New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4395254 =	75 (1.530)	4 (0.090)	4/236	NT	5.8%	coding (564/594 nt)	PP_3871	hypothetical protein
	?	NC_002947	4395288 =	59 (1.270)					coding (530/594 nt)	PP_3871	hypothetical protein

GCAACCAGTACGCATCGCGCGGCACTTCGCGCCCTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCAAGCTCGTATTCATGCCAGGTTTCGGCGGGCTCACTGCCGCGGT  >  NC_002947/4395107‑4395399                                                                                                                                                    |                                                                                                                                                   gcAACCAGTACGCATCGCGCGGCACTTCGCGCCCTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCAc                                                                                                                                                  >  2:1272064/1‑150 (MQ=255)      cAGTACGCATCGCGCGGCACTTCGCGCCCTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGa                                                                                                                                             >  2:471086/1‑150 (MQ=255)           cGCATCGCGCGGCACTTCGCGCCCTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCGTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCgg                                                                                                                                        <  1:1039983/150‑1 (MQ=255)            gCATCGCGCGGCACTTCGCGCCCTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTGGTTCGGTGGGCGAGCGCACTTCGCCCCggg                                                                                                                                       >  2:211267/1‑149 (MQ=255)              aTCGCGCGGCACTTCGCGCCCTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCa                                                                                                                                    >  2:450783/1‑150 (MQ=255)              aTCGCGCGGCACTTCGCGCCCTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCa                                                                                                                                    >  2:71700/1‑150 (MQ=255)                   gcgGCACTTCGCGCCCTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAgg                                                                                                                               >  1:214986/1‑150 (MQ=255)                   gcgGCACTTCGCGCCCTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAgg                                                                                                                               >  2:1199014/1‑150 (MQ=255)                     ggCACTTCGCGCCCTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGcc                                                                                                                             >  2:609730/1‑150 (MQ=255)                          ttCGCGCCCTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGc                                                                                                                        >  2:307071/1‑150 (MQ=255)                           tCGCGCCCTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCg                                                                                                                       >  1:1228776/1‑150 (MQ=255)                             gcgcCCTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGaa                                                                                                                     <  1:450783/150‑1 (MQ=255)                             gcgcCCTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGaa                                                                                                                     >  1:653816/1‑150 (MQ=255)                               gcCCTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAgt                                                                                                                   >  1:729173/1‑150 (MQ=255)                                cccTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAgtg                                                                                                                  <  1:71700/150‑1 (MQ=255)                                   ttCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTgg                                                                                                               >  1:1123147/1‑150 (MQ=255)                                      cggcggCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTg                                                                                                            <  1:307071/150‑1 (MQ=255)                                        gcggcAGCACGTCGCCCAGTTCCTGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTggg                                                                                                          <  1:859145/150‑1 (MQ=255)                                        gcggcAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTggg                                                                                                          <  2:1201422/150‑1 (MQ=255)                                        gcggcAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTggg                                                                                                          <  1:471086/150‑1 (MQ=255)                                        gcggcAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTggg                                                                                                          <  1:211267/150‑1 (MQ=255)                                        gcggcAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTggg                                                                                                          <  2:1221336/150‑1 (MQ=255)                                        gcggcAGAACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTggg                                                                                                          <  1:1018393/150‑1 (MQ=255)                                           gcagcaCGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTc                                                                                                       <  2:1010875/150‑1 (MQ=255)                                             agcaCGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCtt                                                                                                     <  2:653816/150‑1 (MQ=255)                                                  gccgccCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGa                                                                                                <  2:1203792/150‑1 (MQ=255)                                                      cccAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATc                                                                                                                                  <  2:393999/112‑1 (MQ=255)                                                      cccAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATc                                                                                                                                  >  1:393999/1‑112 (MQ=255)                                                      cccAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGAtcca                                                                                            <  1:609730/150‑1 (MQ=255)                                                             ccGGATCGGGCACGACGCGGCCCTCCACCGGATACATGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGAtccaggctgtc                                                                                     <  2:839291/150‑1 (MQ=255)                                                               ggATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGtgtg                                                                                                                <  1:377260/121‑1 (MQ=255)                                                               ggATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGtgtg                                                                                                                >  2:377260/1‑121 (MQ=255)                                                                gATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGAtccaggctgtccag                                                                                  <  1:366034/150‑1 (MQ=255)                                                                 aTCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGAtccaggctgtccagg                                                                                 <  2:769830/150‑1 (MQ=255)                                                                     ggCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTAGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGa                                                                             >  2:628705/1‑150 (MQ=255)                                                                        acgacgCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCAGGAGCAT‑AGACCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGt                                                                          >  2:815424/1‑150 (MQ=255)                                                                                gCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGccc                                                                  <  2:214986/150‑1 (MQ=255)                                                                                gCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGccc                                                                  >  2:1280202/1‑150 (MQ=255)                                                                                   cTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTc                                                               >  2:819001/1‑150 (MQ=255)                                                                                    gcctgccgccgctgaagggcatcgacttcagcctggacagcctggatccgaaagaccccaaccaCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTgg                                                                                                           >  2:730357‑M1/65‑105 (MQ=255)                                                                                    gcctgccgccgctgaagggcatcgacttcagcctggacagcctggatccgaaagaccccaaccaCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTgg                                                                                                           <  1:730357‑M1/41‑1 (MQ=255)                                                                                        ccGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGAtccaggctgtccaggct                                                                               >  1:1198455/1‑129 (MQ=255)                                                                                        ccGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGAtccaggctgtccaggct                                                                               <  2:1198455/129‑1 (MQ=255)                                                                                         cGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAgcggc                                                         <  2:47786/150‑1 (MQ=255)                                                                                                acGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGAtccaggct                                                                                        >  2:1279636/1‑112 (MQ=255)                                                                                                acGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGAtccaggct                                                                                        <  1:1279636/112‑1 (MQ=255)                                                                                                acGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGc                                                  >  1:827740/1‑150 (MQ=255)                                                                                                acGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGc                                                  >  2:289596/1‑150 (MQ=255)                                                                                                acGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGc                                                  >  2:838507/1‑150 (MQ=255)                                                                                                  ggTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCt                                                                                                      <  2:304663/96‑1 (MQ=255)                                                                                                  ggTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCt                                                                                                      >  1:304663/1‑96 (MQ=255)                                                                                                  ggTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCa                                                <  2:827740/150‑1 (MQ=255)                                                                                                    tGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATc                                              <  1:289596/150‑1 (MQ=255)                                                                                                    gggcatcgacttcagcctggacagcctggatccgaaagaccccaaccaCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTg                                                                                                            >  2:490924‑M1/49‑88 (MQ=255)                                                                                                    gggcatcgacttcagcctggacagcctggatccgaaagaccccaaccaCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTg                                                                                                            <  1:490924‑M1/40‑1 (MQ=255)                                                                                                     gATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCa                                             <  1:78019/150‑1 (MQ=255)                                                                                                      aTTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAgc                                                            <  1:1191612/134‑1 (MQ=255)                                                                                                      aTTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAgc                                                            >  2:1191612/1‑134 (MQ=255)                                                                                                       ttCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCAAg                                           <  1:1163169/150‑1 (MQ=255)                                                                                                          gAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCAAGCTc                                        <  1:1280202/150‑1 (MQ=255)                                                                                                             tCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCAAGCTCGTa                                     <  1:1199014/150‑1 (MQ=255)                                                                                                               aTGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGAtccag                                                                                           >  2:1051585/1‑94 (MQ=255)                                                                                                               aTGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGAtccag                                                                                           <  1:1051585/94‑1 (MQ=255)                                                                                                                tGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAg                                                                                                                                <  2:241956/56‑1 (MQ=255)                                                                                                                tGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAg                                                                                                                                >  1:241956/1‑56 (MQ=255)                                                                                                                tGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCAAGCTCGTATTc                                  <  2:940810/150‑1 (MQ=255)                                                                                                                  gggATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCAAGCTCGTATTCAt                                <  1:399151/150‑1 (MQ=255)                                                                                                                        aCCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCAAGCTCGTAt                                    <  2:410773/140‑1 (MQ=255)                                                                                                                        aCCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCAAGCTCGTAt                                    >  1:410773/1‑140 (MQ=255)                                                                                                                        aCCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCAAGCTCGTATTCATGCCAgg                          >  2:992045/1‑150 (MQ=255)                                                                                                                         cccTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGTAGGCTTGCAAGCTCGTATTCATGCCAGGt                         >  1:643123/1‑150 (MQ=255)                                                                                                                         cccTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCAAGCTCGTATTCATGCCAGGt                         >  2:804596/1‑150 (MQ=255)                                                                                                                          ccTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAg                                                                           <  2:715701/99‑1 (MQ=255)                                                                                                                          ccTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAg                                                                           >  1:715701/1‑99 (MQ=255)                                                                                                                          ccTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCAAGCTCGTATTCATGCCAGGtt                        >  2:646930/1‑150 (MQ=255)                                                                                                                          ccTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCAAGCTCGTATTCATGCCAGGtt                        >  1:224678/1‑150 (MQ=255)                                                                                                                                  tAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGAtccaggctgtccaggc                                                                                <  1:282971/86‑1 (MQ=255)                                                                                                                                  tAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGAtccaggctgtccaggc                                                                                >  2:282971/1‑86 (MQ=255)                                                                                                                                          tGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCAAGCTCGTATTCATGCCAGGTTTCGGCGGGCTCACTGc        <  1:123471/150‑1 (MQ=255)                                                                                                                                             aaaaGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCAAGCTCGTATTCATGCCAGGTTTCGGCGGGCTCACTGCcgc     <  2:1228776/150‑1 (MQ=255)                                                                                                                                                aGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCAAGCTCGTATTCATGCCAGGTTTCGGCGGGCTCACTGCCGCGGt  <  1:1272064/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                   GCAACCAGTACGCATCGCGCGGCACTTCGCGCCCTTCCGGCGGCAGCACGCCGCCCAGTTCCGGATCGGGCACGACGCGGCCCTCCACCGGATACACGGTGATTCGAGTCATGGGGATTACCCTTGTGGTAGTTCGGTGGAAAAGCGCACTTCGACCCGG‑CCATCAGGCCCAGGCGAAGTGTGGTTGGGGTCTTTCGGATCCAGGCTGTCCAGGCTGAAGTCGATGCCCTTCAGCGGCGGCAGGCCATCAAGCTCGTATTCATGCCAGGTTTCGGCGGGCTCACTGCCGCGGT  >  NC_002947/4395107‑4395399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.