| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1436044 | 114 (1.000) | 10 (0.090) | 8/228 | NT | 8.3% | intergenic (‑74/+79) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase |
| ? | NC_002947 | = 1436081 | 114 (1.070) | intergenic (‑111/+42) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase | |||||
GGTCGATGGCACGGATGGCGTCGCGGCTGCCGGTTACCGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1435895‑1436044‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcgaa‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGGTCGTAATCCCCCCCATGCATCTGCATTAGATTTCCAAGGAGGCTACATGCCCCTCACAGGCAACCTGCTGATCGGCCAGA < NC_002947/1436081‑1435937 GGTCGATGGCACGGATGGCGTCGCGGCTGCCGGTTACCGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAA > 2:726605/1‑150GGTCGATGGCACGGATGGCGTCGCGGCTGCCGGTTACCGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAA < 1:2737994/150‑1 GTCGCGGCTGCCGGTTACCGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAA‑TCAGGCGACCCGGTGCATG > 1:1973990/1‑150 ATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAAC < 2:1973990/150‑1 CTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTGGGAGCGGGCGTGCCCGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGG > 2:672374/1‑150 CTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTGGGAGCGGGCGTGCCCGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGG > 1:1757599/1‑150 TGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTGGGAGCGGGCGTGCCCGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGGT < 1:672374/150‑1 TGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTGGGAGCGGGCGTGCCCGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGGT < 2:1757599/150‑1 GGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGG < 1:2010603/124‑1 GGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGG > 2:2010603/1‑124 TTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGACCCGGTGCATGGCAC < 1:2350616/58‑1 TTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGACCCGGTGCATGGCAC > 2:2350616/1‑58 CCGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGGTCGTAATCCCCCCCATGCATCTGCATTAGATTTCCAAGGAGGCTACATGCCCCTCACAGGCAACCTGCTGATCGGCCA < 1:97706/150‑1 CCGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGGTCGTAATCCCCCCCATGCATCTGCATTAGAT > 1:2882257/1‑103 CCGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGGTCGTAATCCCCCCCATGCATCTGCATTAGAT < 2:2882257/103‑1 CGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGGTCGTAATCCCCCCCATGCATCTGCATTAGATTTCCAAGGAGGCTACATGCCCCTCACAGGCAACCTGCTGATCGGCCAG > 1:2392513/1‑150 CGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGGTCGTAATCCCCCCCATGCATCTGCATTAGATTTCCAAGGAGGCTACATGCCCCTCACAGGCAACCTGCTGATCGGCCAG > 2:2550799/1‑150 GCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGGTCGTAATCCCCCCCATGCATCTGCATTAGATTTCCAAGGAGGCTACATGCCCCTCACAGGCAACCTGCTGATCGGCCtct > 2:723632/1‑147 GCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGGTCGTAATCCCCCCCATGCATCTGCATTAGATTTCCAAGGAGG > 2:1240693/1‑112 GCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGGTCGTAATCCCCCCCATGCATCTGCATTAGATTTCCAAGGAGG < 1:1240693/112‑1 A‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGGTCGTAATCCCCCCCATGCATCTGCATTAGATTTCCAAGGAGG > 1:825853/1‑108 A‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGGTCGTAATCCCCCCCATGCATCTGCATTAGATTTCCAAGGAGG < 2:825853/108‑1 GGTCGATGGCACGGATGGCGTCGCGGCTGCCGGTTACCGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1435895‑1436044‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcgaa‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGGTCGTAATCCCCCCCATGCATCTGCATTAGATTTCCAAGGAGGCTACATGCCCCTCACAGGCAACCTGCTGATCGGCCAGA < NC_002947/1436081‑1435937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |