New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5280967	34 (0.690)	8 (0.200)	7/200	NT	20.5%	intergenic (+52/+86)	trmA/pcaG	tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA/protocatechuate 3,4‑dioxygenase subunit alpha
	?	NC_002947	= 5281003	35 (0.890)					intergenic (+88/+50)	trmA/pcaG	tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA/protocatechuate 3,4‑dioxygenase subunit alpha

TTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAGGTT  >  NC_002947/5280857‑5281152                                                                                                                                                   |                                                                                                                                                      ttGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAgga                                                                                                                                                    >  1:482863‑M2/1‑147 (MQ=255)   gACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAggagc                                                                                                                                                  <  1:95806‑M2/150‑6 (MQ=255)      cAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCTATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAggagcggg                                                                                                                                               >  2:922621‑M2/1‑142 (MQ=255)      cAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAggagcggg                                                                                                                                               <  2:128527‑M2/150‑9 (MQ=255)      cAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAggagcggg                                                                                                                                               <  2:380091‑M2/150‑9 (MQ=255)      cAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAggagcggg                                                                                                                                               <  1:830181‑M2/150‑9 (MQ=255)                      accaTATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAggagcgggcttgcccgcgaatggg                                                                                                                               >  2:697417‑M2/1‑126 (MQ=255)                        caTATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGcc                                                                                                                             >  1:1251943/1‑150 (MQ=255)                         atatGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCg                                                                                                                            >  1:604789/1‑150 (MQ=255)                           atGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCa                                                                                                                          <  2:830181/150‑1 (MQ=255)                                           tgctgGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGAGCGGCGTCGGTGTACGCAGATCGTTGTACAAGCGAGCTTGCCCGCGAGTGGGCGGCAGAGCGGCCCCAAGCtt                                                                                                          >  1:408987/1‑150 (MQ=39)                                            gctgGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTc                                                                                                         <  2:1251943/150‑1 (MQ=255)                                                gTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGGAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATTGGCCGCAGAGCGGCCCCAAGCTTCACCt                                                                                                     >  2:47559/1‑150 (MQ=255)                                                   cGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAg                                                                                                  <  2:516241/150‑1 (MQ=255)                                                    ggCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGa                                                                                                 >  1:233722/1‑150 (MQ=255)                                                     gcgcTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGaa                                                                                                <  1:822210/150‑1 (MQ=255)                                                     gcgcTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGaa                                                                                                <  2:1224419/150‑1 (MQ=255)                                                        cTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTc                                                                                             >  1:229686/1‑150 (MQ=255)                                                           ttCGTTGTGTTGCCGGGGCTACTGGGCAGCCCATTCGCGGGCAAGCTCTCTCCGACATTGATCGGCGTCGGTGTACGGGGATCCTTGTAGGAGCCGGCTTGCCCGCAAATGCGCCGCAGCGCGGCCCCAAGCTTCACCTCAGAAGTCgaa                                                                                          <  1:941993/149‑1 (MQ=255)                                                           aTCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCgaa                                                                                          >  2:923914/1‑150 (MQ=255)                                                              gTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCgaagaa                                                                                       >  1:497984/1‑150 (MQ=255)                                                               ttGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGaagaag                                                                                      >  2:379572/1‑150 (MQ=255)                                                               ttGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGaagaag                                                                                      >  2:460861/1‑150 (MQ=255)                                                                  tATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACg                                                                                   <  1:460861/150‑1 (MQ=255)                                                                   aTTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACgg                                                                                  <  2:831649/150‑1 (MQ=255)                                                                     gcttggggccgcTCTGCGGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAg                                                                                                                                                      >  1:910741‑M2/5‑79 (MQ=255)                                                                     gcttggggccgcTCTGCGGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAg                                                                                                                                                      <  2:910741‑M2/76‑2 (MQ=255)                                                                          gggCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCa                                                                                                   <  1:994909/126‑1 (MQ=255)                                                                          gggCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCa                                                                                                   >  2:994909/1‑126 (MQ=255)                                                                            gctgctTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCa                                                                                                   <  1:428843/124‑1 (MQ=255)                                                                            gctgctTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCa                                                                                                   >  2:428843/1‑124 (MQ=255)                                                                            gctgctTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCtt                                                                         >  2:333454/1‑150 (MQ=255)                                                                             ctgctTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTc                                                                        >  1:699788/1‑150 (MQ=255)                                                                                 tttGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAggagcggg                                                                                                                                               >  2:116046‑M2/1‑67 (MQ=255)                                                                                 tttGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAggagcggg                                                                                                                                               <  1:116046‑M2/75‑9 (MQ=255)                                                                                           aTTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGa                                                          <  1:204968/150‑1 (MQ=255)                                                                                              cgcgGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGatat                                                       <  2:229686/150‑1 (MQ=255)                                                                                              cgcgGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGatat                                                       <  2:95806/150‑1 (MQ=255)                                                                                                   gCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAggagcgggcttgcccgcgaatgggctgcaaagcagccccggcaatacaacgatcagcgccgaaccagcagaaccccactctccatatggtgggtatacggg                                                  <  2:733389‑M2/150‑102 (MQ=255)                                                                                                   gCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAg                                                  <  2:699788/150‑1 (MQ=255)                                                                                                          cGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAggagcgggcttgcccgcgaatgggc                                                                                                                              >  2:547828‑M2/1‑42 (MQ=255)                                                                                                          cGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAggagcgggcttgcccgcgaatgggc                                                                                                                              <  1:547828‑M2/67‑26 (MQ=255)                                                                                                             tCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAggagcgggcttgcccgcgaatgggctgcaaagcagccccggcaatacaa                                                                                                      <  2:719832‑M2/88‑50 (MQ=255)                                                                                                             tCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAggagcgggcttgcccgcgaatgggctgcaaagcagccccggcaatacaa                                                                                                      >  1:719832‑M2/1‑39 (MQ=255)                                                                                                               cGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAggagcgggcttgcccgcgaatgggctgcaaagcagccccggcaatacaacgatcagcgccgaaccag                                                                                    >  1:359742‑M2/1‑37 (MQ=255)                                                                                                               cGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAggagcgggcttgcccgcgaatgggctgcaaagcagccccggcaatacaacgatcagcgccgaaccag                                                                                    <  2:359742‑M2/104‑68 (MQ=255)                                                                                                               cGACATTGATCGGCGTCGGTGTACGCAGATCAATGTCggagcgggcttgcccgcgaatgggctgcaaagcagccccggcaatacaacgatcagcgccgaaccagcagaaccccactctccatatggtgggtatacgggaac                                               <  1:751595‑M2/141‑105 (MQ=255)                                                                                                               cGACATTGATCGGCGTCGGTGTACGCAGATCAATGTCggagcgggcttgcccgcgaatgggctgcaaagcagccccggcaatacaacgatcagcgccgaaccagcagaaccccactctccatatggtgggtatacgggaac                                               >  2:751595‑M2/1‑37 (MQ=255)                                                                                                                  cATTGATCGGCGTCGGTGTACGCAGATCGTTGTAggagcgggcttgcccgcgaatgggctgcaaagcagccccggcaatacaacgatcagcgccgaaccagcagaaccccactctccatatggtgggtatacgggaactggtcaaacaat                                   >  1:733389‑M2/1‑34 (MQ=255)                                                                                                                    ttGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTccc                                 <  1:380091/150‑1 (MQ=255)                                                                                                                    ttGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTccc                                 >  2:758981/1‑150 (MQ=255)                                                                                                                      gATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCAt                               >  1:1052583/1‑150 (MQ=255)                                                                                                                      gATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCAt                               >  1:182200/1‑150 (MQ=255)                                                                                                                                      cGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCtt               >  1:405588/1‑150 (MQ=255)                                                                                                                                       gCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTg              <  2:536920/150‑1 (MQ=255)                                                                                                                                       gCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTg              <  2:408987/150‑1 (MQ=255)                                                                                                                                        cAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTgg             <  2:233722/150‑1 (MQ=255)                                                                                                                                           aTCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGc                                                 <  2:513885/111‑1 (MQ=255)                                                                                                                                           aTCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGc                                                 >  1:513885/1‑111 (MQ=255)                                                                                                                                                tGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAg     <  2:405588/150‑1 (MQ=255)                                                                                                                                                 gTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAgg    >  2:753100/1‑150 (MQ=255)                                                                                                                                                 gTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAgg    >  1:552694/1‑150 (MQ=255)                                                                                                                                                 gTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCATCCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAgg    >  2:884562/1‑150 (MQ=255)                                                                                                                                                   aGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTGTTCCCATTCTCTTCGCAACGGTTGGCAATCAAGGtt  >  2:597097/1‑150 (MQ=255)                                                                                                                                                   aGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATc                              <  2:819580/122‑1 (MQ=255)                                                                                                                                                   aGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATc                              >  1:819580/1‑122 (MQ=255)                                                                                                                                                   |                                                                                                                                                      TTGACCAGTTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAGGTT  >  NC_002947/5280857‑5281152

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.