New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4889902 | 48 (0.980) | 4 (0.080) | 4/240 | NT | 8.1% | coding (151/894 nt) | glxR | 2‑hydroxy‑3‑oxopropionate reductase |
? | NC_002947 | = 4889909 | 45 (0.960) | coding (158/894 nt) | glxR | 2‑hydroxy‑3‑oxopropionate reductase |
TCATGGCTAAAATCGGTTTCATCGGCACCGGCATCATGGGCAAGCCCATGGCTCAGAACCTGCAAAAGGCAGGTCACAGCCTGTTCATTTCCACCCACCACGACGCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4889750‑4889902 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaccTCTTTCGGGTTGGCCAGGGCCACGGCACCGGCAGCGATCAGGTCGGCTGGCGCGGCGTCGTGGTGGGTGGAAATGAACAGGCTGTGACCTGCCTTTTGCAGGTTCTGAGCCATGGGCTTGCCCATGATGCCGGTGCCGATGAAACCGAT < NC_002947/4889909‑4889761 TCATGGCTAAAATCGGTTTCATCGGCACCGGCATCATGGGCAAGCCCATGGCTCAGAACCTGCAAAAGGCAGGTCACAGACCGTTCATTTCCACCCACCACGACGCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCA > 1:404577/1‑150 CATGGCTAAAATCGGTTTCATCGGCACCGGCATCATGGGCAAGCCCATGGCTCAGAACCTGCAAAAGGCAGGTCACAGCCTGTTCATTTCCACCCACCACGACGCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCAA < 2:839166/150‑1 ATGGCTAAAATCGGTTTCATCGGCACCGGCATCATGGGCAAGCCCATGGCTCAGAACCTGCAAAAGGCAGGTCACAGCCTGTTCATTTCCACCCACCACGACGCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCAAC < 1:835777/150‑1 TCATTTCCACCCACCACGACGCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCAACCTCTTTCGGGTTGGCCAGGGCCACG < 1:13376/93‑1 TCATTTCCACCCACCACGACGCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCAACCTCTTTCGGGTTGGCCAGGGCCACG > 2:13376/1‑93 GCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCAACCTCTTTCGGGTTGGCCA > 1:58460/1‑65 GCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCAACCTCTTTCGGGTTGGCCA < 2:58460/65‑1 CTCTTTCGGGTTGGCCAGGGCCACGGCACCGGCAGCGATCAGGTCGGCTGGCGCGGCGTCGTGGTGGGTGGAAATGAACAGGCTGTGACCTGCCTTTTGCAGGTTCTGAGCCATGGGCTTGCCCATGATGCCGGTGCCGATGAAAACGAT > 1:535763/1‑150 CTCTTTCGGGTTGGCCAGGGCCACGGCACCGGCAGCGATCAGGTCGGCTGGCGCGGCGTCGTGGTGGGTGGAAATGAACAGGCTGTGACCTGCCTTTTGCAGGTTCTGAGCCATGGGCTTGCCCATGATGCCGGTGCCGA > 1:1241917/1‑140 CTCTTTCGGGTTGGCCAGGGCCACGGCACCGGCAGCGATCAGGTCGGCTGGCGCGGCGTCGTGGTGGGTGGAAATGAACAGGCTGTGACCTGCCTTTTGCAGGTTCTGAGCCATGGGCTTGCCCATGATGCCGGTGCCGA < 2:1241917/140‑1 TCATGGCTAAAATCGGTTTCATCGGCACCGGCATCATGGGCAAGCCCATGGCTCAGAACCTGCAAAAGGCAGGTCACAGCCTGTTCATTTCCACCCACCACGACGCCGCGCCAGCCGACCTGATCGCTGCCGGTGCCGTGGCCCTGGCCAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4889750‑4889902 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaccTCTTTCGGGTTGGCCAGGGCCACGGCACCGGCAGCGATCAGGTCGGCTGGCGCGGCGTCGTGGTGGGTGGAAATGAACAGGCTGTGACCTGCCTTTTGCAGGTTCTGAGCCATGGGCTTGCCCATGATGCCGGTGCCGATGAAACCGAT < NC_002947/4889909‑4889761 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |