| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4847120 | 50 (1.020) | 4 (0.090) | 4/230 | NT | 7.8% | coding (1825/2475 nt) | PP_4261 | cation‑transporting P‑type ATPase |
| ? | NC_002947 | = 4847142 | 49 (1.090) | coding (1847/2475 nt) | PP_4261 | cation‑transporting P‑type ATPase | |||||
GTACCGCCACACCTGCCGATGACGTACAGAGCGTACCCGGCCTGGGCCTGGAGGGGGTGGTCGACGGCCAGCGCCTGCGCATTGGTCAGGCTACCTTCGTCTGCGCCTTGAGTGGTGCGGAAATCCCCGCTGTACCCGAGCCGCGCGGCCAGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4846965‑4847120‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagtggcCCCTGGCGGTCGCCCAGCAGCAGCCACTGGCCGCGCGGCTCGGGTACAGCGGGGATTTCCGCACCACTCAAGGCGCAGACGAAGGTAGCCTGACCAATGCGCAGGCGCTGGCCGTCGACCACCCCCTCCAGGCCCAGGCCGGG < NC_002947/4847142‑4847000 GTACCGCCACACCTGCCGATGACGTACAGAGCGTACCCGGCCTGGGCCTGGAGGGGGTGGTCGACGGCCAGCGCCTGCGCATTGGTCAGGCTACCTTCGTCTGCGCCTTGAGTGGTGCGGAAATCCCCGCTGTACCCGAGCCGCGCGGCC > 2:762471/1‑150 GCCACACCTGCCGATGACGTACAGAGCGTACCCGGCCTGGGCCTGGAGGGGGTGGTCGACGGCCAGCGCCTGCGCATTGGTCAGGCTACCTTCGTCTGCGCCTTGAGTGGTGCGGAAATCCCCGCTGTACCCGAGCCGCGCGGCCAGTGG < 1:918933/150‑1 CCACACCTGCCGATGACGTACAGAGCGTACCCGGCCTGGGCCTGGAGGGGGTGGTCGACGGCCAGCGCCTGCGCATTGGTCAGGCTACCTTCGTCTGCGCCTTGAGTGGTGCGGAAATCCCCGCTGTACCCGAGCCGCGCGGCCAGTGGC > 1:767138/1‑150 GTACAGAGCGTACCCGGCCTGGGCCTGGAGGGGGTGGTCGACGGCCAGCGCCTGCGCATTGGTCAGGCTACCTTCGTCTGCGCCTTGAGTGGTGCGGAAATCCCCGCTGTACCCGAGCCGCGCGGCCAGTGGCCCCTGGCGGTCGCCCAG > 1:1220427/1‑150 GGCCTGGGCCTGGAGGGGGTGGTCGACGGCCAGCGCCTGCGCATTGGTCAGGCTACCTTCGTCTGCGCCTTGAGTGGTGCGGAAATCCCCGCTGTACCCGAGCCGCGCGGCCAGTGGCCCCTGGCGGTCGCCCAGCAGCAGCCACTGGCC < 2:1220427/150‑1 GTCAGGCTACCTTCGTCTGCGCCTTGAGTGGTGCGGAAATCCCCGCTGTACCCGAGCCGCGCGGCCAGTGGCCCCTGGCGGTCGCCCAGCAGCAGCCACTGGCCGCGCGGCTCGG < 1:789851/115‑1 GTCAGGCTACCTTCGTCTGCGCCTTGAGTGGTGCGGAAATCCCCGCTGTACCCGAGCCGCGCGGCCAGTGGCCCCTGGCGGTCGCCCAGCAGCAGCCACTGGCCGCGCGGCTCGG > 2:789851/1‑115 GGCCAGTGGCCCCTGGCGGTCGCCCAGCAGCAGCCACTGACCGCGCGGCTCGGGTACAGCGGGGATTTCCGCACGACTCAAGGCGCAGACGACGGTAGCCTGACCAATGCGCAGGCGCTGGCCGGCGACCACCCCCTCCAGGCCCAGGCt > 2:545062/1‑149 CAGTGGCCCCTGGCGGTCGCCCAGCAGCAGCCACTGGCCGCGCGGCTCGGGTACAGCGGGGATTTCCGCACCACTCAAGGCGCAGACGAAGGTAGCCTGACCAATGCGCAGGCGCTGGCCGTCGACCACCCCCTCCAGGCCCAGGCCGGG > 2:51312/1‑150 CAGTGGCCCCTGGCGGTCGCCCAGCAGCAGCCACTGGCCGCGCGGCTCGGGTACAGCGGGGATTTCCGCACCACTCAAGGCGCAGACGAAGGTAGCCTGACCAATGCGCAGGCGCTGG < 1:706638/118‑1 CAGTGGCCCCTGGCGGTCGCCCAGCAGCAGCCACTGGCCGCGCGGCTCGGGTACAGCGGGGATTTCCGCACCACTCAAGGCGCAGACGAAGGTAGCCTGACCAATGCGCAGGCGCTGG > 2:706638/1‑118 GTACCGCCACACCTGCCGATGACGTACAGAGCGTACCCGGCCTGGGCCTGGAGGGGGTGGTCGACGGCCAGCGCCTGCGCATTGGTCAGGCTACCTTCGTCTGCGCCTTGAGTGGTGCGGAAATCCCCGCTGTACCCGAGCCGCGCGGCCAGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4846965‑4847120‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagtggcCCCTGGCGGTCGCCCAGCAGCAGCCACTGGCCGCGCGGCTCGGGTACAGCGGGGATTTCCGCACCACTCAAGGCGCAGACGAAGGTAGCCTGACCAATGCGCAGGCGCTGGCCGTCGACCACCCCCTCCAGGCCCAGGCCGGG < NC_002947/4847142‑4847000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |