New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 556297 | 40 (0.820) | 5 (0.110) | 5/230 | NT | 11.1% | coding (231/315 nt) | rplX | 50S ribosomal protein L24 |
? | NC_002947 | = 556309 | 43 (0.950) | coding (243/315 nt) | rplX | 50S ribosomal protein L24 |
GTCTGGTTATCGGTGGCGTGAACCTGGTCAAGCGTCATACCAAGCCTAACCCGATGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGG > NC_002947/556161‑556453 | gTCTGGTTATCGGTGGCGTGAACCTGGTCAAGCGTCATACCAAGCCTAACCCGATGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCg < 1:1276055‑M2/150‑2 (MQ=255) ggTGGCGTGAACCTGGTCAAGCGTCATACCAAGCCTAACCCGATGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCaaa < 2:1244501/150‑1 (MQ=255) gCGTGAACCTGGTCAAGCGTCATACCAAGCCTAACCCGATGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTag < 2:1276055/150‑1 (MQ=255) gCGTCATACCAAGCCTAACCCGATGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCgttggtttc > 2:379422‑M2/1‑118 (MQ=255) gCGTCATACCAAGCCTAACCCGATGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCgttggtttc < 1:379422‑M2/127‑10 (MQ=255) gCGTCATACCAAGCCTAACCCGATGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAAt > 2:1005676/1‑150 (MQ=255) gCGTCATACCAAGCCTAACCCGATGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAAt > 1:432580/1‑150 (MQ=255) gTCATACCAAGCCTAACCCGATGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGTCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTc > 2:1108887/1‑150 (MQ=255) cATACCAAGCCTAACCCGATGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCgt < 2:432580/150‑1 (MQ=255) cAAGCCTAACCCGGTGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGTCTCTGCACGCTTTCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTTGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCtt > 2:155216/1‑150 (MQ=255) cAAGCCTAACCCGATGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACAAACAAGGCTGACCGCATTGGTTTAGAAGTAGAAGACGGTAAAAAAATTCGTGTCtt > 2:302234/1‑150 (MQ=255) cTAACCCGATGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGt > 2:171777/1‑150 (MQ=255) cTAACCCGATGGCGGGCCTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGt > 2:657313/1‑150 (MQ=255) aaccGATGGAGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCATCTGCACGCTTCCAACGTTGCCATATTCAACAGTAAAAACAACAAGGCTGACCGCGTTGGTTTCAAAGTAAAAAAAAAAAAAAAAATTCGTGTCTTCAAGTCGa < 2:427543/148‑1 (MQ=255) aCCCGATGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGa < 1:167319/150‑1 (MQ=255) ccGATGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGAcc > 2:670725/1‑150 (MQ=255) gATGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCCGCGACACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCTCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTTTTTTCAAGTCGAccaa > 2:313638/1‑148 (MQ=255) gcgggcgTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCaaaaa < 2:54699/150‑1 (MQ=255) cgTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGt < 1:670725/150‑1 (MQ=255) aGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCaa < 1:273743/127‑1 (MQ=255) aGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCaa > 2:273743/1‑127 (MQ=255) aGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATg > 1:221715/1‑150 (MQ=255) aGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATg < 1:1108887/150‑1 (MQ=255) gggCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGc < 1:657313/150‑1 (MQ=255) gtcgAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCaaaaa > 1:419909/1‑129 (MQ=255) gtcgAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCaaaaa < 2:419909/129‑1 (MQ=255) gagaAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCgtgt < 2:293387/107‑1 (MQ=255) gagaAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCgtgt > 1:293387/1‑107 (MQ=255) gagaAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTa > 1:13563/1‑150 (MQ=255) gaaagaaGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAgg > 1:74803/1‑150 (MQ=255) gaagCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGATAAAAAAATTCGTGTCTTCAAGTCGAccc > 2:1190119/1‑115 (MQ=255) gaagCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGATAAAAAAATTCGTGTCTTCAAGTCGAccc < 1:1190119/115‑1 (MQ=255) aagCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTagaa < 2:74803/150‑1 (MQ=255) ctctGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCAt > 2:1065719/1‑150 (MQ=255) aCGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAg < 1:1020962/108‑1 (MQ=255) aCGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAg > 2:1020962/1‑108 (MQ=255) gCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGAc > 2:1220923/1‑150 (MQ=255) aTCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTAcc > 1:842823/1‑150 (MQ=255) cAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAAc < 2:842823/150‑1 (MQ=255) aaCGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAgg > 2:270084/1‑110 (MQ=255) aaCGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAgg < 1:270084/110‑1 (MQ=255) aCGGTGAAACCAACAAGGCTGACCGCgttggtttcaccgttgaagatggcaacgttggaagcgtgcagaggcgcttctttctcgacgataccgccctgtacgcccgccatcgggttaggcttg < 1:206786‑M2/123‑98 (MQ=255) aCGGTGAAACCAACAAGGCTGACCGCgttggtttcaccgttgaagatggcaacgttggaagcgtgcagaggcgcttctttctcgacgataccgccctgtacgcccgccatcgggttaggcttg > 2:206786‑M2/1‑26 (MQ=255) ggggAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGaaa < 1:146977/147‑1 (MQ=255) gTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAAt < 1:155216/150‑1 (MQ=255) tGAAACCAACAAGGCTGACCGCgttggtttcaccgttgaagatggcaacgttggaagcgtgcagaggcgcttctttctcgacgataccgccctgtacgcccgccatcgggttaggcttggtatgacgcttgaccagattcacgccaccga < 2:95787‑M2/150‑129 (MQ=255) aCCAACAAGGCTGACCGCgttggtttcaccgttgaagat > 1:802067‑M2/1‑18 (MQ=255) aCCAACAAGGCTGACCGCgttggtttcaccgttgaagat < 2:802067‑M2/39‑22 (MQ=255) acaaGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTTAAAGAGATTGACCGGAACGAAATCGCTCCTaa < 2:13563/150‑1 (MQ=255) caaGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAg > 1:1079595/1‑150 (MQ=255) cTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTaa < 1:1005676/150‑1 (MQ=255) gACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAgg > 1:163908/1‑150 (MQ=255) | GTCTGGTTATCGGTGGCGTGAACCTGGTCAAGCGTCATACCAAGCCTAACCCGATGGCGGGCGTACAGGGCGGTATCGTCGAGAAAGAAGCGCCTCTGCACGCTTCCAACGTTGCCATCTTCAACGGTGAAACCAACAAGGCTGACCGCGTTGGTTTCAAAGTAGAAGACGGTAAAAAAATTCGTGTCTTCAAGTCGACCCAAAAAGCGGTTGATGCTTGAACACTGCTAGGTAGAAGACCATGGCACGACTGAAAGAGATTTACCGGAACGAAATCGCTCCTAAGCTTAAGG > NC_002947/556161‑556453 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |