New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5735744	51 (1.040)	5 (0.110)	5/240	NT	8.9%	intergenic (‑25/+84)	hutH/hutU	histidine ammonia‑lyase/urocanate hydratase
	?	NC_002947	= 5735771	53 (1.130)					intergenic (‑52/+57)	hutH/hutU	histidine ammonia‑lyase/urocanate hydratase

GCGGCGCTGGCATCCAGTTGCAGGCGCACGGGCGCGGCATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCAGTCGATGGCGATGTCATAACCGGCATCGGCGTGACGCATGACGCCAGT  >  NC_002947/5735622‑5735920                                                                                                                                                        |                                                                                                                                                      gcggcgCTGGCATCCAGTTGCAGGCGCACGGGCGCGGCATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTgcgc                                                                                                                                                       <  2:1060694/150‑1 (MQ=255)     cgcTGGCATCCAGTTGCAGGCGCACGGGCGCGGCATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCgctc                                                                                                                                                   >  1:983147‑M2/1‑146 (MQ=255)     cgcTGGCATCCAGTTGCAGGCGCACGGGCGCGGCATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCgctc                                                                                                                                                   >  1:915929‑M2/1‑146 (MQ=255)        tGGCATCCAGTTGCAGGCGCACGGGCGCGGCATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCctt                                                                                                                                                >  2:809499/1‑150 (MQ=255)         ggCATCCAGTTGCAGGCGCACGGGCGCGGCATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCcttc                                                                                                                                               <  1:810250/150‑1 (MQ=255)           cATCCAGTTGCAGGCGCACGGGCGCGGCATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCcttctt                                                                                                                                             <  2:676327/150‑1 (MQ=255)            aTCCAGTTGCAGGCGCACGGGCGCGGCATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCttg                                                                                                                                            <  1:809499/150‑1 (MQ=255)            aTCCAGTTGCAGGCGCACGGGCGCGGCATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCttg                                                                                                                                            >  2:482457/1‑150 (MQ=255)              ccAGTTGCAGGCGCACGGGCGCGGCATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCttgtt                                                                                                                                          <  2:483617/150‑1 (MQ=255)                 gTTGCAGGCGCACGGGCGCGGCATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTgttgtt                                                                                                                                       <  1:1130918/150‑1 (MQ=255)                  ttGCAGGCGCACGGGCGCGGCATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTc                                                                                                                                      >  2:294876/1‑150 (MQ=255)                    gCAGGCGCACGGGCGCGGCATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGGTACCCACAAGCGGG‑‑CCTGCGctccacgcgatttggagta                                                                                                                                     >  1:528965‑M2/1‑131 (MQ=255)                    gCAGGCGCACGGGCGCGGCATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAg                                                                                                                                    >  2:1158805/1‑150 (MQ=255)                          gcACGGGCGCGGCATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCAc                                                                                                                              <  1:294876/150‑1 (MQ=255)                                      cATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGt                                                                                                                  <  2:367668/150‑1 (MQ=255)                                          gATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGa                                                                                                              <  1:200695/150‑1 (MQ=255)                                            tCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGCGCCGCAGG‑‑CCCGCTTGTGGGTACCCGCGAGCTCCTTCTTTTTGTTCAGTATCACCCCTTGCAGGGTGCGATc                                                                                                            <  1:731141/150‑1 (MQ=255)                                            tCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATc                                                                                                            >  1:341469/1‑150 (MQ=255)                                                gcgcAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCaaa                                                                                                        <  1:951263/150‑1 (MQ=255)                                                    aGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGCTACGTTCCTGGTTCAAATCGCGTGGAGCCGACGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCgt                                                                                                    <  1:927430/150‑1 (MQ=255)                                                      cTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCgtgg                                                                                                  <  1:1286100/150‑1 (MQ=255)                                                       tGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCgtggt                                                                                                 <  1:819026/150‑1 (MQ=255)                                                         ggCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGa                                                                                               <  1:397319/150‑1 (MQ=255)                                                          gCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGAt                                                                                                             <  1:443433/135‑1 (MQ=255)                                                          gCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGAt                                                                                                             >  2:443433/1‑135 (MQ=255)                                                               ggtcagggtGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTAAGGATACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATAAGcc                                                                                         >  1:155715/1‑150 (MQ=255)                                                                  caggctGCCAGTCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGt                                                                                      <  2:274003/150‑1 (MQ=255)                                                                        gCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGatcat                                                                                <  2:341469/150‑1 (MQ=255)                                                                         ccAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGATACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGatcatc                                                                               >  1:646327/1‑150 (MQ=255)                                                                          cAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCTGCCGGTGACCATCg                                                                              >  1:62241/1‑150 (MQ=255)                                                                             gCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTgttgtt                                                                                                                                       <  1:932908/90‑1 (MQ=255)                                                                             gCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTgttgtt                                                                                                                                       >  2:932908/1‑90 (MQ=255)                                                                             gCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCa                                                                           >  1:1212070/1‑150 (MQ=255)                                                                                                 aCGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTg                                                       <  1:1280360/150‑1 (MQ=255)                                                                                                      actactCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCa                                                  <  2:169487/150‑1 (MQ=255)                                                                                                        tactCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATc                                                                                             <  2:531319/105‑1 (MQ=255)                                                                                                        tactCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATc                                                                                             >  1:531319/1‑105 (MQ=255)                                                                                                          cgccAAATGGCGTGGAGCCGGAGG‑‑CCCGCTTGTGGGTACCTGCGCGATCCTTCTTGTTGTTCAGTATCACACCTTGCAGGAGGCGATCTAATGGGTGGTAATGATACAGGGATCATCGGCATGTACAGGTCCGGCTCATGGGCGTAGTcc                                              >  2:145481/3‑149 (MQ=255)                                                                                                           tCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCAcccc                                                                                                                           <  2:554718/72‑1 (MQ=255)                                                                                                           tCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCAcccc                                                                                                                           >  1:554718/1‑72 (MQ=255)                                                                                                             cAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCgtg                                                                                                   <  1:744505/94‑1 (MQ=255)                                                                                                             cAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCgtg                                                                                                   >  2:744505/1‑94 (MQ=255)                                                                                                              aaaTCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGa                                                                                                              >  1:795480/1‑82 (MQ=255)                                                                                                              aaaTCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGa                                                                                                              <  2:795480/82‑1 (MQ=255)                                                                                                                 tCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCgctccacgcgatttggagtagtaacgtgaccgaactcaccctcaagcctggcaccctgaccctggcccagctgcgcgcgatccatgccgcgcccgtgcgcctgcaactggat                                       <  1:735345‑M2/150‑113 (MQ=255)                                                                                                                    cgTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCgctccacgcgatttggagtagtaacgtgaccgaactcaccctcaagcctggcaccctgaccctggcccagctgcgcgctatccatgccgcgc                                                           >  1:1107145‑M2/1‑35 (MQ=255)                                                                                                                    cgTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCgctccacgcgatttggagtagtaacgtgaccgaactcaccctcaagcctggcaccctgaccctggcccagctgcgcgctatccatgccgcgc                                                           <  2:1107145‑M2/127‑93 (MQ=255)                                                                                                                    cgTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCAGTCGATGGCGATGt                                    <  1:482457/150‑1 (MQ=255)                                                                                                                     gTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCgctccacgcgatttggagtagtaacgtgaccgaactcaccctcaagcctggcaccctgaccctggcccagctgcgcgcgatccatgccgcgcccgtgcgcctgcaactggatgcca                                   <  1:101778‑M2/150‑117 (MQ=255)                                                                                                                          gCCGCAGG‑‑CCCGCTTGTGGATACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCAGTCGATGGCGATGTCATAAc                              <  2:646327/150‑1 (MQ=255)                                                                                                                                 g‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCAGTCGATGGCGATGTCATAACCGGCATc                       >  1:948956/1‑150 (MQ=255)                                                                                                                                 g‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGGCCTGGACCTGccgatg                                                        <  2:1268714/117‑6 (MQ=255)                                                                                                                                 g‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGGCCTGGACCTGccgatg                                                        >  1:1268714/1‑112 (MQ=255)                                                                                                                                     ccGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCAGTCGATGGCGATGTCATAACCGGCATCgg                     >  2:562422/1‑150 (MQ=255)                                                                                                                                        cTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCAGTCGATGGCGATGTCATAACCGGCATCGGCGt                  <  2:1212070/150‑1 (MQ=255)                                                                                                                                         ttGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGt                                                                                      <  2:186179/81‑1 (MQ=255)                                                                                                                                         ttGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGt                                                                                      >  1:186179/1‑81 (MQ=255)                                                                                                                                           gtgGGTACCTGCGCGCTCCTTCTTGTTCAACAATCCAAACGCTTCTTTCATCCGATCCTAACTGTGAGGATCAGCGGGTGGTCATCGGCAGGTCCAGGCCCTGCTCCAAGGCGCAGCCGAAGGAGATGTCATTACGCTCATCGTCGTGAc               <  2:1243306/150‑1 (MQ=255)                                                                                                                                            tgGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCAGTCGATGGCGATGTCATAACCGGCATCGGCGTGACg              >  1:1263875/1‑150 (MQ=255)                                                                                                                                               gTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCAGTCGATGGCGATGt                                    >  2:612765/1‑125 (MQ=255)                                                                                                                                               gTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCAGTCGATGGCGATGt                                    <  1:612765/125‑1 (MQ=255)                                                                                                                                                 aCCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCgtggtg                                                                                                >  1:289173/1‑63 (MQ=255)                                                                                                                                                 aCCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCgtggtg                                                                                                <  2:289173/63‑1 (MQ=255)                                                                                                                                                   cTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCAGTCGATGGCGATGTCATAACCGGCATCGGCGTGACGCATGACg       >  2:699225/1‑150 (MQ=255)                                                                                                                                                        cgcTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCAGTCGATGGCGATGTCATAACCGGCATCGGCGTGACGCATGACGCCAGt  <  2:1263875/150‑1 (MQ=255)                                                                                                                                                        |                                                                                                                                                      GCGGCGCTGGCATCCAGTTGCAGGCGCACGGGCGCGGCATGGATCGCGCGCAGCTGGGCCAGGGTCAGGGTGCCAGGCTTGAGGGTGAGTTCGGTCACGTTACTACTCCAAATCGCGTGGAGCCGCAGG‑‑CCCGCTTGTGGGTACCTGCGCGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCAGTCGATGGCGATGTCATAACCGGCATCGGCGTGACGCATGACGCCAGT  >  NC_002947/5735622‑5735920

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.