New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3991356	45 (0.920)	4 (0.080)	4/240	NT	8.1%	coding (315/894 nt)	PP_3517	hypothetical protein
	?	NC_002947	= 3991373	47 (1.000)					coding (298/894 nt)	PP_3517	hypothetical protein

GCGTAGTCCATTTGCGCATCGTGATAGGCCAACAGCGACTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCC  >  NC_002947/3991210‑3991505                                                                                                                                                   |                                                                                                                                                       gcgTAGTCCATTTGCGCATCGTGATAGGCCAACAGCGACTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑g                                                                                                                                                    >  1:806693/1‑150 (MQ=255)  cgTAGTCCATTTGCGCATCGTGATAGGCCAACAGCGACTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑gg                                                                                                                                                   >  1:301392/1‑150 (MQ=255)    tAGTCCATTTGCGCATCGTGATAGGCCAACAGCGACTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTc                                                                                                                                                 <  2:243430/150‑1 (MQ=255)    tAGTCCATTTGCGCATCGTGATAGGCCAACAGCGACTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTc                                                                                                                                                 <  2:301392/150‑1 (MQ=255)    tAGTCCATTTGCGCATCGTGATAGGCCAACAGCGACTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGAGCGCGAAGTTCGGCACTGCCCGACCCGAAGTCGAACCGCCATCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGtg                                                                                                                                                 >  1:287437/1‑149 (MQ=255)       tCCATTTGCGCATCGTGATAGGCCAACAGCGACTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAg                                                                                                                                              >  1:1084843/1‑150 (MQ=255)                   tCGTGATAGGCCAACAGCGACTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCgccc                                                                                                                                  >  1:1102364‑M2/1‑146 (MQ=255)                       gATAGGCCAACAGCGACTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCACCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCg                                                                                                                              >  2:611560/1‑150 (MQ=255)                          aGGCCAACAGCGACTGCAGAACACCCAGCACGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCa                                                                                                                           >  1:561375/1‑150 (MQ=255)                              cAACAGCGACTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGAt                                                                                                                       <  1:365089/150‑1 (MQ=255)                                     gACTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCgccggtcactggaccttgcccataccgctgaccagaacc                                                                                                                 >  1:353342‑M1/1‑111 (MQ=255)                                      aCTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGc                                                                                                               >  1:1112799/1‑150 (MQ=255)                                         gCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGATCGGCGCCCACCGCCAGGATGGCCTTGCCCt                                                                                                            >  2:1096312/1‑150 (MQ=255)                                          cAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTTACCGGCGCCCACCGCCAGGATGGCCTTGCCCTc                                                                                                           >  2:838143/1‑150 (MQ=255)                                                   cAGCGCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCGCCGGTCACTGGACCTGcccataccgctgaccagaaccagccagggctggcg                                                                                                    >  2:353342‑M2/1‑115 (MQ=255)                                                    aGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATg                                                                                                 >  1:560493/1‑150 (MQ=255)                                                      cTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTc                                                                                               <  2:1112799/150‑1 (MQ=255)                                                       tCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTTACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCg                                                                                              <  1:838143/150‑1 (MQ=255)                                                          ttGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGAtg                                                                                           >  1:1166804/1‑150 (MQ=255)                                                             cgcCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTCCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGAtgctg                                                                                        <  1:60780/150‑1 (MQ=255)                                                              gcCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGAtgctgt                                                                                       <  2:645149/150‑1 (MQ=255)                                                                   aTACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATgctgtgctgt                                                                                  <  1:402326/150‑1 (MQ=255)                                                                           ggCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATa                                                                          >  2:1207335/1‑150 (MQ=255)                                                                           ggCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCAACCGGTATGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATa                                                                          <  1:1055336/150‑1 (MQ=255)                                                                             cgcgGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACt                                                                        <  1:275220/150‑1 (MQ=255)                                                                              gcgGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCgccggtcactggaccttgcccatac                                                                                                                               >  1:880238‑M1/1‑70 (MQ=255)                                                                              gcgGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCgccggtcactggaccttgcccatac                                                                                                                               <  2:880238‑M1/95‑26 (MQ=255)                                                                                       ggCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGaaa                                                              <  2:1084843/150‑1 (MQ=255)                                                                                       ggCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGCCTGGTTCTGCTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCCATGCTGTGCTGTGCGCGATACTGCTCGAGaaa                                                              >  2:177107/1‑150 (MQ=255)                                                                                          aCTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGt                                                           >  1:774924/1‑150 (MQ=255)                                                                                              cccGCCTTGAGGTCGACGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCAACGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATcc                                                       >  1:594587/1‑150 (MQ=255)                                                                                              cccGCCGTGTGGTCGAAGCGCAAGACCTGGCTGGTTCTGGTCAGGGTTATGGGCAA‑TGTCCAGTATTCGGCGCCCACCGCCAGGATCGCCTTGCCCGCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGATAAAGGTATcc                                                       <  2:61515/150‑1 (MQ=255)                                                                                               ccGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGGGATGCTGCTCGAGAAAGGtctcga                                                      >  2:631385/1‑148 (MQ=255)                                                                                               ccGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAg                                                             >  2:492932/1‑143 (MQ=255)                                                                                               ccGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAg                                                             <  1:492932/143‑1 (MQ=255)                                                                                               ccGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTCCTCGAGAAAGGTATCca                                                      >  2:349291/1‑150 (MQ=255)                                                                                                              aGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGca                                       <  1:1028944/150‑1 (MQ=255)                                                                                                               tctccAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGcac                                      <  1:11405/147‑1 (MQ=255)                                                                                                                cgcCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCcaggtccagtgaccggcgcccataccgctgaccagaaccagccagggctggcgcttcgacctcaaggcgggcagtgccgaaatccgcgcccgtcgtatcgggcgcaacgcgctg                                      >  2:353342‑M1/1‑36 (MQ=255)                                                                                                                   cAGCCCTGGCTGGTTCCGGTCAGCGGTATGGGCCA‑GGACCAGTGACCGGCGCCCACCGCCAGGGTGGCCTTGCACTCGCCTGACATGTCGATGCTGTGCTGTGAGCGATGCTGCTCGTGTACGTTATTCACGTTGGTGCGTTGcaaaaga                                  >  2:11405/1‑145 (MQ=255)                                                                                                                    aGCCCTGGCTGGATCTGATCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCAcaccac                                 >  2:633664/1‑150 (MQ=255)                                                                                                                      cccTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACcg                               >  1:495345/1‑150 (MQ=255)                                                                                                                         tggctggTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACcgcgc                            <  2:495345/150‑1 (MQ=255)                                                                                                                          ggctggTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGaa                                                               >  2:351218/1‑114 (MQ=255)                                                                                                                          ggctggTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGaa                                                               <  1:351218/114‑1 (MQ=255)                                                                                                                              ggTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCgcccataccgctgaccagaaccagccagggctggcgcttcgacctcaaggcgggcagtgccgaaatccgcgcccgtcgtatcgggcgcaacgagctgggtgttctgcagtc                       >  1:353342‑M2/1‑39 (MQ=255)                                                                                                                                  cTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAg                   <  2:287437/150‑1 (MQ=255)                                                                                                                                    ggTCAGCGGTATGGTTAA‑GTTTCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCAATCAGAAGACGGCATAAGTGTGTGCTGTGCGCGATCCTGCAAGAGAACAGTATTTACATCGTTGCGTTGCACACCACCACGCGGTATGTAGGt                 <  1:611560/150‑1 (MQ=255)                                                                                                                                     gTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGa                                                                                                                        <  2:463821/46‑1 (MQ=255)                                                                                                                                     gTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGa                                                                                                                        >  1:463821/1‑46 (MQ=255)                                                                                                                                     gTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCGCTCGCCTGACATGTCGGTGCTGTGCTGTACGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTg                >  1:930806/1‑150 (MQ=255)                                                                                                                                        aGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTgcgc             >  1:286123/1‑150 (MQ=255)                                                                                                                                         gCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGcc            >  1:114755/1‑150 (MQ=255)                                                                                                                                          cGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCa           >  2:756612/1‑150 (MQ=255)                                                                                                                                            gTATGGGCAA‑GGTCCAGTGACCGGCgcccataccgctgaccagaaccagccagggctggcgcttcgacctcaaggcgggcagtgccgaaatccgc                                                                >  1:880238‑M2/1‑25 (MQ=255)                                                                                                                                            gTATGGGCAA‑GGTCCAGTGACCGGCgcccataccgctgaccagaaccagccagggctggcgcttcgacctcaaggcgggcagtgccgaaatccgc                                                                <  2:880238‑M2/95‑71 (MQ=255)                                                                                                                                             tATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTc        <  2:1166804/150‑1 (MQ=255)                                                                                                                                                gggCgccggtcactggaccttgcccataccgctgaccagaaccagccagggctggcgcttcgacctcaaggcgggcagtgccgaaatccgcgcccgtcgtatcgggcgcaacgagctgggtgttctgcagtcgctgttggcctatcacga      >  1:1102364‑M1/1‑4 (MQ=255)                                                                                                                                                   cAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGcc  >  2:172844/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                       GCGTAGTCCATTTGCGCATCGTGATAGGCCAACAGCGACTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAA‑GGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCC  >  NC_002947/3991210‑3991505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.