New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1380493 =	43 (0.880)	3 (0.070)	3/226	NT	8.0%	intergenic (‑213/+49)	PP_1202/PP_t67	phospholipids modification protein/tRNA‑Met
	?	NC_002947	1380532 =	30 (0.680)					intergenic (‑252/+10)	PP_1202/PP_t67	phospholipids modification protein/tRNA‑Met

CAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGAC  >  NC_002947/1380392‑1380681                                                                                                                                               |                                                                                                                                                      gaatccgccccactgacgcgggatggagcagcctggtagctcgtcgggctcataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagaacaaaccccgcgctgcttttacacaggcggggtttgttCTGACGaa                                                                                                                                                <  1:778270‑M2/8‑1 (MQ=255)     gTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGCCGAATATGGt                                                                                                                                          >  2:255716/1‑150 (MQ=255)      ttAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGtt                                                                                                                                         <  2:57365/150‑1 (MQ=255)      ttAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGtt                                                                                                                                         >  1:501935/1‑150 (MQ=255)         aaGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCg                                                                                                                                      <  2:501935/150‑1 (MQ=255)                ttCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCg                                                                                                                               >  1:837788/1‑150 (MQ=255)                    tCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGAtt                                                                                                                           <  2:104807/150‑1 (MQ=255)                         ggCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAAc                                                                                                                      <  1:1052403/150‑1 (MQ=255)                          gCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAAcc                                                                                                                     <  2:837788/150‑1 (MQ=255)                              gACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACcgacg                                                                                                                 >  1:61815/1‑150 (MQ=255)                                      aaGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCgg                                                                                                         <  1:475399/150‑1 (MQ=255)                                        gCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGt                                                                                                       <  1:370625/150‑1 (MQ=255)                                          cggCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTa                                                                                                     >  1:506025/3‑150 (MQ=255)                                           tGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTAt                                                                                                    >  1:912214/1‑150 (MQ=255)                                                    gCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACGAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgac                                                                                           <  2:1016171/150‑1 (MQ=255)                                                     cATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgacg                                                                                          >  2:433123/1‑150 (MQ=255)                                                      aTGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGAATACAGCAACAAACACCGGGCTGCTTTTACA‑CAG‑GCGGGGTTTGATGAGACGAATAGGGTTGCGGGGGCCGGATTTGAACCGACAACTTTAGGGTTATGAGCCcgacgt                                                                                         >  1:215703/1‑149 (MQ=255)                                                                        gAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAAAcga                                                                                                                   <  2:793230/106‑1 (MQ=255)                                                                        gAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAAAcga                                                                                                                   >  1:793230/1‑106 (MQ=255)                                                                                       aGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTgggg                                                        >  1:1072529/1‑150 (MQ=255)                                                                                        gggAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGc                                                       <  1:822414/150‑1 (MQ=255)                                                                                           aGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGc                                                       <  1:1024058/147‑1 (MQ=255)                                                                                           aGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGc                                                       >  2:1024058/1‑147 (MQ=255)                                                                                              ttcgtcagAACAAACCCCGC‑CTG‑TGTAAAAGCAGCGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTc                                                 <  1:778270‑M1/142‑1 (MQ=255)                                                                                               ataAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCt                                                <  1:484605/150‑1 (MQ=255)                                                                                                taAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCTGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAgg                                                                                <  2:956272/117‑1 (MQ=255)                                                                                                taAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCTGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAgg                                                                                >  1:956272/1‑117 (MQ=255)                                                                                                taAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAg                                                                                 >  1:934111/1‑116 (MQ=255)                                                                                                taAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAg                                                                                 <  2:934111/116‑1 (MQ=255)                                                                                                taAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTTGGGCGGATTCTa                                               <  2:506025/150‑1 (MQ=255)                                                                                                   aGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAg                                            <  2:1072529/150‑1 (MQ=255)                                                                                                      AACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTTTATCACGCGTCAGTGGGGCGGATTCTACAgtgt                                         >  1:303490‑M1/1‑150 (MQ=255)                                                                                                       ACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgac                                                                                           >  2:591758‑M1/1‑99 (MQ=255)                                                                                                       ACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgac                                                                                           <  1:591758‑M1/99‑1 (MQ=255)                                                                                                          caaaccccgcctgtgtaaaagcagcgcggggtttgttCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGtt                                                                                                      >  1:382838‑M2/38‑87 (MQ=255)                                                                                                          caaaccccgcctgtgtaaaagcagcgcggggtttgttCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGtt                                                                                                      <  2:382838‑M2/50‑1 (MQ=255)                                                                                                          AACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTgg                                     >  1:1035789‑M1/1‑150 (MQ=255)                                                                                                             CCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGttt                                  <  1:694451‑M1/150‑1 (MQ=255)                                                                                                                       ttttACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCAGCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAg                        >  1:281239/1‑150 (MQ=255)                                                                                                                                    cggggtttgttCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCttt             <  2:778270‑M2/139‑1 (MQ=255)                                                                                                                                      gggtttgttCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGa           <  1:433123‑M2/141‑1 (MQ=255)                                                                                                                                             ttCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAgt                                           >  2:686995‑M2/3‑111 (MQ=255)                                                                                                                                             ttCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAgt                                           <  1:686995‑M2/109‑1 (MQ=255)                                                                                                                                               cTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGAc  <  2:912214/150‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                      CAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACA‑CAG‑GCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGAC  >  NC_002947/1380392‑1380681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.