| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 395240 | 133 (1.160) | 8 (0.070) | 8/232 | NT | 5.9% | coding (619/1200 nt) | fdhA | formaldehyde dehydrogenase |
| ? | NC_002947 | = 395249 | 131 (1.200) | coding (628/1200 nt) | fdhA | formaldehyde dehydrogenase | |||||
GACAAGGCCATGGAAAAGATCCGTGACCTGACCTGCCTGTCCGACATCCTGCCCACCGGCTATCACGGTGCCGTGACTGCTGGCGTTGGTCCAGGCAGCACTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCT‑‑‑CGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/395087‑395240‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgcCCAGCAGGCGCGCCGAGGCAGCGGCGGCCAGGCCGACCGGGCCAGCACCGGCAACGTAGACAGTGCTGCCTGGACCAACGCCAGCAGTCACGGCACCGTGATAGCCGGTGGGCAGGATGTCGGACAGGCAGGTCAGGTCACGGATCTTT < NC_002947/395249‑395101 GACAAGGCCATGGAAAAGATCCGTGACCTGACCTGCCTGTCCGACATCCTGCCCACCGGCTATCACGGTGCCGTGACTGCTGGCGTTGGTCCAGGCAGCACTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCT‑‑‑CG > 1:1765738/1‑150GACAAGGCCATGGAAAAGATCCGTGACCTGACCTGCCTGTCCGACATCCTGCCCACCGGCTATCACGGTGCCGTGACTGCTGGCGTTGGTCCAGGCAGCACTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCT‑‑‑CG > 1:355143/1‑150 ACAAGGCCATGGAAAAGATCCGTGACCTGACCTGCCTGTCCGACATCCTGCCCACCGGCTATCACGGTGCCGTGACTGCTGGCGTTGGTCCAGGCAGCACTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCT‑‑‑CGG > 1:200240/1‑150 CTGACCTGCCTGTCCGACATCCTGCCCACCGGCTATCACGGTGCCGTGACTGCTGGCGTTGGTCCAGGCAGCACTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCTCGGCGGCGCCCAGCAGGCGCGCCGAGGCA > 1:1065765/1‑150 CTGACCTGCCTGTCCGACATCCTGCCCACCGGCTATCACGGTGCCGTGACTGCTGGCGTTGGTCCAGGCAGCACTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCTCGGCGGCGCCCAGCAGGCGCGCCGAGGCA < 2:1065765/150‑1 ACGGTGCCGTGACTGCTGGCGTTGGTCCAGGCAGCACTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCT‑‑‑CGGCGC < 1:2618859/90‑1 ACGGTGCCGTGACTGCTGGCGTTGGTCCAGGCAGCACTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCT‑‑‑CGGCGC > 2:2618859/1‑90 CCGTGACTGCTGGCGTTGGTCCAGGCAGCACTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCT‑‑‑CG > 2:309125/1‑80 CCGTGACTGCTGGCGTTGGTCCAGGCAGCACTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCT‑‑‑CG < 1:309125/80‑1 TGGCGTTGGTCCAGGCAGCACTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCT‑‑‑CGGCGCCCAGCAGGCGCGCCGAG < 1:1582171/91‑1 TGGCGTTGGTCCAGGCAGCACTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCT‑‑‑CGGCGCCCAGCAGGCGCGCCGAG > 2:1582171/1‑91 GCAGCACTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCT‑‑‑CGGCGCCCAGCAGGCGCGCCG > 1:454617/1‑75 GCAGCACTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCT‑‑‑CGGCGCCCAGCAGGCGCGCCG < 2:454617/75‑1 CTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCT‑‑‑CGGCGCCCAGCAGGCGCGCCGA > 2:1229948/1‑70 CTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCT‑‑‑CGGCGCCCAGCAGGCGCGCCGA < 1:1229948/70‑1 GCGCCCAGCAGGCGCGCCGAGGCAGCGGCGGCCAGGCCGACCGGGCCAGCACCGGCAACGTAGACAGTGCTGCCTGGACCAACGCCAGCAGTCACGGCACCGTGATAGCCGGTGGGCAGGATGTCGGACAGGCAGGTCAGGTCACGGATC < 2:137111/150‑1 GCGCCCAGCAGGCGCGCCGAGGCAGCGGCGGCCAGGCCGACCGGGCCAGCACCGGCAACGTAGACAGTGCTGCCTGGACCAACGCCAGCAGTCACGGCACCGTGATAGCCGGTGGGCAGGATGTCGGACAGGCAGGTCAGGTCACGGATC > 2:2273414/1‑150 GCCCAGCAGGCGCGCCGAGGCAGCGGCGGCCAGGCCGACCGGGCCAGCACCGGCAACGTAGACAGTGCTGCCTGGACCAACGCCAGCAGTCACGGCACCGTGATAGCCGGTGGGCAGGATGTCGGACAGGCAGGTCAGGTCACGGATCTT > 2:1143010/1‑150 CCCAGCAGGCGCGCCGAGGCAGCGGCGGCCAGGCCGACCGGGCCAGCACCGGCAACGTAGACAGTGCTGCCTGGACCAACGCCAGCAGTCACGGCACCGTGATAGCCGGTGGGCAGGATGTCGGACAGGCAGGTCAGGTCACGGATCTTT < 1:1873198/150‑1 GACAAGGCCATGGAAAAGATCCGTGACCTGACCTGCCTGTCCGACATCCTGCCCACCGGCTATCACGGTGCCGTGACTGCTGGCGTTGGTCCAGGCAGCACTGTCTACGTTGCCGGTGCTGGCCCGGTCGGCCTGGCCGCCGCTGCCT‑‑‑CGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/395087‑395240‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgcCCAGCAGGCGCGCCGAGGCAGCGGCGGCCAGGCCGACCGGGCCAGCACCGGCAACGTAGACAGTGCTGCCTGGACCAACGCCAGCAGTCACGGCACCGTGATAGCCGGTGGGCAGGATGTCGGACAGGCAGGTCAGGTCACGGATCTTT < NC_002947/395249‑395101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |