New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2309220 =	39 (0.800)	4 (0.090)	4/238	NT	10.2%	coding (845/960 nt)	PP_2032	ATPase
	?	NC_002947	2309267 =	33 (0.710)					coding (798/960 nt)	PP_2032	ATPase

GCCGTGTTCGGCCAGCTGCGCAGTGGGCATGGGTTCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTG  >  NC_002947/2309071‑2309369                                                                                                                                                      |                                                                                                                                                      acatggccgacgcagtggaggaatacctggtgcagctggtcatggccacccgcaccccggccaagttcgacaccgagctggccgactggatcgcctacggcgccagcccgcgtggctccatctcgctggaccgctgcgcgcgtgcccatg                                                                                                                                                       <  2:1202050‑M1/1‑1 (MQ=255)  ccGTGTTCGGCCAGCTGCGCAGTGGGCATGGGTTCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCTGCCTCGGCCTCGCACGAGCAGATGCTCCATTGTCGTATTACGTTTAACAGCACGGc                                                                                                                                                      <  2:919843/150‑1 (MQ=255)      gccgacgcagtggaggaatacctggtgcagctggtcatggccacccgcaccccggccaagttcgacaccgagctggccgactggatcgcctacggcgccagcccgcgtggctccatctcgctggaccgctgcgcgcgtgcccatGCCTgg                                                                                                                                                  <  1:232464‑M1/6‑1 (MQ=255)       ttCGGCCAGCTGCGCAGTGGGCATGGGTTCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGCGGGCGCAGTACGTCGAACAGCACGGCCTGGa                                                                                                                                                 <  2:373000/150‑1 (MQ=255)       ttCGGCCAGCTGCGCAGTGGGCATGGGTTCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCACGCGGTCCCGGCCAATCCCTGCCGCCTCGTCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGa                                                                                                                                                 <  1:797775/150‑1 (MQ=255)               gCTGCGCAGTGGGCATGGGTTCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCg                                                                                                                                         <  2:392603/150‑1 (MQ=255)                cTGCGCAGTGGGCATGGGTTCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCgg                                                                                                                                        <  2:443040/150‑1 (MQ=255)                cTGCGCAGTGGGCATGGGTTCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCgg                                                                                                                                        <  2:512460/150‑1 (MQ=255)                   aggaatacctggtgcagctggtcatggccacccgcaccccggccaagttcgacaccgagctggccgactggatcgcctacggcgccagcccgcgtggctccatctcgctggaccgctgcgcgcgtgcccatGCCt                                                                                                                                                    >  1:664156‑M1/132‑135 (MQ=255)                   aggaatacctggtgcagctggtcatggccacccgcaccccggccaagttcgacaccgagctggccgactggatcgcctacggcgccagcccgcgtggctccatctcgctggaccgctgcgcgcgtgcccatGCCt                                                                                                                                                    <  2:664156‑M1/4‑1 (MQ=255)                    gcAGTGGGCATGGGTGCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCt                                                                                                                                    >  1:44105/1‑150 (MQ=255)                        tGGGCATGGGTTCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACg                                                                                                                                >  2:252861/1‑150 (MQ=255)                           gCATGGGTTCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAg                                                                                                                             >  1:1116995/1‑150 (MQ=255)                            cATGGGTTCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGt                                                                                                                            >  1:362858/1‑150 (MQ=255)                             aTGGGTTCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTc                                                                                                                           >  2:956236/1‑150 (MQ=255)                             aTGGGTTCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTc                                                                                                                           <  2:627542/150‑1 (MQ=255)                                                 cgacgTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCAt                                                                                                       <  1:956236/150‑1 (MQ=255)                                                 cgacgTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTCACGAAGTCGCGCCCGGCCAGCCAGGCAt                                                                                                       <  2:518356/150‑1 (MQ=255)                                                       cGAGGTTGCTTTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCAc                                                                                                 <  2:612038/150‑1 (MQ=255)                                                                       cACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTc                                                                                                                           >  1:763591/1‑108 (MQ=255)                                                                       cACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTc                                                                                                                           <  2:763591/108‑1 (MQ=255)                                                                                cTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGa                                                                        >  2:489387/1‑150 (MQ=255)                                                                                         cccTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCgg                                                               >  1:976491/1‑150 (MQ=255)                                                                                         cccTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCACTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCgg                                                               <  2:927402/150‑1 (MQ=255)                                                                                           cTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGc                                                             >  2:382524/1‑150 (MQ=255)                                                                                             gcctacggcgccagcccgcgtggctccatctcgctggaccgctgcgcgcgtgcccatGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCAcgc                                                                                               <  2:322893‑M1/57‑1 (MQ=255)                                                                                             gcctacggcgccagcccgcgtggctccatctcgctggaccgctgcgcgcgtgcccatGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCAcgc                                                                                               >  1:322893‑M1/58‑114 (MQ=255)                                                                                                       cctcgAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAgg                                                 >  1:334651/1‑150 (MQ=255)                                                                                                        ctcgAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGc                                                >  1:672565/1‑150 (MQ=255)                                                                                                         tcgAACGAGAGGATGATGCGGTGGCGCAGTAGGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCg                                               >  1:999075/1‑150 (MQ=255)                                                                                                         tcgAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCg                                               >  1:53643/1‑150 (MQ=255)                                                                                                         tcgAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCg                                               >  1:502323/1‑150 (MQ=255)                                                                                                            ccgcgtggctccatctcgctggaccgctgcgcgcgtgcccatGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCa                                                                                                        >  2:90288‑M1/43‑90 (MQ=255)                                                                                                            ccgcgtggctccatctcgctggaccgctgcgcgcgtgcccatGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCa                                                                                                        <  1:90288‑M1/48‑1 (MQ=255)                                                                                                               gagaGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAg                                         >  2:399295/1‑150 (MQ=255)                                                                                                                    gatgatGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGc                                    <  1:382524/150‑1 (MQ=255)                                                                                                                        atgCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATc                                            >  1:1197640/1‑138 (MQ=255)                                                                                                                        atgCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATc                                            <  2:1197640/138‑1 (MQ=255)                                                                                                                             gTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGgt                           <  1:399295/150‑1 (MQ=255)                                                                                                                                gcgcAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGAc                                                                                                                                 >  2:621279/1‑45 (MQ=255)                                                                                                                                gcgcAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGAc                                                                                                                                 <  1:621279/45‑1 (MQ=255)                                                                                                                                      tACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCAc                                                                                                 >  2:326772/1‑71 (MQ=255)                                                                                                                                      tACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCAc                                                                                                 <  1:326772/71‑1 (MQ=255)                                                                                                                                         gTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGc               >  1:912172/1‑150 (MQ=255)                                                                                                                                         gTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGc               >  1:411722/1‑150 (MQ=255)                                                                                                                                         gTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGc               >  2:779437/1‑150 (MQ=255)                                                                                                                                         gTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGc               >  1:284967/1‑150 (MQ=255)                                                                                                                                            gAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCgg            >  1:1202050/1‑150 (MQ=255)                                                                                                                                                   aCGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCgg     >  2:232464/1‑150 (MQ=255)                                                                                                                                                   aCGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCgg     <  2:53643/150‑1 (MQ=255)                                                                                                                                                      GCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTg  >  2:999075‑M1/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                      GCCGTGTTCGGCCAGCTGCGCAGTGGGCATGGGTTCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTGGCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTG  >  NC_002947/2309071‑2309369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.