New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1534637 =55 (1.120)3 (0.060) 3/238 NT 5.2% coding (2606/2820 nt) secA protein translocase subunit SecA
?NC_002947 1534671 = 57 (1.220)coding (2640/2820 nt) secA protein translocase subunit SecA

CAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAATGACCAGAAGCTGGGCCGCAACGAGCCGTGCTGGTGT  >  NC_002947/1534524‑1534806
                                                                                                                                                    |                                                                                                                                       
cccagcttctcgtcattgcttactggcgccgaggataccgctacttcggcaccctcctcgctcagttgctcgcttcccaggcccggtgcagcggcgtgctggaacttcatgcgaCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTc                                                                                                                                        >  2:182283‑M1/115‑150 (MQ=255)
          tCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTc                                                                                                                                        >  2:919429/1‑139 (MQ=255)
          tCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTc                                                                                                                                        <  1:919429/139‑1 (MQ=255)
               cAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACAAGGCCGCAGATCTAAACTGCAGTCGCGTCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCa                                                                                                                        >  1:927205/1‑150 (MQ=255)
                 gCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCAcg                                                                                                                      >  2:1214009/1‑150 (MQ=255)
                 gCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCAcg                                                                                                                      >  2:814890/1‑150 (MQ=255)
                      ttCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCt                                                                                                                 <  1:814890/150‑1 (MQ=255)
                        ccAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAg                                                                                                                          >  2:592782/1‑139 (MQ=255)
                        ccAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAg                                                                                                                          <  1:592782/139‑1 (MQ=255)
                           ggAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCAcc                                                                                                            >  2:895335/1‑150 (MQ=255)
                                     gAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATACAGTTCCAGCACGCCGCTGCACCGGGCCTGGGa                                                                                                  <  2:570949/150‑1 (MQ=255)
                                      aGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGaa                                                                                                 <  1:895335/150‑1 (MQ=255)
                                        tCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATg                                                                                                                                   >  2:718752/1‑114 (MQ=255)
                                        tCGATCAAGCGAGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATg                                                                                                                                   <  1:718752/114‑1 (MQ=255)
                                          gATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCg                                                                                              >  1:1122190/1‑149 (MQ=255)
                                          gATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCg                                                                                              <  2:1122190/149‑1 (MQ=255)
                                          gATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGa                                                                                             >  1:869694/1‑150 (MQ=255)
                                          gATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGa                                                                                             >  2:173461/1‑150 (MQ=255)
                                             cAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCAt                                                                                                                                    <  2:889846/108‑1 (MQ=255)
                                             cAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCAt                                                                                                                                    >  1:889846/1‑108 (MQ=255)
                                               aGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAAc                                                                                        >  2:451235/1‑150 (MQ=255)
                                                gcgcGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACt                                                                                       >  2:680335/1‑150 (MQ=255)
                                                  gcgACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGa                                                                                     <  2:129108/150‑1 (MQ=255)
                                                  gcgACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGa                                                                                     <  1:1235381/150‑1 (MQ=255)
                                                    gACACCATCCGTGTGCTGTCTCGCGTACAGGTTTGCCGCGCAGACCCGGCCGAAGAAGAAGCTCTCCTGCGCCGCGAGGCCGAAGAGCTCGCGATTTGCATTCAGTTCCAGCACGCCGCTGCACCTGTCCTTGGAGGCGAGCAACTGAGc                                                                                   >  2:1092523/1‑150 (MQ=255)
                                                    gACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGc                                                                                   >  1:57201/1‑150 (MQ=255)
                                                       acCATCCGTGTGCTGTCGCACGTACGGGGGGGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCgag                                                                                >  1:33837/1‑150 (MQ=255)
                                                       acCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCgag                                                                                <  2:57201/150‑1 (MQ=255)
                                                          aTCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCgaggag                                                                             >  2:449118/1‑150 (MQ=255)
                                                                   cTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGaa                                                                    <  1:225950/150‑1 (MQ=255)
                                                                    tGTCGCAAGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAg                                                                   >  1:544216/1‑150 (MQ=255)
                                                                      tCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTa                                                                 >  2:751690/1‑150 (MQ=255)
                                                                         cACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGaa                                                                    <  1:829398/144‑1 (MQ=255)
                                                                         cACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGaa                                                                    >  2:829398/1‑144 (MQ=255)
                                                                         cACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAACTGTGTGCAGTTCCAGCACGCCGATGAACAGCGCGTTGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCg                                                              >  1:287346/1‑150 (MQ=255)
                                                                                   ttCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCgg                                                    <  1:680335/150‑1 (MQ=255)
                                                                                    tCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGgc                                                   <  1:115269/150‑1 (MQ=255)
                                                                                          cgAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGt                                             <  1:751690/150‑1 (MQ=255)
                                                                                                cccGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTgg                                                                                                    <  2:739546/89‑1 (MQ=255)
                                                                                                cccGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTgg                                                                                                    >  1:739546/1‑89 (MQ=255)
                                                                                                 ccGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAAt                                      >  1:787817/1‑150 (MQ=255)
                                                                                                 ccGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAAt                                      >  2:683452/1‑150 (MQ=255)
                                                                                                 ccGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAAt                                      <  2:130698/150‑1 (MQ=255)
                                                                                                   ggCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAATGa                                    <  1:1214009/150‑1 (MQ=255)
                                                                                                    gCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAATGAc                                   <  1:1044846/150‑1 (MQ=255)
                                                                                                    gCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCAGTAGCCTCGGCGCCAGTACGCAATGAc                                   <  1:173461/150‑1 (MQ=255)
                                                                                                       gaagaagaaGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTa                                            >  1:1153771/1‑138 (MQ=255)
                                                                                                       gaagaagaaGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTa                                            <  2:1153771/138‑1 (MQ=255)
                                                                                                       gaagaagaaGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAATGACCAg                                >  2:828562/1‑150 (MQ=255)
                                                                                                          gaagaagCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAATGACCAGAAg                             >  1:35331/1‑150 (MQ=255)
                                                                                                             agaagCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTTGGCGCCAGTACGCAATGACCAGAAGCt                           <  1:1112677/150‑1 (MQ=255)
                                                                                                              gaagCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAATGACCAGAAGCTg                          >  2:773027/1‑150 (MQ=255)
                                                                                                                gactcgccagctcttcggcctcgcggcgcaggcgagTCGCATGAAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTATCCTCGGCGCCAGTAAGCAATGACGAGAAGCTggg                        >  2:182283‑M2/37‑150 (MQ=255)
                                                                                                                 gCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAg                                                                                    >  1:675087/1‑89 (MQ=255)
                                                                                                                 gCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAg                                                                                    <  2:675087/89‑1 (MQ=255)
                                                                                                                 gCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAATGACCAGAAGCTGGGc                       >  1:1056735/1‑150 (MQ=255)
                                                                                                                   tcgccagctcttcggcctcgcggcgcaggcgagTCGCATGCAGTTc                                                                                                                             >  2:1049781‑M2/34‑46 (MQ=255)
                                                                                                                   tcgccagctcttcggcctcgcggcgcaggcgagTCGCATGCAGTTc                                                                                                                             <  1:1049781‑M2/13‑1 (MQ=255)
                                                                                                                   TCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAATGACCAGAAGCTGGGCCg                     <  2:1165725‑M1/150‑1 (MQ=255)
                                                                                                                              gcgAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAATGACCAGAAGCTGGGCCGCAACGAGCCGt          <  1:451235/150‑1 (MQ=255)
                                                                                                                              gcgAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAATGACCAGAAGCTGGGCCGCAACGAGCCGt          <  2:544216/150‑1 (MQ=255)
                                                                                                                                      gAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGaa                                                                    <  1:507703/84‑1 (MQ=255)
                                                                                                                                      gAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGaa                                                                    >  2:507703/1‑84 (MQ=255)
                                                                                                                                      gAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAATGACCAGAAGCTGGGCCGCAACGAGCCGTGCTGgtgt  >  1:267485/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                       
CAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAATGACCAGAAGCTGGGCCGCAACGAGCCGTGCTGGTGT  >  NC_002947/1534524‑1534806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.