New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2309220 =	39 (0.800)	4 (0.090)	4/238	NT	10.2%	coding (845/960 nt)	PP_2032	ATPase
	?	NC_002947	2309267 =	33 (0.710)					coding (798/960 nt)	PP_2032	ATPase

CGACGTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTATTCCTCCACTGCGTCGGCCATGT  >  NC_002947/2309119‑2309415                                                                                                                                                     |                                                                                                                                                      cgacgTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCAt                                                                                                                                                      <  1:956236/150‑1 (MQ=255) cgacgTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTCACGAAGTCGCGCCCGGCCAGCCAGGCAt                                                                                                                                                      <  2:518356/150‑1 (MQ=255)       cGAGGTTGCTTTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCAc                                                                                                                                                <  2:612038/150‑1 (MQ=255)                                cTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGa                                                                                                                       >  2:489387/1‑150 (MQ=255)                                         cccTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCgg                                                                                                              >  1:976491/1‑150 (MQ=255)                                         cccTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCACTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCgg                                                                                                              <  2:927402/150‑1 (MQ=255)                                           cTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGc                                                                                                            >  2:382524/1‑150 (MQ=255)                                             gcctacggcgccagcccgcgtggctccatctcgctggaccgctgcgcgcgtgcccatGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCAcgc                                                                                                                                              <  2:322893‑M1/57‑1 (MQ=255)                                             gcctacggcgccagcccgcgtggctccatctcgctggaccgctgcgcgcgtgcccatGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCAcgc                                                                                                                                              >  1:322893‑M1/58‑114 (MQ=255)                                                       cctcgAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAgg                                                                                               >  1:334651/1‑150 (MQ=255)                                                        ctcgAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGc                                                                                              >  1:672565/1‑150 (MQ=255)                                                         tcgAACGAGAGGATGATGCGGTGGCGCAGTAGGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCg                                                                                             >  1:999075/1‑150 (MQ=255)                                                         tcgAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCg                                                                                             >  1:53643/1‑150 (MQ=255)                                                         tcgAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCg                                                                                             >  1:502323/1‑150 (MQ=255)                                                            ccgcgtggctccatctcgctggaccgctgcgcgcgtgcccatGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCa                                                                                                                                                       <  1:90288‑M1/48‑1 (MQ=255)                                                            ccgcgtggctccatctcgctggaccgctgcgcgcgtgcccatGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCa                                                                                                                                                       >  2:90288‑M1/43‑90 (MQ=255)                                                               gagaGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAg                                                                                       >  2:399295/1‑150 (MQ=255)                                                                    gatgatGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGc                                                                                  <  1:382524/150‑1 (MQ=255)                                                                        atgCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATc                                                                                          >  1:1197640/1‑138 (MQ=255)                                                                        atgCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATc                                                                                          <  2:1197640/138‑1 (MQ=255)                                                                             gTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGgt                                                                         <  1:399295/150‑1 (MQ=255)                                                                                      tACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCAc                                                                                                                                                >  2:326772/1‑71 (MQ=255)                                                                                      tACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCAc                                                                                                                                                <  1:326772/71‑1 (MQ=255)                                                                                         gTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGc                                                             >  1:284967/1‑150 (MQ=255)                                                                                         gTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGc                                                             >  2:779437/1‑150 (MQ=255)                                                                                         gTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGc                                                             >  1:411722/1‑150 (MQ=255)                                                                                         gTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGc                                                             >  1:912172/1‑150 (MQ=255)                                                                                            gcgtgcccatgcctggctggccgggcgcgacttcgtcagccccgaagacatccaggcATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGc                                                                                              >  1:322893‑M2/58‑114 (MQ=255)                                                                                            gcgtgcccatgcctggctggccgggcgcgacttcgtcagccccgaagacatccaggcATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGc                                                                                              <  2:322893‑M2/57‑1 (MQ=255)                                                                                            gAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCgg                                                          >  1:1202050/1‑150 (MQ=255)                                                                                                   aCGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCgg                                                   <  2:53643/150‑1 (MQ=255)                                                                                                   aCGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCgg                                                   >  2:232464/1‑150 (MQ=255)                                                                                                     tgcctggctggccgggcgcgacttcgtcagccccgaagacatccaggcATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCgg                                                                                                              >  2:90288‑M2/49‑90 (MQ=255)                                                                                                     tgcctggctggccgggcgcgacttcgtcagccccgaagacatccaggcATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCgg                                                                                                              <  1:90288‑M2/42‑1 (MQ=255)                                                                                                      GCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTg                                                >  2:999075‑M1/1‑150 (MQ=255)                                                                                                        CTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACtt                                                                <  1:1247791‑M1/132‑1 (MQ=255)                                                                                                        CTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACtt                                                                >  2:1247791‑M1/1‑132 (MQ=255)                                                                                                        CTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGc                                              <  2:248465‑M1/150‑1 (MQ=255)                                                                                                         TGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGcc                                             >  1:202057‑M1/1‑150 (MQ=255)                                                                                                          GGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCa                                            >  2:1116995‑M1/1‑150 (MQ=255)                                                                                                             tGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGa                                         <  2:912172/150‑1 (MQ=255)                                                                                                              gTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGCTCGAGGC‑TGGGGGTTGTTCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCTGGGGTGCGGGTGGCCATGAc                                        <  2:44105/150‑1 (MQ=255)                                                                                                                          gACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGATG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAg                            <  2:944119/150‑1 (MQ=255)                                                                                                                           aCGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGGCATGACCAGCTGCACCAgg                           >  1:504533/1‑150 (MQ=255)                                                                                                                           aCGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAgg                           >  1:224696/1‑150 (MQ=255)                                                                                                                             gAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGGGGCCATGACCAGATGCACCAggaa                         >  2:210744/1‑148 (MQ=255)                                                                                                                             gAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGAGTCGAACGTCGCCGTTGTGGCGGTGGTCATTACGAGCAGCAACAgatc                         >  2:210679/1‑147 (MQ=255)                                                                                                                              aaGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTAt                        <  1:252861/150‑1 (MQ=255)                                                                                                                                    cacccGGCCAGCCAGGCAGGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCTGGCTG‑GCGCCGTATGCGACCCAGTGGGCCAGCTCGGTGTCGAACTTGGCCCGGGTGCGGGTGGCGATGACCAGCTGCACCAGGTATtcctcc                  <  2:515724/148‑1 (MQ=255)                                                                                                                                              gccagGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGa                                         >  1:904266/1‑117 (MQ=255)                                                                                                                                              gccagGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGa                                         <  2:904266/117‑1 (MQ=255)                                                                                                                                               ccaggcATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTATTCCTCCACTGCGTCGGc       <  1:232464‑M2/144‑1 (MQ=255)                                                                                                                                                 aggcATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTATtcct                    >  1:664156‑M2/5‑135 (MQ=255)                                                                                                                                                 aggcATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTATtcct                    <  2:664156‑M2/131‑1 (MQ=255)                                                                                                                                                    cATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTATTCCTCCACTGCGTCGGCCATGt  <  2:1202050‑M2/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      CGACGTCGAGGATGCGCTGGACCACGCGGTCCTGGTCGATCCCTGCCGCCTCGGCCTCGAACGAGAGGATGATGCGGTGGCGCAGTACGTCGAACAGCACGGCCTGGATGTCTTCGGGGCTGACGAAGTCGCGCCCGGCCAGCCAGGCATGGGCACGCGCGCAGCGGTCCAGCGAGATGGAGCCACGCGGGCTG‑GCGCCGTAGGCGATCCAGTCGGCCAGCTCGGTGTCGAACTTGGCCGGGGTGCGGGTGGCCATGACCAGCTGCACCAGGTATTCCTCCACTGCGTCGGCCATGT  >  NC_002947/2309119‑2309415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.