| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5443256 | 60 (1.220) | 4 (0.090) | 4/238 | NT | 6.6% | coding (1572/1989 nt) | PP_4781 | sensor histidine kinase |
| ? | NC_002947 | = 5443262 | 56 (1.200) | coding (1566/1989 nt) | PP_4781 | sensor histidine kinase | |||||
AGGTCAACGCCAGATCATCCGGCCCCACCCGGCGGCCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGTGCCGGCTGCGCCCGCAGGCGGCCGGCCTGCAGTTCGGACAGGGTAA > NC_002947/5443111‑5443404 | aGGTCAACGCCAGATCATCCGGCCCCACCCGGCGGCCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGt < 2:1097333/150‑1 (MQ=255) gTCAACGCCAGATCATCCGGCCCCACCCGGCGGCCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCg > 2:818799/1‑150 (MQ=255) cAACGCCAGATCATCCGGCCCCACCCGGCGGCCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGgc > 2:142642‑M2/1‑148 (MQ=255) aaCGCCAGATCATCCGGCCCCACCCGGCGGCCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGgcc > 1:71442‑M2/1‑147 (MQ=255) aaCGCCAGATCATCCGGCCCCACCCGGCGGCCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGgcc < 1:565142‑M2/150‑4 (MQ=255) aaCGCCAGATCATCCGGCCCCACCCGGCGGCCGCGCACATGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGgcc < 1:267050‑M2/150‑4 (MQ=255) gCCAGATCATCCGGCCCCACCCGGCGGCCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGgccgga > 1:818799‑M2/1‑144 (MQ=255) aGATCATCCGGCCCCACCCGGCGGCCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATg > 1:1036654/1‑150 (MQ=255) gATCATCCGGCCCCACCCGGCGGCCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGt > 1:384077/1‑150 (MQ=255) atcatcCGGCCCCACCCGGCGGCCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTc < 2:1072825/150‑1 (MQ=255) catcCGGCCCCACCCGGCGGCCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCa > 1:209441/1‑150 (MQ=255) ccGGCCCCACCCGGCGGCCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGc > 1:98610/1‑150 (MQ=255) ggCCCCACCCGGCGGCCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTc > 1:433642/1‑150 (MQ=255) ccccACCCCGCGGCCGCGCACCTGGAACATCACACCGCCCTGATGGGTGAACTTCAAACCGGTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCACGTCACCGTGCAACCCGTCCGGCAGGTCGGCCGGAACGTCCCGGCtaaa < 2:1216862/150‑4 (MQ=255) ccGGCGGCCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAg > 1:757137/1‑138 (MQ=255) ccGGCGGCCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAg < 2:757137/138‑1 (MQ=255) ggcggcCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGc < 1:717394/150‑1 (MQ=255) cggcCGCGCACCTGGATCATCACGCCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCt < 2:947673/150‑1 (MQ=255) ggcCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCtt > 2:518432/1‑150 (MQ=255) cTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCCGACCTgccggacgggttgctcggtgacg < 1:92674‑M2/132‑24 (MQ=255) cTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCCGACCTgccggacgggttgctcggtgacg > 2:92674‑M2/1‑109 (MQ=255) cTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTc > 2:653323/1‑108 (MQ=255) cTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTc < 1:653323/108‑1 (MQ=255) atcaCACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAgg < 2:628165/129‑1 (MQ=255) atcaCACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAgg > 1:628165/1‑129 (MQ=255) tcaCACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCgg > 1:463761/1‑150 (MQ=255) tcaCACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCgg < 2:384077/150‑1 (MQ=255) cacaCCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGc > 1:923283/1‑150 (MQ=255) acacCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCa < 2:370480/150‑1 (MQ=255) cacCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCAt > 1:154155/1‑150 (MQ=255) ccGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATaa > 1:924131/1‑150 (MQ=255) cGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAAc > 1:625913/1‑150 (MQ=255) cGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAAc < 2:209441/150‑1 (MQ=255) atccTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAAcc > 2:1057712/3‑150 (MQ=255) gTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCaaa < 2:565142/150‑1 (MQ=255) gTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCaaa > 1:849742/1‑150 (MQ=255) cAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCATGCCCGGCATAACCGGCGCGCAAACCCTGCaa < 2:942120/150‑1 (MQ=255) aaaCCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCCGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAAc < 1:270651/150‑1 (MQ=255) aaCCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACa < 2:267050/150‑1 (MQ=255) aaCCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACa > 2:1222781/1‑150 (MQ=255) aCCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTcc > 2:643003/1‑85 (MQ=255) aCCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTcc < 1:643003/85‑1 (MQ=255) ccGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAgg < 2:326350/150‑1 (MQ=255) tGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGgcgc < 1:131868/150‑1 (MQ=255) caccaGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAg > 1:497457/1‑150 (MQ=255) caccaGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAg > 2:382567/1‑150 (MQ=255) ccaGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTc < 1:830977/80‑1 (MQ=255) ccaGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTc > 2:830977/1‑80 (MQ=255) caGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCCGACCTgccggacgggttgctcggtgacgggcag < 2:704235‑M2/89‑29 (MQ=255) caGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCCGACCTgccggacgggttgctcggtgacgggcag > 1:704235‑M2/1‑61 (MQ=255) cccAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGt < 1:518432/150‑1 (MQ=255) cccAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGt < 1:382567/150‑1 (MQ=255) cccAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGt < 2:745917/150‑1 (MQ=255) ccAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCttt < 1:1030929/85‑1 (MQ=255) ccAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCttt > 2:1030929/1‑85 (MQ=255) gcgcCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGTGCCGGCTgcg < 2:463761/150‑1 (MQ=255) cAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAg < 1:265573/36‑1 (MQ=255) cAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAg > 2:265573/1‑36 (MQ=255) cAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGTGCCGGCTGCGCCCg > 1:191873/1‑150 (MQ=255) cAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCCCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGTGCCGGCTGCGCCCg > 2:411878/1‑150 (MQ=255) aGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGgc > 2:973672/1‑119 (MQ=255) aGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGgc < 1:973672/119‑1 (MQ=255) cTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGTGCCGGCTGCGCCCGCAg < 2:98610/150‑1 (MQ=255) tCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGTGCCGGCTGCGCCCGCAggc < 2:849742/150‑1 (MQ=255) cTGCCCGTCACCGAGCAACCCGTCCGGCaggtcggccggacgggttgctcggtgacgggcagaagctggcgcactgcctgggttgcctg < 2:704235‑M1/89‑62 (MQ=255) cTGCCCGTCACCGAGCAACCCGTCCGGCaggtcggccggacgggttgctcggtgacgggcagaagctggcgcactgcctgggttgcctg > 1:704235‑M1/1‑28 (MQ=255) tGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGTGCCGGCTGCGCCCGCAggcgg > 1:458273/1‑150 (MQ=255) cccGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAgg > 2:549148/1‑118 (MQ=255) cccGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAgg < 1:549148/118‑1 (MQ=255) cccGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGTGCCGGCTGCGCCCGCAGGcggcc > 1:1232767/1‑150 (MQ=255) cGTCACCGAGCAACCCGTCCGGCaggtcggccggacgggttgctcggtgacgggcagaagctggcgcactgcctgggttgcctggtggacaacggtttgaagttcacccatcagggcggtgtgatgatccag < 1:92674‑M1/132‑110 (MQ=255) cGTCACCGAGCAACCCGTCCGGCaggtcggccggacgggttgctcggtgacgggcagaagctggcgcactgcctgggttgcctggtggacaacggtttgaagttcacccatcagggcggtgtgatgatccag > 2:92674‑M1/1‑23 (MQ=255) gTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGTGCCGGCTGCGCCCGCAGGcggccggc < 2:625913/150‑1 (MQ=255) gTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGTGCCGGCTGCGCCCGCAGGcggccggc > 2:196906/1‑150 (MQ=255) gTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGTGCCGGCTGCGCCCGCAGGcggccggc < 2:1232767/150‑1 (MQ=255) aaCCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGTGCCGGCTGCGCCCGCAGGCGGCCGGCCTGCAGTTCg < 2:458273/150‑1 (MQ=255) cccGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGTGCCGGCTGCGCCCGCAGGCGGCCGGCCTGCAGTTCGGa > 2:748242/1‑150 (MQ=255) gTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCCCGCAGGCTGAACGGTGCCGGCTGCGCCCGCAGGCGGCCGGCCTGCAGTTCGGACAg < 1:229209/150‑1 (MQ=255) tCCGGCcgacctgccggacgggttgctcggtgacgggcagaagctggcgcactgcctgggttgcctggtggacaacggtttgaagttcacccatcagggcggtgtgatgatccaggtgcgcggccgccgggtggggccggatgatctggc > 1:818799‑M1/1‑6 (MQ=255) ggCcgacctgccggacgggttgctcggtgacgggcagaagctggcgcactgcctgggttgcctggtggacaacggtttgaagttcacccatcagggcggtgtgatgatccatgtgcgcggccgccgggtggggccggatgatctggcgtt < 1:267050‑M1/150‑148 (MQ=255) ggCcgacctgccggacgggttgctcggtgacgggcagaagctggcgcactgcctgggttgcctggtggacaacggtttgaagttcacccatcagggcggtgtgatgatccaggtgcgcggccgccgggtggggccggatgatctggcgtt < 1:565142‑M1/150‑148 (MQ=255) ggCcgacctgccggacgggttgctcggtgacgggcagaagctggcgcactgcctgggttgcctggtggacaacggtttgaagttcacccatcagggcggtgtgatgatccaggtgcgcggccgccgggtggggccggatgatctggcgtt > 1:71442‑M1/1‑3 (MQ=255) gCcgacctgccggacgggttgctcggtgacgggcagaagctggcgcactgcctgggttgcctggtggacaacggtttgaagttcacccatcagggcggtgtgatgatccaggtgcgcggccgccgggtggggccggatgatctggcgttg > 2:142642‑M1/1‑2 (MQ=255) | AGGTCAACGCCAGATCATCCGGCCCCACCCGGCGGCCGCGCACCTGGATCATCACACCGCCCTGATGGGTGAACTTCAAACCGTTGTCCACCAGGCAACCCAGGCAGTGCGCCAGCTTCTGCCCGTCACCGAGCAACCCGTCCGGCAGGTCGGCCGGAATGTCCAGGCTCAGGTACAGGCCTTTGCCCAGCGCCTGCCCGGCATAACCGGCGCGCAAACCCTGCAACAGGGCGCGCAGGCTGAACGGTGCCGGCTGCGCCCGCAGGCGGCCGGCCTGCAGTTCGGACAGGGTAA > NC_002947/5443111‑5443404 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |