New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	199507 =	97 (0.850)	6 (0.050)	5/234	NT	6.1%	coding (5013/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	201464 =	92 (0.840)					coding (6970/26049 nt)	PP_0168	putative surface adhesion protein

CTTGGCCACCACTTCGTCGAGGGTGTCGGTGACTTGAACCGAAGCAGCACCGCCCAGCTCAAGGTTCTCGAATGCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGCCAGCGTCCTGATAGACGTCATCGCCTTGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/199660‑199507 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACC  >  NC_002947/201464‑201610                                                                                                                                                                                                                                                                                                               CTTGGCCACCACTTCGTCGAGGGTGTCGGTGACTTGAACCGAAGCAGCACCGCCCAGCTCAAGGTTCTCGAATGCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGCCAGCGTCCTGATAGACGTCATCGCCTTG                                                                                                                                                         >  2:2392200/1‑150      CCACCACTTCGTCGAGGGTGTCGGTGACTTGAACCGAAGCAGCACCGCCCAGCTCAAGGTTCTCGAATGCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGCCAGCGTCCTGATAGACGTCATCGCCTTGCGCGg                                                                                                                                                    >  1:3050671/1‑149                         GTCGGTGACTTGAACCGAAGCAGCACCGCCCAGCTCAAGGTTCGCGAATGCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGCCAGCGTCCTGATAGACGTCATCGCCTTGCGCGCCGTACACCCACGACGCGCA                                                                                                                                 >  1:3007160/1‑150                          TCGGTGACTTGAACCGCAGCACCACCGCCCAGCTCAAGGTTCTCGAATGCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGCCAGCGTCCTGATAGACGTCATCGCCTTGCGCGCCGTACACCCACGACGCGCAA                                                                                                                                <  2:3007160/150‑1                                  TTGAACCGAAGCAGCACCGCCCAGCTCAAGGTTCTCGAATGCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGCCAGCGTCCTGATAGACGTCATCGCCTTGC                                                                                                                                                        >  2:2443138/1‑118                                  TTGAACCGAAGCAGCACCGCCCAGCTCAAGGTTCTCGAATGCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGCCAGCGTCCTGATAGACGTCATCGCCTTGC                                                                                                                                                        <  1:1534459/118‑1                                  TTGAACCGAAGCAGCACCGCCCAGCTCAAGGTTCTCGAATGCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGCCAGCGTCCTGATAGACGTCATCGCCTTGC                                                                                                                                                        <  1:2443138/118‑1                                  TTGAACCGAAGCAGCACCGCCCAGCTCAAGGTTCTCGAATGCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGCCAGCGTCCTGATAGACGTCATCGCCTTGC                                                                                                                                                        >  2:1534459/1‑118                                                                          GCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCACGCTGATCTGGCCAGCGTCCTGATAGACGTCATCGCCTTGCGCGCCGTACACCCACGACGCGCAAGGCGA                                                                                                                           <  1:3012054/107‑1                                                                          GCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGCCAGCGTCCTGATAGACGTCATCGCCTTGCGCGCCGTACACCCACGACGCGCAAGGCGA                                                                                                                           >  2:3012054/1‑107                                                                          GCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGCCAGCGTCCTGATAGACGTCATCGCCTTGCGCGCCGTACACCCACGACGCGCAAGG                                                                                                                              >  2:1279882/1‑104                                                                          GCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGCCAGCGTCCTGATAGACGTCATCGCCTTGCGCGCCGTACACCCACGACGCGCAAGG                                                                                                                              <  1:1279882/104‑1                                                                                   GTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGCCAGCGTCCTGATAGACGTCATCGCCTTGC                                                                                                                                                        <  2:1792902/69‑1                                                                                   GTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGCCAGCGTCCTGATAGACGTCATCGCCTTGC                                                                                                                                                        >  1:1792902/1‑69                                                                                                                                                        GCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACC  <  1:2987352/150‑1                                                                                                                                                        GCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACC  <  2:1788531/150‑1                                                                                                                                                        GCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACC  >  1:1338013/1‑150                                                                                                                                                        GCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGC                                        >  2:1408235/1‑112                                                                                                                                                        GCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGC                                        <  1:1408235/112‑1                                                                                                                                                          GCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGA                                                >  1:267529/1‑102                                                                                                                                                          GCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGA                                                <  2:267529/102‑1                                                                                                                                                                                                                                                                                                               CTTGGCCACCACTTCGTCGAGGGTGTCGGTGACTTGAACCGAAGCAGCACCGCCCAGCTCAAGGTTCTCGAATGCAGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAAGCTGATCTGGCCAGCGTCCTGATAGACGTCATCGCCTTGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/199660‑199507 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACC  >  NC_002947/201464‑201610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.