BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	199507 =	97 (0.850)	6 (0.050)	5/234	NT	6.1%	coding (5013/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	201464 =	92 (0.840)	6 (0.050)	5/234	NT	6.1%	coding (6970/26049 nt)	PP_0168	putative surface adhesion protein

Only 100 of 116 total aligned reads displayed.

TGACCAGACTTCGGTAGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCAAGTCACCGACACCCTCGACGAAGTGGTGG  >  NC_002947/199360‑199655

ggtgtcggtcacttgaaccgaagcgttgccgcccagttgcaggttctcgaacgcagcaccagtggcgtccaccgccgagttgatgcccaagctgatctggccagcgtcctgatagacgtcatcgccttgcgcgtcgtgggtgtacggcgc                                                                                                                                                    <  2:1788531‑M1/3‑1 (MQ=255)

ggtgtcggtcacttgaaccgaagcgttgccgcccagttgcaggttctcgaacgcagcaccagtggcgtccaccgccgagttgatgcccaagctgatctggccagcgtcctgatagacgtcatcgccttgcgcgtcgtgggtgtacggcgc                                                                                                                                                    >  1:1338013‑M1/148‑150 (MQ=255)

ggtgtcggtcacttgaaccgaagcgttgccgcccagttgcaggttctcgaacgcagcaccagtggcgtccaccgccgagttgatgcccaagctgatctggccagcgtcctgatagacgtcatcgccttgcgcgtcgtgggtgtacggcgc                                                                                                                                                    <  1:2987352‑M1/3‑1 (MQ=255)

 gACCAGACTTCGGTAGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGAcgcg                                                                                                                                                   >  1:95113/1‑150 (MQ=255)

   ccAGACTTCGGTAGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCa                                                                                                                                                 >  1:1675184/1‑150 (MQ=255)

     aGACTTCGGTAGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCAAGACCTGGTTGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAg                                                                                                                                               >  1:411174/1‑150 (MQ=255)

      gACTTCGGTAGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTAGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAgg                                                                                                                                              >  2:742638/1‑150 (MQ=255)

         ttCGGGAGCCGCGAACGTCAAGCCTACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGTCGa                                                                                                                                           <  2:376875/150‑1 (MQ=255)

              tAGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGa                                                                                                                                           <  2:1749313/145‑1 (MQ=255)

              tAGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGa                                                                                                                                           >  1:1749313/1‑145 (MQ=255)

                   aagaACGTCAAGCCGACCTTCACCATGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTAt                                                                                                                                 <  1:3061470/149‑1 (MQ=255)

                    agaACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATc                                                                                                                                <  2:95113/150‑1 (MQ=255)

                        cGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGa                                                                                                                            <  2:2010811/150‑1 (MQ=40)

                         gTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTGAACATCACGGCTGGTGAGACCAGCGCGCCGTACACCCCCGACGCGCAAGGCGATGACGTCTATCAGGAc                                                                                                                           >  1:833658/1‑150 (MQ=255)

                         gTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGAc                                                                                                                           >  2:583894/1‑150 (MQ=255)

                          tCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACg                                                                                                                          >  2:1867196/1‑150 (MQ=255)

                                 gACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTCCATCGCAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCa                                                                                                                   <  2:1618727/150‑1 (MQ=14)

                                     ttCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATc                                                                                                               <  1:583894/150‑1 (MQ=255)

                                     ttCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCATGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCatacc                                                                                                               >  2:2192792/1‑146 (MQ=255)

                                      gcaggttctcgaacgcagcaccagtggcgtccaccgccgagttgatgcccaagctgatctggccagcgtcctgatagacgtcatcgccttgcgcgtcgtgggtgtacggcgc                                                                                                                                                    >  2:1408235‑M1/110‑112 (MQ=255)

                                      gcaggttctcgaacgcagcaccagtggcgtccaccgccgagttgatgcccaagctgatctggccagcgtcctgatagacgtcatcgccttgcgcgtcgtgggtgtacggcgc                                                                                                                                                    <  1:1408235‑M1/3‑1 (MQ=255)

                                        aCCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAACAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGc                                                                                                            >  1:1327033/1‑150 (MQ=255)

                                            tGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGCACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTgg                                                                                                        <  2:1308717/150‑1 (MQ=255)

                                            tGCACGTCAACCAGCCGCTAGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTgg                                                                                                        <  1:742638/150‑1 (MQ=255)

                                              tcgaacgcagcaccagtggcgtccaccgccgagttgatgcccaagctgatctggccagcgtcctgatagacgtcatcgccttgcgcgtcgtgggtgtacggc                                                                                                                                                      <  2:267529‑M1/1‑1 (MQ=255)

                                               aCGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCACGTGACCATCAAGGCAGGGGAGACTGGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCa                                                                                                     >  1:373895/1‑150 (MQ=14)

                                                 gTCCACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATc                                                                                                   <  1:2052737/150‑1 (MQ=255)

                                                 gTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATc                                                                                                   >  1:144540/1‑150 (MQ=255)

                                                   cAACCAGCCGCTGGCCCACGACCTGGTTGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCaa                                                                                                 >  1:1390664/1‑150 (MQ=255)

                                                     aCCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACt                                                                                               <  2:757130/150‑1 (MQ=255)

                                                     aCCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCACCGTACACCCACGACGCGCAAGGCGATGACGGCTATCAGGACGCGGGCCAGATAAGCTTGGGCATCAACt                                                                                               >  1:1397531/1‑150 (MQ=255)

                                                      ccAGCCGCTGGCCCACGACCTGGTTGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTc                                                                                              <  2:1390664/150‑1 (MQ=255)

                                                      ccAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTc                                                                                              >  1:2499108/1‑150 (MQ=255)

                                                      ccAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTc                                                                                              <  1:251853/150‑1 (MQ=255)

                                                       cAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTAt                                                                                                                                 <  1:2462300/114‑1 (MQ=40)

                                                       cAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTAt                                                                                                                                 >  2:2462300/1‑114 (MQ=255)

                                                         gCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATc                                                                                                   <  2:2196645/142‑1 (MQ=255)

                                                          ccGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACTCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTcggcg                                                                                          <  2:814359/150‑1 (MQ=255)

                                                          ccGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTcggcg                                                                                          <  2:1675184/150‑1 (MQ=255)

                                                                  ccACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGa                                                                                                                            >  1:733620/1‑108 (MQ=255)

                                                                     cGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCAc                                                                               <  2:55291/150‑1 (MQ=39)

                                                                      gACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACt                                                                              >  1:2392200/1‑150 (MQ=255)

                                                                       aCCTGGTCGTGACCATGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGAc                                                                                    <  1:2551868/143‑1 (MQ=255)

                                                                         cTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGt                                                                           >  2:948677/1‑150 (MQ=255)

                                                                               gTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTcggcg                                                                                          >  1:1705349/1‑129 (MQ=40)

                                                                               gTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTcggcg                                                                                          <  2:1705349/129‑1 (MQ=40)

                                                                                  aCCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTc                                                                  <  2:2120892/150‑1 (MQ=40)

                                                                                  aCCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTc                                                                  >  1:2120892/1‑150 (MQ=40)

                                                                                    ccTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCga                                                                <  2:833658/150‑1 (MQ=40)

                                                                                    ccTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCga                                                                >  1:1428078/1‑150 (MQ=255)

                                                                                    ccTGAACAACAACGCCCAAGTCACCATCAAGGCTGCTGAGACCAGCTCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCATGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTTGACGCCACTCGTGCTCCATTCga                                                                <  2:1450254/150‑1 (MQ=14)

                                                                                     cTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCgag                                                               >  2:2556934/1‑150 (MQ=255)

                                                                                     cTGAGCAACAACGACCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCgag                                                               >  2:2339500/1‑150 (MQ=255)

                                                                                      tcaGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCATCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCgaga                                                              <  1:2822198/148‑1 (MQ=255)

                                                                                           aacaacGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCtt                                                         <  1:1154673/150‑1 (MQ=255)

                                                                                           aacaacGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCtt                                                         >  1:239142/1‑150 (MQ=40)

                                                                                           aacaacGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCtt                                                         >  2:1154673/1‑150 (MQ=255)

                                                                                               acGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCTAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGc                                                     >  2:1268399/1‑150 (MQ=255)

                                                                                                 gCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTg                                                   >  1:1084756/1‑150 (MQ=255)

                                                                                                  cccAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTgg                                                  <  2:2222574/150‑1 (MQ=255)

                                                                                                   ccAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGAc                                                                                                                                       >  1:1771926/1‑64 (MQ=255)

                                                                                                   ccAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTggg                                                 >  1:1976970/1‑150 (MQ=255)

                                                                                                     aGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCg                                               >  1:309700/1‑150 (MQ=255)

                                                                                                      ggTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCa                                                                                                                   <  2:1106072/81‑1 (MQ=40)

                                                                                                      ggTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCa                                                                                                                   >  1:1106072/1‑81 (MQ=40)

                                                                                                          aCCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGtgct                                          >  1:2049485/1‑150 (MQ=255)

                                                                                                            cATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGtgctgc                                        <  2:239142/150‑1 (MQ=255)

                                                                                                            cATCAAGGCTGGTGAGACCAGCGCGCCGTACACCAACGAAGCGAACGCCAATGGCGGATAGCAGGACGCTGCCCAGATCAGCTTGGGCATGAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGtgctgc                                        >  1:2679654/1‑150 (MQ=17)

                                                                                                             aTCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTgg                                                                                                        >  2:2644875/1‑85 (MQ=40)

                                                                                                             aTCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTgg                                                                                                        <  1:2644875/85‑1 (MQ=40)

                                                                                                             aTCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTgctgct                                       >  1:1980211/1‑150 (MQ=255)

                                                                                                             aTCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTgctgct                                       <  1:962891/150‑1 (MQ=255)

                                                                                                                  ggCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCCGGGCGGTGCTGCTTCGGt                                  <  1:884987/150‑1 (MQ=255)

                                                                                                                    cTGGTGAGACCAGCGCGCCGGACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAGCCTTGAGCTGGGCGGTGCTGCTTCGGTTc                                <  2:373895/150‑1 (MQ=255)

                                                                                                                      ggTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCaa                              <  2:2049485/150‑1 (MQ=255)

                                                                                                                      ggTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTCGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCaa                              <  2:411174/150‑1 (MQ=255)

                                                                                                                       gTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTg                                                                                                         <  1:1296539/74‑1 (MQ=34)

                                                                                                                       gTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTg                                                                                                         >  2:1296539/1‑74 (MQ=35)

                                                                                                                            ccttgcgcgtcgtgggtgtacggCGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGtgctgc                                                                      <  1:1279882‑M1/81‑1 (MQ=255)

                                                                                                                            aCCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCAAGTCAcc                        <  1:957154/150‑1 (MQ=255)

                                                                                                                            aCCAGCGCGCCCTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACTTTGGCCTCAGCGGTGCTGCTTCGGTTGAAGTCAcc                        <  2:1333246/150‑1 (MQ=14)

                                                                                                                             ccAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCAAGTCACCg                       >  1:2755370/1‑150 (MQ=255)

                                                                                                                              ttgcgcgtcgtgggtgtacggCGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGGTGCTGCGGTTCAAGTCACCGa                      <  2:3007160‑M1/129‑1 (MQ=255)

                                                                                                                              cAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCAAGTCACCGa                      >  2:2557398/1‑150 (MQ=255)

                                                                                                                               tgcgcgtcgtgggtgtacggCGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGCGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCAAGTCACCGac                     >  1:3007160‑M1/21‑150 (MQ=255)

                                                                                                                                gcgcgcCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCaa                              >  1:1717660/1‑140 (MQ=255)

                                                                                                                                gcgcgcCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCaa                              <  2:1717660/140‑1 (MQ=255)

                                                                                                                                    gcCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCAAGTCACCGACACCCt                >  1:1689979/1‑150 (MQ=255)

                                                                                                                                      cGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCaa                              >  1:2129342/1‑134 (MQ=255)

                                                                                                                                      cGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCaa                              <  2:2129342/134‑1 (MQ=255)

                                                                                                                                             ccACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTggg                                                 <  1:2963471/108‑1 (MQ=255)

                                                                                                                                             ccACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTggg                                                 >  2:2963471/1‑108 (MQ=255)

                                                                                                                                             ccACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCAAGTCACCGACACCCTCGACGAAgt       >  1:1006171/1‑150 (MQ=255)

                                                                                                                                             ccACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCAAGTCACCGACACCCTCGACGAAgt       >  1:88099/1‑150 (MQ=255)

                                                                                                                                             ccACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTACTGCTTCGGTTCAAGTCACCGACACCCTCGACGAAgt       >  1:3012558/1‑150 (MQ=255)

                                                                                                                                             caacgacgCGCAAGGCGATGACGTCGATCAGGACGCTGGCCAGAGCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCAAGTCACCGACACCCTCGACGAAgt       >  2:40227/3‑150 (MQ=255)

                                                                                                                                              cACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTTGGCGGTGCTGCTTCGGTTCAAGTCACCGACACCCTCGACGAAgtg      <  2:2361514/150‑1 (MQ=255)

                                                                                                                                               acgacgCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCAAGTCACCGACACCCTCGACGAAgtgg     <  2:1006171/150‑1 (MQ=255)

                                                                                                                                                 gacgCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCAAGTCACCGACACCCTCGACGAAgtggtg   <  2:1372645/150‑1 (MQ=255)

                                                                                                                                                  cCGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCAAGTCACCGACACCCTCGACGAAGtggtgg  >  1:3050671‑M1/2‑150 (MQ=255)

TGACCAGACTTCGGTAGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCTGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCTGCATTCGAGAACCTTGAGCTGGGCGGTGCTGCTTCGGTTCAAGTCACCGACACCCTCGACGAAGTGGTGG  >  NC_002947/199360‑199655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.