New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 488990248 (0.980)4 (0.080) 4/240 NT 8.1% coding (151/894 nt) glxR 2‑hydroxy‑3‑oxopropionate reductase
?NC_002947 = 4889909 45 (0.960)coding (158/894 nt) glxR 2‑hydroxy‑3‑oxopropionate reductase

TCATGGCTAAAATCGGTTTCATCGGCACCGGCATCATGGGCAAGCCCATGGCTCAGAACCTGCAAAAGGCAGGTCACAGCCTGTTCATTTCCACCCACCACGACGCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4889750‑4889902
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaccTCTTTCGGGTTGGCCAGGGCCACGGCACCGGCAGCGATCAGGTCGGCTGGCGCGGCGTCGTGGTGGGTGGAAATGAACAGGCTGTGACCTGCCTTTTGCAGGTTCTGAGCCATGGGCTTGCCCATGATGCCGGTGCCGATGAAACCGAT  <  NC_002947/4889909‑4889761
                                                                                                                                                                                                                                                                                                              
TCATGGCTAAAATCGGTTTCATCGGCACCGGCATCATGGGCAAGCCCATGGCTCAGAACCTGCAAAAGGCAGGTCACAGACCGTTCATTTCCACCCACCACGACGCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCA                                                                                                                                                          >  1:404577/1‑150
 CATGGCTAAAATCGGTTTCATCGGCACCGGCATCATGGGCAAGCCCATGGCTCAGAACCTGCAAAAGGCAGGTCACAGCCTGTTCATTTCCACCCACCACGACGCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCAA                                                                                                                                                         <  2:839166/150‑1
  ATGGCTAAAATCGGTTTCATCGGCACCGGCATCATGGGCAAGCCCATGGCTCAGAACCTGCAAAAGGCAGGTCACAGCCTGTTCATTTCCACCCACCACGACGCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCAAC                                                                                                                                                        <  1:835777/150‑1
                                                                                    TCATTTCCACCCACCACGACGCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCAACCTCTTTCGGGTTGGCCAGGGCCACG                                                                                                                               <  1:13376/93‑1
                                                                                    TCATTTCCACCCACCACGACGCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCAACCTCTTTCGGGTTGGCCAGGGCCACG                                                                                                                               >  2:13376/1‑93
                                                                                                        GCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCAACCTCTTTCGGGTTGGCCA                                                                                                                                       >  1:58460/1‑65
                                                                                                        GCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCAACCTCTTTCGGGTTGGCCA                                                                                                                                       <  2:58460/65‑1
                                                                                                                                                        CTCTTTCGGGTTGGCCAGGGCCACGGCACCGGCAGCGATCAGGTCGGCTGGCGCGGCGTCGTGGTGGGTGGAAATGAACAGGCTGTGACCTGCCTTTTGCAGGTTCTGAGCCATGGGCTTGCCCATGATGCCGGTGCCGATGAAAACGAT  >  1:535763/1‑150
                                                                                                                                                        CTCTTTCGGGTTGGCCAGGGCCACGGCACCGGCAGCGATCAGGTCGGCTGGCGCGGCGTCGTGGTGGGTGGAAATGAACAGGCTGTGACCTGCCTTTTGCAGGTTCTGAGCCATGGGCTTGCCCATGATGCCGGTGCCGA            >  1:1241917/1‑140
                                                                                                                                                        CTCTTTCGGGTTGGCCAGGGCCACGGCACCGGCAGCGATCAGGTCGGCTGGCGCGGCGTCGTGGTGGGTGGAAATGAACAGGCTGTGACCTGCCTTTTGCAGGTTCTGAGCCATGGGCTTGCCCATGATGCCGGTGCCGA            <  2:1241917/140‑1
                                                                                                                                                                                                                                                                                                              
TCATGGCTAAAATCGGTTTCATCGGCACCGGCATCATGGGCAAGCCCATGGCTCAGAACCTGCAAAAGGCAGGTCACAGCCTGTTCATTTCCACCCACCACGACGCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4889750‑4889902
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaccTCTTTCGGGTTGGCCAGGGCCACGGCACCGGCAGCGATCAGGTCGGCTGGCGCGGCGTCGTGGTGGGTGGAAATGAACAGGCTGTGACCTGCCTTTTGCAGGTTCTGAGCCATGGGCTTGCCCATGATGCCGGTGCCGATGAAACCGAT  <  NC_002947/4889909‑4889761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.