| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5519873 = | 64 (1.300) | 5 (0.110) | 4/230 | NT | 7.2% | intergenic (‑96/‑130) | PP_4852/PP_4853 | AraC family transcriptional regulator/DMT superfamily permease |
| ? | NC_002947 | 5519958 = | 70 (1.550) | intergenic (‑181/‑45) | PP_4852/PP_4853 | AraC family transcriptional regulator/DMT superfamily permease | |||||
GGGCCGGCAGTTGGGTGAACTGGGGGATATCGAGGTATTTACGCGGCATGCTGTCTGCTTTGCAGGGTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCAGCCCCCAGCGAGTACCCTGCTGCATGAACTACCTGTTCCCCC > NC_002947/5519729‑5520021 | gccgatctccgcagggtggatggcaccggcggacatcttggtgaccacggtgttgccggcccagatgaggatggcggtgagggggaacaggtagttcatgcagcagggtactcgctgggggctggaatggggctgctttgcagcCCTTcg < 2:904248‑M1/6‑1 (MQ=255) atctccgcagggtggatggtaccggcggacatcttggtcaccacggtgttgccggcccagatgaggctggcggtgagggggtccaggtagttcatgcagcagggtactccctggtggctggaatggggctgctttgcagcCCTTCGCggg > 1:425187‑M1/141‑150 (MQ=255) atctccgcagggtggatggcaccggcggacatcttggtgaccacggtgttgccggcccagatgaggatggcggtgagggggaacaggtagttcatgcagcagggtactcgctgggggctggaatggggctgctttgcagcCCTTCGCggg > 1:1076886‑M1/141‑150 (MQ=255) tccgcagggtggatggcaccggcggacatcttggtgaccacggtgttgccggcccagatgaggatggcggtgagggggaacaggtagttcatgcagcagggtactcgctgggggctggaatggggctgctttgcagcCCTTCGCGGGCTc < 1:187751‑M1/13‑1 (MQ=255) aaCTGGGGGATATCGAGGTATTTACGCGGCATGCTGTCTGCTTTGCAGGGTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCca < 1:982750/150‑1 (MQ=255) gggggATATCGAGGTATTTACGCGGCATGCTGTCTGCTTTGCAGGGTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAgg < 2:1055281/150‑1 (MQ=255) ggggATATCGAGGTATTTACGCGGCATGCTGTCTGCTTTGCAGGGTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGa > 2:407268/1‑150 (MQ=255) ggATATCGAGGTATTTACGCGGCATGCTGTCTGCTTTGCAGGGTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTcc > 1:919199/1‑134 (MQ=255) ggATATCGAGGTATTTACGCGGCATGCTGTCTGCTTTGCAGGGTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTcc < 2:919199/134‑1 (MQ=255) tCGAGGTATTTACGCGGCATGCTGTCTGCTTTGCAGGGTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTgcgc > 2:393720/1‑150 (MQ=255) ggacatcttggtgaccacggtgttgccggcccagatgaggatggcggtgagggggaacaggtagttcatgcagcagggtactcgctgggggctggaatggggctgctttgcagcCCTTCGCggg > 1:932642‑M1/115‑124 (MQ=255) ggacatcttggtgaccacggtgttgccggcccagatgaggatggcggtgagggggaacaggtagttcatgcagcagggtactcgctgggggctggaatggggctgctttgcagcCCTTCGCggg < 2:932642‑M1/10‑1 (MQ=255) aGGTATTTACGCGGCATGCTGTCTGCTTTGCAGGGTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCC‑CCCACAGGATCTGCGCCAg > 2:235527/1‑150 (MQ=255) tttACGCGGCATGCTGTCTGCTTTGCAGGGTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTcc > 2:929751/1‑150 (MQ=255) cgcgGCATGCTGTCTGCTTTGCAGGGTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGc < 1:504933/150‑1 (MQ=255) tGCTGTCTGCTTTGCAGGGTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTa > 2:1179594/1‑150 (MQ=255) tGCTTTGCAGGGTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCg > 2:134043/1‑150 (MQ=255) cTTTGCAGGGTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTa < 1:1021546/150‑1 (MQ=255) tttGCAGGGTCGGTTGTCTGCATAGGAGCATAGGGTTGTAGACAGACACTGGATAAGACGGGCCTATCCAGGACGCCCCTTCCAGGCGTCCGCGCGAT‑CCCGCTGCTCCCAGGATCTACGCACGCCGCCAGGGCTAAGTATCTCCCGtcc > 2:195197/1‑148 (MQ=255) tGCAGGGTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGa < 1:52278/150‑1 (MQ=255) ccagatgaggatggcggtgagggggaacaggtagttcatgcagcagggtactcgctgggggctggaatggggctgctttgcagcCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGa < 2:1121566‑M1/66‑1 (MQ=255) ggTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGGCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCggg > 1:522443/1‑150 (MQ=255) ggTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCggg < 1:407268/150‑1 (MQ=255) ggTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCggg < 1:393720/150‑1 (MQ=255) cgtttGTCTGTATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTc < 1:216974/147‑1 (MQ=255) gatggcggtgagggggaacaggtagttcatgcagcagggtactcgctgggggctggaatggggctgctttgcagcCCTTCGCGGGCTCCCCGTC‑CCCACAGTATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCa > 1:1121566‑M1/76‑150 (MQ=255) gTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACATGCCTATCGAGCACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCAc < 1:307607/150‑1 (MQ=255) tCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCcgc > 2:617895/1‑150 (MQ=255) tCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATATGTGACAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCcgc > 1:781001/1‑150 (MQ=255) tGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGc < 1:1199000/136‑1 (MQ=255) tGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGc > 2:1199000/1‑136 (MQ=255) tgagggggaacaggtagttcatgcagcagggtactcgctgggggctggaatggggctgctttgcagcCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGaa > 1:1143818‑M1/68‑150 (MQ=255) gagggggaacaggtagttcatgcagcagggtactcgctgggggctggaatggggctgctttgcagcCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAg > 2:361085‑M1/67‑150 (MQ=255) gagggggaacaggtagttcatgcagcagggtactcgctgggggctggaatggggctgctttgcagcCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAg > 2:187751‑M1/67‑150 (MQ=255) gATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAg > 1:231881/1‑150 (MQ=255) gAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCt < 1:617895/150‑1 (MQ=255) gAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTACCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCt < 1:929751/150‑1 (MQ=255) taGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAag > 1:122449/1‑150 (MQ=255) aGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAagc > 1:101131/1‑150 (MQ=255) ggCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAagca < 2:389612/150‑1 (MQ=255) agacagacACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCtg > 2:1161092/1‑97 (MQ=255) agacagacACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCtg < 1:1161092/97‑1 (MQ=255) agacagacACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCa > 1:331044/1‑122 (MQ=255) agacagacACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCa < 2:331044/122‑1 (MQ=255) gacagacaCTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCAtt > 1:1092710/1‑150 (MQ=255) acagacaCTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTAt > 1:1050578/1‑100 (MQ=255) acagacaCTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTAt < 2:1050578/100‑1 (MQ=255) agacaCTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCa < 1:134043/150‑1 (MQ=255) acacTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCAGc > 1:531663/1‑150 (MQ=255) acacTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGAT‑CCCACAGGATCTGCGCCATCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTTCCAGc > 2:76182/1‑150 (MQ=255) cacTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTCACATCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCAGcc > 1:462134/1‑150 (MQ=255) cacTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAag < 2:772993/134‑1 (MQ=255) cacTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAag > 1:772993/1‑134 (MQ=255) agggtactcgctgggggctggaatggggctgctttgcagcCCTTcg > 2:1096495‑M1/41‑46 (MQ=255) agggtactcgctgggggctggaatggggctgctttgcagcCCTTcg < 1:1096495‑M1/6‑1 (MQ=255) acTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCAGccc < 1:1020619/150‑1 (MQ=255) gATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCGTTCCAGCCCCCAg > 1:904248/1‑150 (MQ=255) gATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCa > 2:148073/1‑142 (MQ=255) gATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCa < 1:148073/142‑1 (MQ=255) gATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATACCGCCGCGTAGGGAGTGCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCAGCCCCCac > 2:33714/1‑149 (MQ=255) aataCAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCAGCCCCCAGCGa < 1:846001/150‑1 (MQ=255) aataCAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCAGCCCCCAGCGa < 2:531663/150‑1 (MQ=255) ctaCATGCGTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCAACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTGCACCCGCGAAGGCCTGCAAGGCAGGTCCATTCCAGCCCCCAGCGAg < 1:195197/149‑1 (MQ=255) gCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCAGCCCCCAGCGAGTACCct > 1:277901/1‑150 (MQ=255) cTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCAGCCCCCAGCGAGTACCctgc < 1:1188101/150‑1 (MQ=255) tATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTa < 1:798844/85‑1 (MQ=255) tATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTa > 2:798844/1‑85 (MQ=255) tATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGTAAAGCAGCCCCATTCCAGCCCCCAGCGAGTACCctgct < 1:1179594/150‑1 (MQ=255) tCGAGGACCTGCCTTGCACGCCTTCGCGGGCTCCCCGCT‑CCCCCAGGATCTGCGCCAGCCTCCAGGCCTATGTATCCCCCGTAGAAGCGGGTTCACCCCCGAAGGGATGGCTAGCAGCCCCATTCCACCCCCCAGCGAGTACCctgctgg > 1:1107890/1‑149 (MQ=255) gacgtaccTTGCAGGCGTTCGCGAGCTCCCCGCT‑CCCACAGGATGTGCGCCAGGCTCCAGGCCTGTGTATCCCACGTAGGGGCGGGTTCACCCGCGAAGGGCTGCGAAGCAGCCCGATTCATGCCCCCAGCGAGTACGCTGCTGAACGaa > 2:66852/7‑150 (MQ=25) ccTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAggg > 2:565580/1‑99 (MQ=255) ccTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAggg < 1:565580/99‑1 (MQ=255) cTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCAGCCCCCAGCGAGTACCCTGCTGCATGACCtc > 2:349371/1‑149 (MQ=255) tgacTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCAGCCCCCAGCGAGTACCCTGCTGCATGAACTAc > 1:1284105/4‑150 (MQ=255) tGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACATGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCAGCCCCCAGCGAGTACCCTGCTGCATGAACTAc > 2:361911/1‑150 (MQ=255) tGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAggg < 2:767799/97‑1 (MQ=255) tGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAggg > 1:767799/1‑97 (MQ=255) aGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCAGCCCCCAGCGAGTACCCTGCTGCATGAAc > 1:21704/1‑139 (MQ=255) aGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCAGCCCCCAGCGAGTACCCTGCTGCATGAAc < 2:21704/139‑1 (MQ=255) gCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCAGCCCCCAGCGAGTACCCTGCTGCATGAACTACCTGTTccccc < 2:122449/150‑1 (MQ=255) | GGGCCGGCAGTTGGGTGAACTGGGGGATATCGAGGTATTTACGCGGCATGCTGTCTGCTTTGCAGGGTCGGTTGTCTGGATAGAAGTATAGGCTTGTAGACAGACACTCGATAATACAGGCCTATCGAGGACCTGCCTTGCAGGCCTTCGCGGGCTCCCCGCT‑CCCACAGGATCTGCGCCAGCCTCCAGGCCTGTGTATCCCCCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCATTCCAGCCCCCAGCGAGTACCCTGCTGCATGAACTACCTGTTCCCCC > NC_002947/5519729‑5520021 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |