New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5627662	49 (1.000)	3 (0.060)	3/238	NT	5.0%	intergenic (‑110/+83)	PP_4944/rlmJ	carbamoyltransferase/23S rRNA (adenine(2030)‑N(6))‑methyltransferase
	?	NC_002947	= 5627735	67 (1.440)					intergenic (‑183/+10)	PP_4944/rlmJ	carbamoyltransferase/23S rRNA (adenine(2030)‑N(6))‑methyltransferase

GCGGCCTCTTGGGCGGATGGCGGCTAAAGGGCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGAGTTCATCCTCCAGCCCCCATGGTGGGTTGGCAATGGCCAAGCCCGAACCATTC  >  NC_002947/5627587‑5627880                                                                                                                                                     |                                                                                                                                                    gCGGCCTCTTGGGCGGATGGCGGCTAAAGGGCGTGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGc                                                                                                                                                    >  1:866279‑M2/1‑149 (MQ=255)    gCCTCTTGGGCGGATGGCGGCTAAAGGGCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGccta                                                                                                                                                 <  1:775856‑M2/150‑5 (MQ=255)       tctTGGGCGGATGGCGGCTAAAGGGCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAg                                                                                                                                              >  2:14809/1‑150 (MQ=255)       tctTGGGCGGATGGCGGCTAAAGGGCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAg                                                                                                                                              <  1:488523/150‑1 (MQ=255)        ctTGGGCGGATGGCGGCTAAAGGGCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAgg                                                                                                                                             >  1:1057775/1‑150 (MQ=255)              cGGATGGCGGCTAAAGGGCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACt                                                                                                                                      <  1:447262/150‑1 (MQ=255)              cGGATGGCGGCTAAAGGGCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACt                                                                                                                                      <  1:434955/150‑1 (MQ=255)                       gcTAAAGGCCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCa                                                                                                                             <  2:229670/150‑1 (MQ=255)                        cTAAAGGGCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAg                                                                                                                            >  1:258643/1‑150 (MQ=255)                                   gATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCAACCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGc                                                                                                                >  2:1139054/1‑150 (MQ=255)                                      tataACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGt                                                                                                             >  2:732288/1‑150 (MQ=255)                                        taACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTaa                                                                                                           <  2:1057775/150‑1 (MQ=255)                                            gCAAACATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGGTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTAc                                                                                                       >  2:1275578/1‑150 (MQ=255)                                              aaaCATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACcg                                                                                                     <  2:1223647/150‑1 (MQ=255)                                              aaaCATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACcg                                                                                                     >  1:267055/1‑150 (MQ=255)                                                   ttGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGt                                                                                                >  1:1059184/1‑150 (MQ=255)                                                       aGGCACCCCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGTTCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCtgt                                                                                            <  2:57538/150‑1 (MQ=255)                                                         gCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGc                                                                                          >  2:1132343/1‑150 (MQ=255)                                                         gCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGc                                                                                          >  2:520578/1‑150 (MQ=255)                                                         gCACACCGCCCCCTTGGAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTATGTGc                                                                                          <  2:120912/150‑1 (MQ=255)                                                           acacCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCa                                                                                        >  2:817690/1‑150 (MQ=255)                                                           acacCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCa                                                                                        >  1:1210809/1‑150 (MQ=255)                                                              ccGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCCACAGGC‑t                                                                                                                                          >  1:583721/1‑98 (MQ=255)                                                              ccGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCCACAGGC‑t                                                                                                                                          <  2:583721/98‑1 (MQ=255)                                                                gCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTAGGCGAGCAGCCATT‑CCAGTTGGTAACTACCGGCGGTCTGTGACCGctct                                                                                   >  2:1175005/1‑150 (MQ=37)                                                                  ccccTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCttt                                                                                 <  1:1132343/150‑1 (MQ=255)                                                                  ccccTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCttt                                                                                 <  2:1059184/150‑1 (MQ=255)                                                                         tAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGgccagc                                                                          <  1:14809/150‑1 (MQ=255)                                                                           ggggCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGcctacaagggggcggtgtgcctccaatgtttgcgttataatcccgccctttagccgccatccgcccaagaggccg                                                                          <  1:113974‑M2/150‑76 (MQ=255)                                                                            tcgCGGGTGAACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGt                                                                                                >  1:567378/3‑125 (MQ=255)                                                                            gggCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCAt                                                                       >  1:1093221/1‑150 (MQ=255)                                                                              gCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCtgt                                                                                            <  1:1225232/127‑1 (MQ=255)                                                                              gCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCtgt                                                                                            >  2:1225232/1‑127 (MQ=255)                                                                                gggTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGgca                                                                   <  2:258643/150‑1 (MQ=255)                                                                                 ggTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTATCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGgcag                                                                  >  1:1062178/1‑150 (MQ=255)                                                                                 ggTTCACCCGAGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGgcag                                                                  <  1:254060/150‑1 (MQ=255)                                                                                   ttCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGcctacaagggggcggtgtgcctccaatgtttgcgttataatcccgccctttagccgccatccgcccaagaggccgctggcgca                                                                  <  2:1254908‑M2/150‑84 (MQ=255)                                                                                   ttCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGgcagca                                                                <  1:1275578/150‑1 (MQ=255)                                                                                     cACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCagcagc                                                              <  2:267055/150‑1 (MQ=255)                                                                                     cACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCagcagc                                                              <  2:775856/150‑1 (MQ=255)                                                                                      aCCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGgcagc                                                                 <  2:668897/146‑1 (MQ=255)                                                                                      aCCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGgcagc                                                                 >  1:668897/1‑146 (MQ=255)                                                                                      aCCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCt                                                             >  2:238362/1‑150 (MQ=255)                                                                                       cccGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCttt                                                                                 <  2:1106542/129‑1 (MQ=255)                                                                                       cccGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCttt                                                                                 >  1:1106542/1‑129 (MQ=255)                                                                                        ccGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTcc                                                           >  2:636887/1‑150 (MQ=255)                                                                                        ccGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCCATGTGAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGcagcagagat                                                           >  1:674227/1‑146 (MQ=255)                                                                                            gAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGa                                                       <  2:1093221/150‑1 (MQ=255)                                                                                            gAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGa                                                       >  2:22036/1‑150 (MQ=255)                                                                                             aaGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGcctacaagggggcggtgtgcctccaatgtttgcgttataatcccgccctttagccgccatccgcccaagaggccgctggcgcatttttaccga                                                        >  2:113974‑M2/1‑57 (MQ=255)                                                                                              aGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGAGt                                                     <  1:636887/150‑1 (MQ=255)                                                                                                   gCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGAGTTCAtc                                                <  2:388915/150‑1 (MQ=255)                                                                                                   gCAACGCGGTGGATCATACCGGCGTAGCCGGTGTTCGCGGGCAAACCAGCGACTCCAGGCGTTGCT‑GGCCAGCAGCCCCA‑CCCTGCGGTAACTACCGGCGGTCTGTGCAAGATCTTTGGCCAGCCATGGCAGCAGCTCCTTGAGTTCAtc                                                <  1:732288/150‑1 (MQ=255)                                                                                                    cAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCttt                                                                                 >  2:557279/1‑116 (MQ=255)                                                                                                    cAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCttt                                                                                 <  1:557279/116‑1 (MQ=255)                                                                                                      aCGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGAGTTCAtcctc                                             <  1:360623/150‑1 (MQ=255)                                                                                                          ggTGGACGGCACCGGCGTAGCCGGTGATCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCATTGAGTACAtcataccgc                                         >  2:396217/1‑143 (MQ=255)                                                                                                                tGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGATTTCATCCTCCAGCCCCCAt                                   >  1:346359/1‑150 (MQ=255)                                                                                                                       gccGTAGCCGGTGTTCGCGGTCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCGGCCAGTGCCCTG‑GAAGTCGACCGGCCGCCTGTGCCCGCTATATAGCCACCATTGGCAGTAGCCCCTTGAGTTCATCCTCCAGCCCCCATGGTGGGt                            <  1:611192/148‑1 (MQ=255)                                                                                                                        gCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGAGTTCATCCTCCATCCCCCATGGTGGGtt                           <  1:1139054/150‑1 (MQ=255)                                                                                                                         cGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGAGTTCATCCTCCAGCCCCCATGGTGGGTTg                          <  2:1210809/150‑1 (MQ=255)                                                                                                                         cGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGAGTTCATCCTCCAGCCCCCATGGTGGGTTg                          <  2:1181574/150‑1 (MQ=255)                                                                                                                           tAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGATTTCATCCTCCAGCCCCCATGGTGGGTTGGc                        <  2:346359/150‑1 (MQ=255)                                                                                                                               cGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGAGTTCATCCTCCAGCCCCCATGGTGGGTTGGCAATg                    >  1:1272003/1‑150 (MQ=255)                                                                                                                               cGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGAGTTCATCCTCCAGCCCCCATGGTGGGTTGGCAATg                    >  1:1272880/1‑150 (MQ=255)                                                                                                                                ggTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGAGTTCATCCTCCAGCCCCCATGGTGGGTTGGCAATgg                   <  1:238362/150‑1 (MQ=255)                                                                                                                                ggTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGAGTTCATCCTCCAGCCCCCATGGTGGGTTGGCAATgg                   >  1:10654/1‑150 (MQ=255)                                                                                                                                  tgtTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGc                                                                                                                           <  2:197683/45‑1 (MQ=255)                                                                                                                                  tgtTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGc                                                                                                                           >  1:197683/1‑45 (MQ=255)                                                                                                                                      cgcgGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGAGTTCATCCTCCAGCCCCCATGGTGGGTTGGCAATGGCCAAGc             <  1:817690/150‑1 (MQ=255)                                                                                                                                       gcgGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGctct                                                                                   <  1:1101738/79‑1 (MQ=255)                                                                                                                                       gcgGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGctct                                                                                   >  2:1101738/1‑79 (MQ=255)                                                                                                                                            cAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTTAGTTCATCCTCCAGCCCCCAtggt                                >  2:52810/1‑125 (MQ=255)                                                                                                                                            cAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTTAGTTCATCCTCCAGCCCCCAtggt                                <  1:52810/125‑1 (MQ=255)                                                                                                                                             aaaCCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTg                                                                                >  2:939298/1‑76 (MQ=255)                                                                                                                                             aaaCCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTg                                                                                <  1:939298/76‑1 (MQ=255)                                                                                                                                              aaCCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGAGTTCATCCTCCAGCCCCCATGGTGGGTTGGCAATGGCCAAGCCCGAACCa     <  1:520578/150‑1 (MQ=255)                                                                                                                                                 gtgcgaCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGAGTTCATCCTCCAGCCCCCATGGTGGGTTGGCAATGGCCAAGCCCGAACCATTc  >  2:342219/3‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GCGGCCTCTTGGGCGGATGGCGGCTAAAGGGCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGGGCGGGTTCACCCGCGAAGCAGGCAACGCGGTGGATGGCACCGGCGTAGCCGGTGTTCGCGGGCAAACCCGCGCCTACAGGC‑TTACTCGGCGATCAGCCAGT‑CCATGCGGTAACTACCGGCGGTCTGTGCCAGCTCTTTGGCCAGCCATGGCAGCAGCTCCTTGAGTTCATCCTCCAGCCCCCATGGTGGGTTGGCAATGGCCAAGCCCGAACCATTC  >  NC_002947/5627587‑5627880

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.