New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1768942	93 (0.810)	5 (0.050)	5/232	NT	5.1%	coding (25/381 nt)	PP_5475	hypothetical protein
	?	NC_002947	= 1768952	97 (0.890)					coding (35/381 nt)	PP_5475	hypothetical protein

CTTCAAGATCAAGGGCGGCTCCGTTACGGCTGCCCAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1768789‑1768942 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctcgACGTAGGCGCCGAGGGTGTATTTATCGATGTTCATAGGTAGCGCAGCCCTGGGAATTCGTTGAGGTTGTACGTATTGCGTGGCCACCGGGTATCGAGCAGGTCGAAGTAGCCGGCGGTCACCGAGACCTGGGCAGCCGTAACGGAG  <  NC_002947/1768952‑1768807                                                                                                                                                                                                                                                                                                              CTTCAAGATCAAGGGCGGCTCCGTTACGGCTGCCCAGGTCTCGGTGACCGCCGTCTCCTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCCGGGCTGCGCGACATATGAACATCGATAAATACACC                                                                                                                                                        >  2:1173736/1‑150   TCAAGATCAAGGGCGGCTCCGTTACGGCTGCCCAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGAGCTACCTATGAACATGGATATAAACACCCT                                                                                                                                                      >  1:3050856/1‑150                      CGTTACGGCTGCCCAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGACGTAGGCGCCGAGGGT                                                                                                                                   <  2:1973258/150‑1                                       TCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACAC                                                                                                                                                         >  1:2071248/1‑111                                       TCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACAC                                                                                                                                                         <  2:2071248/111‑1                                                                                                                                 TATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGTGTATTTATCGATGTTCATAGGTAGCGCAGCCCTGGGAATTCGTTGAGGTTGTACGTATTGCGTGGCCACCGGGTATCGAGCAGGTCGAAGTAGCCGGCGGTCA                            >  1:1394642/1‑146                                                                                                                                 TATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGTGTATTTATCGATGTTCATAGGTAGCGCAGCCCTGGGAATTCGTTGAGGTTGTACGTATTGCGTGGCCACCGGGTATCGAGCAGGTCGAAGTAGCCGGCGGTCA                            <  2:1394642/146‑1                                                                                                                                            ATAAATACACCCTCGGCGCCTACGTCGAGGGTGTATTTATCGATGTTCATAGGTAGCGCAGCCCTGGGAATTCGTTGAGGTTGTACGTATTGCGTGGCCACCGGGTATCGAGC                                                  <  1:1965791/113‑1                                                                                                                                            ATAAATACACCCTCGGCGCCTACGTCGAGGGTGTATTTATCGATGTTCATAGGTAGCGCAGCCCTGGGAATTCGTTGAGGTTGTACGTATTGCGTGGCCACCGGGTATCGAGC                                                  >  2:1965791/1‑113                                                                                                                                                      CCTCGACGTAGGCGCCGAGGGTGTATTTATCGATGTTCATAGGTAGCGCAGCCCTGGGACTACGTTGAGGTCGCGGGCATGGCGTGGCCACCGGGTATCGAGCAGGTCGAAGTAGCCGGCGGTCACCGAGACCTGGGCAGCCGTAACGGA   >  1:2675147/1‑150                                                                                                                                                      CCTCGACGTAGGCGCCGAGGGTGTATTTATCGATGTTCATAGGTAGCGCAGCCCTGGGAATTCGTTGAGGTTGTACGTATTGCGTGGCCACCGGGTATCGAGCAGGTCGAAGTAGCCGGCGGTCACCGAGACCTGGGCAGCCGTAACGGA   >  1:1245272/1‑150                                                                                                                                                      CCTCGACGTAGGCGCCGAGGGTGTATTTATCGATGTTCATAGGTAGCGCAGCCCTGGGAATTCGTTGAGGTTGTACGTATTGCGTGGCCACCGG                                                           <  1:1800863/94‑1                                                                                                                                                      CCTCGACGTAGGCGCCGAGGGTGTATTTATCGATGTTCATAGGTAGCGCAGCCCTGGGAATTCGTTGAGGTTGTACGTATTGCGTGGCCACCGG                                                           >  2:1800863/1‑94                                                                                                                                                       CTCGACGTAGGCGCCGAGGGTGTATTTATCGATGCTCATAGGTAGCGCAGCCCTGGGAATTCGTTGAGGTTGTACGTATTGCGTGGCCACCGGGTATCGAGCAGGTCGAAGTAGCCGGCGGTCACCGAGACCTGGGCAGCCGTAACGtgg  >  2:960543/1‑147                                                                                                                                                                                                                                                                                                              CTTCAAGATCAAGGGCGGCTCCGTTACGGCTGCCCAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1768789‑1768942 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctcgACGTAGGCGCCGAGGGTGTATTTATCGATGTTCATAGGTAGCGCAGCCCTGGGAATTCGTTGAGGTTGTACGTATTGCGTGGCCACCGGGTATCGAGCAGGTCGAAGTAGCCGGCGGTCACCGAGACCTGGGCAGCCGTAACGGAG  <  NC_002947/1768952‑1768807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.