| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 733469 = | 81 (0.710) | 13 (0.120) +TGTTTCAAAA |
12/224 | NT | 14.1% | intergenic (+3/‑2) | PP_t07/PP_t08 | tRNA‑Asn/tRNA‑Pro |
| ? | NC_002947 | 733635 = | 92 (0.800) | intergenic (+6/‑41) | PP_t09/PP_t10 | tRNA‑Lys/tRNA‑Pro | |||||
ATTCGAACTCCTGACATCCTGCTCCCAAAGCAGGCGCGCTACCGGACTGCGCTACACCCCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/733531‑733469‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCA > NC_002947/733635‑733783 |||||||||| ATTCGAACTCCTGACATCCTGCTCCCAAAGCAGGCGCGCTACCGGACTGCGCTACACCCCGAGTGTTTCAAAAAAAAGGGCATCTCAAAGAGATGCCCTTTT > 2:2466426/1‑102ATTCGAACTCCTGACATCCTGCTCCCAAAGCAGGCGCGCTACCGGACTGCGCTACACCCCGAGTGTTTCAAAAAAAAGGGCATCTCAAAGAGATGCCCTTTT < 1:2466426/102‑1 TCCCAAAGCAGGCGCGCTACCGGACTGCGCTACACCCCGAGTGTTTCAAAAAAAAGGGCATCTCAAAGAGATGCCC > 2:2976999/1‑76 TCCCAAAGCAGGCGCGCTACCGGACTGCGCTACACCCCGAGTGTTTCAAAAAAAAGGGCATCTCAAAGAGATGCCC < 1:2976999/76‑1 CCAAAGCAGGCGCGCTACCGGCCTGCTCTACACCCCGAGTGTTTCAAAAAAAAGGGCAT < 1:1466583/59‑1 CCAAAGCAGGCGCGCTACCGGACTGCGCTACACCCCGAGTGTTTCAAAAAAAAGGGCATCTCAAAGAGATGCCC < 1:1370744/74‑1 CCAAAGCAGGCGCGCTACCGGACTGCGCTACACCCCGAGTGTTTCAAAAAAAAGGGCATCTCAAAGAGATGCCC > 2:1370744/1‑74 CCAAAGCAGGCGCGCTACCGGACTGCGCTACACCCCGAGTGTTTCAAAAAAAAGGGCATCTCAAAGAGATGCC > 2:823869/1‑73 CCAAAGCAGGCGCGCTACCGGACTGCGCTACACCCCGAGTGTTTCAAAAAAAAGGGCATCTCAAAGAGATGCC < 1:823869/73‑1 CCAAAGCAGGCGCGCTACCGGACTGCGCTACACCCCGAGTGTTTCAAAAAAAAGGGCAT > 2:1466583/1‑59 CAAAGCAGGCGCGCTACCGGACTGCGCTACACCCCGAGTGTTTCAAAAAAAAGGGCATCTCAAAGAGATGCCCTTT > 2:191407/1‑76 CAAAGCAGGCGCGCTACCGGACTGCGCTACACCCCGAGTGTTTCAAAAAAAAGGGCATCTCAAAGAGATGCCCTTT < 1:191407/76‑1 CAAAGCAGGCGCGCTACCGGACTGCGCTACACCCCGAGTGT > 1:2937219/1‑41 CCCCGAGTGTTTCAAAAAAAAGGGCATCTCTTTGAGATGCCCTTTTCTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAG > 2:2329752/1‑150 CCGAGTGTTTCAAAAAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGA > 2:1358103/1‑50 CCGAGTGTTTCAAAAAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGA < 1:1358103/50‑1 GTGTTTCAAAAAAAAGGGCATCTCTTTGAGATGCCCTTTTCTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGT < 1:2329752/150‑1 AAAAAAAGGGCATCTCTTTGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAG > 2:2291744/1‑150 AAAAAGGGCATCTCTTTGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCA < 1:2291744/150‑1 |||||||||| ATTCGAACTCCTGACATCCTGCTCCCAAAGCAGGCGCGCTACCGGACTGCGCTACACCCCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/733531‑733469‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCA > NC_002947/733635‑733783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |