| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3388268 | 32 (0.650) | 4 (0.090) | 4/238 | NT | 11.5% | coding (74/480 nt) | PP_2990 | MerR family transcriptional regulator |
| ? | NC_002947 | = 3388288 | 31 (0.660) | coding (94/480 nt) | PP_2990 | MerR family transcriptional regulator | |||||
TTCAGGTTTAAAGTCAACTTTAAGGTCAATAGGTTTTTCAGGGTGAGGTATGAGAATAGGTGAACTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAGCGCACAGGCGGCAGGTTTTTCTTTGGAGGAGATCCGGCAATTGATGCCGATGGACGCCAGTGGCTGGCGGCACGACGAGTTGCT > NC_002947/3388146‑3388433 | ttCAGGTTTAAAGTCAACTTTAAGGTCAATAGGTTTTTCAGGGTGAGGTATGAGAATAGGTGAACTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCaa > 2:808397/1‑150 (MQ=255) cAGGTTTAAAGTCAACTTTAAGGTCAATAGGTTTTTCAGGGTGAGGTATGAGAATAGGTGAACTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCAAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATg < 2:1188109/150‑1 (MQ=255) ttAAAGTCAACTTTAAGGTCAATAGGTTTTTCAGGGTGAGGTATGAGAATAGGTGAACTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATTGATAc > 1:1213817/1‑150 (MQ=255) ttAAAGTCAACTTTAAGGTCAATAGGTTTTTCAGGGTGAGGTATGAGAATAGGTGAACTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATAc < 1:808397/150‑1 (MQ=255) aaGTCAACTTTAAGGTCAATAGGTTTTTCAGGGTGAGGTATGAGAATAGGTGAACTGGCAAAAATCTGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGAAACCga < 2:960267/150‑2 (MQ=255) aaGTCAACTTTAAGGTCAATAGGTTTTTCAGGGTGAGGTATGAGAATAGGTGAACTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCgg < 1:822849/150‑1 (MQ=255) tCAACTTTAAGGTCAATAGGTTTTTCAGGGTGAGGTATGAGAATAGGTGAACTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGAc > 1:568695/1‑150 (MQ=255) tttAAGGTCAATAGGTTTTTCAGGGTGAGGTATGAGAATAGGTGAACTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATAACAAAACTATgc > 2:91795/1‑150 (MQ=255) aTAGGTTTTTCAGGGTGAGGTATGAGAATAGGTGAACTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATa > 1:808241/1‑128 (MQ=255) aTAGGTTTTTCAGGGTGAGGTATGAGAATAGGTGAACTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATa < 2:808241/128‑1 (MQ=255) tAGGTTTTTCAGGGTGAGGTATGAGAATAGGTGAACTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCg > 1:74087/1‑150 (MQ=255) gAGGTATGAGAATAGGTGAACTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAAc < 1:1258355/150‑1 (MQ=255) ggTATGAGAATAGGTGAACTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCATGTAGAACTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACtt > 1:1185789/1‑150 (MQ=255) aTGAGAATAGGTGAACTGGCAAAAATCAGTGGACTGGCACCCTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTtatg < 2:878422/150‑2 (MQ=255) tAGGTGAACTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAgcg < 2:74087/150‑1 (MQ=255) gTGAACTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAGCGcac > 1:636163/1‑150 (MQ=255) cTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTACAACTTATAACCAGCGCACAggcg < 2:893708/150‑1 (MQ=255) cAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAGCGCACAGGCGGCAg < 1:877893/150‑1 (MQ=255) aGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAGCGCACAGGCGGCAGGTTTTTCt < 1:35164/150‑1 (MQ=255) tGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGtg < 2:917708/104‑1 (MQ=255) tGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGtg > 1:917708/1‑104 (MQ=255) cGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAGCGCACAGGCGGCAGGTTTTTCTTTGGAGGAGATCCGGCaa > 2:956048/1‑150 (MQ=255) gCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAaggccactggcctcatagaatcgaatgcgtgacggtgccagtccactgatttttgccagttcacctattctcatac < 2:185986‑M2/124‑77 (MQ=255) gCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAaggccactggcctcatagaatcgaatgcgtgacggtgccagtccactgatttttgccagttcacctattctcatac > 1:185986‑M2/1‑48 (MQ=255) cATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGtgct < 2:328835/93‑1 (MQ=255) cATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGtgct > 1:328835/1‑93 (MQ=255) aTTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAaggccactggcctcatagaatcgaatgcgtgacggtgccagtccactgattttt > 2:1162527‑M2/1‑46 (MQ=255) aTTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAaggccactggcctcatagaatcgaatgcgtgacggtgccagtccactgattttt < 1:1162527‑M2/100‑55 (MQ=255) aTTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATgcgc > 1:1001837/1‑73 (MQ=255) aTTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATgcgc < 2:1001837/73‑1 (MQ=255) gATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAGCGCACAGGCGGCAGGTTTTTCTTTGGAGGAGATCCGGCAATTGATGc > 2:283051/1‑150 (MQ=255) ccAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATTGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAGCGCACAGGCGGCAGGTTTTTCTTTGGAGGAGATCCGGCAATTGATGCCGATGGACGCCa < 2:1213817/150‑1 (MQ=255) ccAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAGCGCACAGGCGGCAGGTTTTTCTTTgga > 2:917756/1‑118 (MQ=255) ccAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAGCGCACAGGCGGCAGGTTTTTCTTTgga < 1:917756/118‑1 (MQ=255) gTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAGCGCACAGGCTGCAGGTTTTTCTTTGGAGGAGATCCGGCAATTGATGCCGATGGACGCCAGtg < 1:91795/150‑1 (MQ=255) tCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAGCGCACAGGCGGCAGGTTTTTCTTTGGAGGAGATCCGGCAATTGATGCCGATGGACGCCAGTGGCTGGCGGCacgac < 1:955739/150‑1 (MQ=255) tCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAGCGCACAGGCGGCAGGTTTTTCTTTGGAGGAGATCCGGCAATTGATGCCGATGGACGCCAGTGGCTGGCGGCacgac > 1:95437/1‑150 (MQ=255) gcgcAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAGCGCACAGGCGGCAGGTTTTTCTTTGGAGGAGATCCGGCAATTGATGCCGATGGACGCCAGTGGCTGGCGGCACGACGAGTTGCt < 1:956048/150‑1 (MQ=255) cgcAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAGCGCACAGGCGGCAGGTTTTTCTTTGGAGGAGATCCGGCAATTGATGCCGATGGACGCCAGtggctggc < 2:1117102/133‑1 (MQ=255) cgcAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAGCGCACAGGCGGCAGGTTTTTCTTTGGAGGAGATCCGGCAATTGATGCCGATGGACGCCAGtggctggc > 1:1117102/1‑133 (MQ=255) | TTCAGGTTTAAAGTCAACTTTAAGGTCAATAGGTTTTTCAGGGTGAGGTATGAGAATAGGTGAACTGGCAAAAATCAGTGGACTGGCACCGTCACGCATTCGATTCTATGAGGCCAGTGGCCTGATCAGCTCCGTCGAGCGCAAGGCCAATGGATACCGGGACTATGCGCCTGATACCGAATGGGTGCTGCAACTTATAACCAGCGCACAGGCGGCAGGTTTTTCTTTGGAGGAGATCCGGCAATTGATGCCGATGGACGCCAGTGGCTGGCGGCACGACGAGTTGCT > NC_002947/3388146‑3388433 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |