTCAGCCCGGCCTGGCCGGAGAGTG‑TCACC > 2:480530/1‑150 AACACCGAGCGCTCAACGTTAAGCTTTCGCCGCTCTGGTCTTCTCGCGTCATGGCCGATGCGAAGCAGGGTATCGAGTTGCTACAGCAACGTCGTACCACCTTCGGTGAGCTCAGCCCGGCCTGGCCGGAGAGTG‑TCACCGA < 1:177734/142‑1 AACACCGAGCGCTCAACGTTAAGCTTTCGCCGCTCTGGTCTTCTCGCGTCATGGCCGATGCGAAGCAGGGTATCGAGTTGCTACAGCAACGTCGTACCACCTTCGGTGAGCTCAGCCCGGCCTGGCCGGAGAGTG‑TCACCGA > 2:177734/1‑142 CAACGTTAAGCTTTCGCCGCTCTGGTCTTCTCGCGTCATGGCCGATGCGAAGCAGGGTATCGAGTTGCTACAGCAACGTCGTACCACCTTCGGTGA‑CACTCTCCGGCCAGGCCGGGCTGAGCTCACCGAAGGTGGTACGACGTTGCTGTA < 2:658986/150‑1 TACCACCTTCGGTGAGCTCAGCCCGGCCTGGCCGGAGAGTG‑TCACCGAAGGTGGTACGACGTTGCTGTAGCAACTCGATACCCTGCTTCGCATCGGCCATGACGCGAGAAGACCAGAGCGGCGAAAGCTTAACGTTGAGC > 1:121785/1‑140 TACCACCTTCGGTGAGCTCAGCCCGGCCTGGCCGGAGAGTG‑TCACCGAAGGTGGTACGACGTTGCTGTAGCAACTCGATACCCTGCTTCGCATCGGCCATGACGCGAGAAGACCAGAGCGGCGAAAGCTTAACGTTGAGC < 2:121785/140‑1 TCACCGAAGGTGGTACGACGTTGCTGTAGCAACTCGATACCCTGCTTCGCATCGGCCATGACGCGAGAAGACCAGAGCGGCGAAAGCTTAACGTTGAGCGCTCGGTGTTGTTCAACCCATGCACAGCCATCGCTCAGCCGTTGGGAAAT < 1:1193557/149‑1 TCACCGAAGGTGGTACGACGTTGCTGTAGCAACTCGATACCCTGCTTCGCATCGGCCATGACGCGAGAAGACCAGAGCGGCGAAAGCTTAACGTTGAGCGCTCGGTGTTGTTCAACCCATGCACAGCCATCGCTCAGCCGTTGGGAAAT > 2:1193557/1‑149 CGAAGGTGGTACGACGTTGCTGTAGCAACTCGATACCCTGCTTCGCATCGGCCATGACGCGAGAAGACCAGAGCGGCGAAAGCTTAACGTTGAGCGCTCGGTGTTGTTCAACCCATGCACAGCCATCGCTCAGCCGTTGGGAAATGGAAC > 2:580230/1‑150 CATGGGTTGAACAACACCGAGCGCTCAACGTTAAGCTTTCGCCGCTCTGGTCTTCTCGCGTCATGGCCGATGCGAAGCAGGGTATCGAGTTGCTACAGCAACGTCGTACCACCTTCGGTGAGCTCAGCCCGGCCTGGCCGGAGAGTG‑TCACCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4204899‑4204746‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaccgaAGGTGGTACGACGTTGCTGTAGCAACTCGATACCCTGCTTCGCATCGGCCATGACGCGAGAAGACCAGAGCGGCGAAAGCTTAACGTTGAGCGCTCGGTGTTGTTCAACCCATGCACAGCCATCGCTCAGCCGTTGGGAAATGGAAC > NC_002947/4204786‑4204932 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |