| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 12243 = | 125 (1.090) | 8 (0.070) | 7/230 | NT | 6.5% | coding (22/1104 nt) | recF | DNA replication/repair protein |
| ? | NC_002947 | 12275 = | 111 (1.030) | coding (54/1104 nt) | recF | DNA replication/repair protein | |||||
GATTCAGGCGGGTGCTGCGAAATGAACGGGCCAGCCCGAGCAAATGCACGGCTTCAAGCACGCTGGTCTTGCCGCTGCCGTTGGCGCCGTAAAGGATGTTGATGCGGGGGGAGGGTAAGAGTGTCACCGGGTGCAAGTTGCGCACCGCGGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/12396‑12243‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgacACTCTTACCCTCCCCCCGCATCAACATCCTTTACGGCGCCAACGGCAGCGGCAAGACCAGCGTGCTTGAAGCCGTGCATTTGCTCGGGCTGGCCCGTTCATTTCGCAGCACCCGCCTGAATCCGGTTATTCAGTACGAACAGGCTGCCT > NC_002947/12275‑12423 GATTCAGGCGGGTGCTGCGAAATGAACGGGCCAGCCCGAGCAAATGCACGGCTTCAAGCACGCTGGTCTTGCCGCTGCCGTTGGCGCCGTAAAGGATGTTGATGCGGGGGGAGGGTAAGAGTGTCACCGGGTGCAAGTTGCGCACCGCGG > 1:417947/1‑150 gTTCAGGCGGGGGGGGGGAAGGGAAGGGGGGAGCCCGAGCGAGGGCACGGCTTCAAGCACGCTGGTCTTGCCGCTGCCGTTGGCGCCGTAAAGGATGTTGATGCGGGGGGAGGGTAAGAGTGTCACCGGGTGCAAGTTGCGCACGGCGGT < 2:956514/149‑1 ATTCAGGCGGGTGCTGCGAAATGAACGGGCCAGCCCGAGCAAATGCACGGCTTCAAGCACGCTGGTCTTGCCGCTGCCGTTGGCGCCGTAAAGGATGTTGATGCGGGGGGAGGGTAAGAGTGTCACCGGGTGCAAGTTGCGCACCGCGGT > 1:2855536/1‑150 TCAGGCGGGTGCTGCGAAATGAACGGGCCAGCCCGAGCAAATGCACGGCTTCAAGCACGCTGGTCTTGCCGCTGCCGTTGGCGCCGTAAAGGATGTTGATGCGGGGGGAGGGTAAGAGTGTCACCGGGTGCAAGTTGCGCACCGCGGTGA < 2:2855536/150‑1 AGGCGGGTGCTGCGAAATGAACGGGCCAGTCCGAGCAAATGCACGGCTTCAAGCACGCTGGTCTTGCCGCTGCCGTTGGCGCCGTAAAGGATGTTGATGCGGGGGGAGGGTAAGAGTGTCACCGGGTGCAAGTTGCGCACCGCGGTGA > 2:1898929/1‑148 AGGCGGGTGCTGCGAAATGAACGGGCCAGTCCGAGCAAATGCACGGCTTCAAGCACGCTGGTCTTGCCGCTGCCGTTGGCGCCGTAAAGGATGTTGATGCGGGGGGAGGGTAAGAGTGTCACCGGGTGCAAGTTGCGCACCGCGGTGA < 1:1898929/148‑1 AGGCGGGTGCTGCGAAATGAACGGGCCAGCCCGAGCAAATGCACGGCTTCAAGCACGCGGGTCTTGCCGCTGCCGTTGGCGCCGTAAAGGATGTTGATGCGGGGGGAGGGTAAGAGTGTCACCGGGTGCAAGTTGCGCACCGCGGTGccc > 1:310372/1‑147 GGCGGGTGCTGCGAAATGAACGGGCCAGCCCGAGCAAATGCACGGCTTCAAGCACGCTGGTCTTGCCGCTGCCGTTGGCGCCGTAAAGGATGTTGATACGGGGGGAGGGTAAGAGTGTCACCGGGTGCAAGTTGCCCCCCGGGGTGccca > 2:315470/1‑146 CTGCGAAATGAACGGGCCAGCCCGAGCAAATGCACGGCTTCAAGCACGCTGGTCTTGCCGCTGCCGTTGGCGCCGTAAAGGATGTTGATGCGGGGGGAGGGTAAGAGTGTCACCGGGTGCAAGTTGCGCACCGCGGTGACAat < 2:2244558/143‑3 CTGCGAAATGAACGGGCCAGCCCGAGCAAATGCACGGCTTCAAGCACGCTGGTCTTGCCGCTGCCGTTGGCGCCGTAAAGGATGTTGATGCGGGGGGAGGGTAAGAGTGTCACCGGGTGCAAGTTGCGCACCGCGGTGACAat > 1:2244558/1‑141 CAGCCCGAGCAAATGCACGGCTTCAAGCACGCTGGTCTTGCCGCTGCCGTTGGCGCCGTAAAGGATGTTGATGCGGGGGGAGGGTAAGAGTGTCACCGGGTGCAAGTTGCGCACCGCGGT < 1:2405200/120‑1 CAGCCCGAGCAAATGCACGGCTTCAAGCACGCTGGTCTTGCCGCTGCCGTTGGCGCCGTAAAGGATGTTGATGCGGGGGGAGGGTAAGAGTGTCACCGGGTGCAAGTTGCGCACCGCGGT > 2:2405200/1‑120 ATGCGGGGGGAGGGTAAGAGTGTCACCGGGTGCAAGTTGCGCACCGCGGT > 1:1852571/1‑50 ATGCGGGGGGAGGGTAAGAGTGTCACCGGGTGCAAGTTGCGCACCGCGGT < 2:1852571/50‑1 CCGGGTGCAAGTTGCGCACCGCGGTGACACTCTTACCCTCCCCCCGCATCAACATCCTTTACGGCGCCAACGGCAGCGGCAAGAC < 1:2801472/85‑1 CCGGGTGCAAGTTGCGCACCGCGGTGACACTCTTACCCTCCCCCCGCATCAACATCCTTTACGGCGCCAACGGCAGCGGCAAGAC > 2:2801472/1‑85 CGGGTGCAAGTTGCGCACCGCGGTGACACTCTTACCCTCCCCCCGCATCAACATCCTTTACGGCGCCAACGGCAGCGGCAAGACCAGCGTGCTTGAAGCCGTGCATTTGCTCGGGCTGGCCCGTT < 2:2924909/125‑1 CGGGTGCAAGTTGCGCACCGCGGTGACACTCTTACCCTCCCCCCGCATCAACATCCTTTACGGCGCCAACGGCAGCGGCAAGACCAGCGTGCTTGAAGCCGTGCATTTGCTCGGGCTGGCCCGTT > 1:2924909/1‑125 AAGTTGCGCACCGCGGTGACCCTCTTACCCTCCCCCCGCATCAACATCCTTTACGGCGCCAACGGCAGCGGCAAGACCAGCGTGCTTGAAGCCGTGCATTTGCTCGGGCTGG > 2:132428/1‑112 AAGTTGCGCACCGCGGTGACCCTCTTACCCTCCCCCCGCATCAACATCCTTTACGGCGCCAACGGCAGCGGCAAGACCAGCGTGCTTGAAGCCGTGCATTTGCTCGGGCTGG < 1:132428/112‑1 AAGTTGCGCACCGCGGTGACACTCTTACCCTCCCCCCGCATCAACATCCTTTA > 1:1392124/1‑53 AAGTTGCGCACCGCGGTGACACTCTTACCCTCCCCCCGCATCAACATCCTTTA < 2:1392124/53‑1 CGGTGACACTCTTACCCTCCCCCCGCATCAACATCCTTTACGGCGCCAACGGCAGCGGCAAGACCAGCGTGCTTGAAGCCGTGCATTTGCTCGGGCTGGCCCGTTCATTTCGCAGCACCCGCCTGAATCCGGTTATTCAGTACGAACAGG < 1:1769457/150‑1 ACACTCTTACCCTCCCCCCGCATCAACATCCTTTACGGCGCCAACGGCAGCGGCAAGACCAGCGTGCTTGAAGCCGTGCATTTGCTCGGGCTGACCCGTTCATTTCGCAGCACCCGCCTGAATCCGGTTATTCAGTACGAACAGGCTGCC < 2:1983714/150‑1 ACACTCTTACCCTCCCCCCGCATCAACATCCTTTACGGCGCCAACGGCAGCGGCAACCCCCGCGTGCTTGCAATAGCGCATTTACTCTGGCTGGCCAGTTCATTTCGCAGCACCCGCCTGAATCCGGTTATTCAGTCCGAACAGGCTGCC > 1:373411/1‑150 CACTCTTACCCTCCCCCCGCATCAACATCCTTTACGGCGCCAACGGCAGCGGCAAGACCAGCGTGCTTGAAGCCGTGCATTTGCTCGGGCTGGCCCGTTCATTTCGCAGCACCCGCCTGAATCCGGTTATTCAGTACGAACAGGCTGCCT < 1:2747224/150‑1 CACTCTTACCCTCCCCCCGCATCAACATCCTTTACGGCGCCAACGGCAGCGGCAAGACCAGCGTGCTTGAAGCCGTGCATTTGCTCGGGCTGGCCCGTTCATTTCGCAGCACCCGCCTGAATCCGGTTATTCAGTACGAACAGGCTGCCT < 1:2073284/150‑1 GATTCAGGCGGGTGCTGCGAAATGAACGGGCCAGCCCGAGCAAATGCACGGCTTCAAGCACGCTGGTCTTGCCGCTGCCGTTGGCGCCGTAAAGGATGTTGATGCGGGGGGAGGGTAAGAGTGTCACCGGGTGCAAGTTGCGCACCGCGGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/12396‑12243‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgacACTCTTACCCTCCCCCCGCATCAACATCCTTTACGGCGCCAACGGCAGCGGCAAGACCAGCGTGCTTGAAGCCGTGCATTTGCTCGGGCTGGCCCGTTCATTTCGCAGCACCCGCCTGAATCCGGTTATTCAGTACGAACAGGCTGCCT > NC_002947/12275‑12423 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |