New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5106327	46 (0.940)	3 (0.060)	3/240	NT	6.1%	coding (1833/3021 nt)	ydiJ	putative oxidoreductase
	?	NC_002947	= 5106375	48 (1.020)					coding (1785/3021 nt)	ydiJ	putative oxidoreductase

CATAGCGTCGTACACTTCATGGGAGAAGTCTTCCTGGCCCTGGTTGCGCGCACGGTTGTTGCGCAGACGCGCCGGCAGGCCCTTGAGCCACGACACCTTGTTGCGCGCCGCAGCCAGCACATCGATGTTCGCCTCGCCCTGCAGGCGCAGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5106174‑5106327 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacCCGCGAACGCCAGCATTCGCCCAAGGGGCGCGCCTCGCTGATGCGCGAGTGGCTGCGCCTGCAGGGCGAGGCGAACATCGATGTGCTGGCTGCGGCGCGCAACAAGGTGTCGTGGCTCAAGGGCCTGCCGGCGCGTCTGCGCAACAACC  <  NC_002947/5106375‑5106227                                                                                                                                                                                                                                                                                                                 CATAGCGTCGTACACTTCATGGGAGAAGTCTTCCTGGCCCTGGTTGCGCGCACGGTTGTTGCGCAGACGCGCCGGCAGGCCCTTGAGCCACGACACCTTGTTGCGCGCCGCAGCCAGCACATCGATGTTCGCCTCGCCCTGCAGGCGCAG                                                                                                                                                           >  2:1088071/1‑150   TAGCGTCGTACACTTCATGGGAGAAGTCTTCCTGGCCCTGGTTGCGCGCACGGTTGTTGCGCAGACGCGCCGGCAGGCCCTTGAGCCACGACACCTTGTTGCGCGCCGCAGCCAGCACATCGATGTTCGCCTCGCCCTGCAGGCGCAGCC                                                                                                                                                         >  2:746011/1‑150                                                       GTTGTTGCGCAGACGCGCCGGCAGGCCCTTGAGCCACGACACCTTGTTGCGCGCCGCAGCCAGCACATCGATGTTCGCCTCGCCCTGCAGGCGCAGCCACCCGCGAACGCCAGCATTCGCCCAAGGGGCGCGCCTCGCTGATGCGCGAGT                                                                                                     <  1:785832/150‑1                                                                                          ACGACACCTTGTTGCGCGCCGCAGCCAGCACATCGATGTTCGCCTCGCCCTGCAGGCGCAGC                                                                                                                                                          >  1:693128/1‑62                                                                                          ACGACACCTTGTTGCGCGCCGCAGCCAGCACATCGATGTTCGCCTCGCCCTGCAGGCGCAGC                                                                                                                                                          <  2:693128/62‑1                                                                                           CGACACCTTGTTGCGCGCCGCAGCCAGCACATCGATGTTCGCCTCGCCCTGCAGGCGCAGCCACCCGCGAACGCCAGCATTCGCCCAAGGGGCGCGCCTCGCTGATGCGCGAGTGGCTGCGC                                                                                             <  1:816592/122‑1                                                                                           CGACACCTTGTTGCGCGCCGCAGCCAGCACATCGATGTTCGCCTCGCCCTGCAGGCGCAGCCACCCGCGAACGCCAGCATTCGCCCAAGGGGCGCGCCTCGCTGATGCGCGAGTGGCTGCGC                                                                                             >  2:816592/1‑122                                                                                                                                                          CCCGCGAACGCCAGCATTCGCCCAAGGGGCGCGCCTCGCTGATGCGCGAGTGGCTGCGCCTGCAGGGCGAGGCGAACATCGATGTGCTGGCTGCGGCGCGCAACAAGGTGTCGTGGCTCAAGGGCCTGCCGGCGCGTCTGCGCAACAACC  >  2:1080063/1‑150                                                                                                                                                                                                                                                                                                                 CATAGCGTCGTACACTTCATGGGAGAAGTCTTCCTGGCCCTGGTTGCGCGCACGGTTGTTGCGCAGACGCGCCGGCAGGCCCTTGAGCCACGACACCTTGTTGCGCGCCGCAGCCAGCACATCGATGTTCGCCTCGCCCTGCAGGCGCAGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5106174‑5106327 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacCCGCGAACGCCAGCATTCGCCCAAGGGGCGCGCCTCGCTGATGCGCGAGTGGCTGCGCCTGCAGGGCGAGGCGAACATCGATGTGCTGGCTGCGGCGCGCAACAAGGTGTCGTGGCTCAAGGGCCTGCCGGCGCGTCTGCGCAACAACC  <  NC_002947/5106375‑5106227

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.